RNA–Protein interactions for RNA: ENST00000539479.5

MDM2-225, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 845 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-225ENST00000539479 AEBP2Q6ZN18 517 aaPredicted RBP19.54■□□□□ 0.72
MDM2-225ENST00000539479 CHIC1Q5VXU3 224 aa18.43■□□□□ 0.54
MDM2-225ENST00000539479 SENP3Q9H4L4 574 aaPredicted RBP16.87■□□□□ 0.29
MDM2-225ENST00000539479 PHF23Q9BUL5 403 aaPredicted RBP16.53■□□□□ 0.24
MDM2-225ENST00000539479 FOXD1Q16676 465 aa15.67■□□□□ 0.1
MDM2-225ENST00000539479 POTEDQ86YR6 584 aa15.24■□□□□ 0.03
MDM2-225ENST00000539479 MSH5O43196 834 aa14.91□□□□□ -0.02
MDM2-225ENST00000539479 NISCHQ9Y2I1 1504 aa14.67□□□□□ -0.06
MDM2-225ENST00000539479 PIAS4Q8N2W9 510 aaPredicted RBP14.65□□□□□ -0.06
MDM2-225ENST00000539479 PLPPR3Q6T4P5 718 aa14.52□□□□□ -0.09
MDM2-225ENST00000539479 PPP6R1Q9UPN7 881 aa14.33□□□□□ -0.12
MDM2-225ENST00000539479 ADRA2BP18089 450 aa14.32□□□□□ -0.12
MDM2-225ENST00000539479 DMRT2Q9Y5R5 561 aa13.28□□□□□ -0.28
MDM2-225ENST00000539479 SCAF1Q9H7N4 1312 aaKnown RBP13.23□□□□□ -0.29
MDM2-225ENST00000539479 MAPK8IP2Q13387 824 aaPredicted RBP13.22□□□□□ -0.29
MDM2-225ENST00000539479 CACNB1Q02641 598 aaPredicted RBP13.01□□□□□ -0.33
MDM2-225ENST00000539479 DCAF8L1A6NGE4 600 aa12.85□□□□□ -0.35
MDM2-225ENST00000539479 CCDC180Q9P1Z9 1646 aa12.79□□□□□ -0.36
MDM2-225ENST00000539479 PPP4R3CPQ6ZMV5 832 aa12.64□□□□□ -0.39
MDM2-225ENST00000539479 HOXD11P31277 338 aaPredicted RBP12.62□□□□□ -0.39
MDM2-225ENST00000539479 RNF39Q9H2S5 420 aa12.62□□□□□ -0.39
MDM2-225ENST00000539479 CNKSR2Q8WXI2 1034 aa12.51□□□□□ -0.41
MDM2-225ENST00000539479 RNF216Q9NWF9 866 aaPredicted RBP12.48□□□□□ -0.41
MDM2-225ENST00000539479 C1QBPQ07021 282 aaKnown RBP12.47□□□□□ -0.41
MDM2-225ENST00000539479 ZCCHC6Q5VYS8 1495 aaKnown RBP12.34□□□□□ -0.43
MDM2-225ENST00000539479 DNAJC5BQ9UF47 199 aa12.28□□□□□ -0.44
MDM2-225ENST00000539479 ABCC9O60706 1549 aa12.17□□□□□ -0.46
MDM2-225ENST00000539479 NCBP3Q53F19 620 aaKnown RBP12.15□□□□□ -0.46
MDM2-225ENST00000539479 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.14□□□□□ -0.472e-8■■□□□ 11.8
MDM2-225ENST00000539479 DCAF1Q9Y4B6 1507 aa12.11□□□□□ -0.47
MDM2-225ENST00000539479 MYO15BQ96JP2 1530 aa12□□□□□ -0.49
MDM2-225ENST00000539479 DCAF8L2P0C7V8 631 aa11.96□□□□□ -0.49
MDM2-225ENST00000539479 NACADO15069 1562 aa11.91□□□□□ -0.5
MDM2-225ENST00000539479 SHROOM4Q9ULL8 1493 aa11.88□□□□□ -0.51
MDM2-225ENST00000539479 NPM3O75607 178 aaKnown RBP11.86□□□□□ -0.51
MDM2-225ENST00000539479 RB1CC1Q8TDY2 1594 aa11.8□□□□□ -0.52
MDM2-225ENST00000539479 SCRIBQ14160 1630 aa11.78□□□□□ -0.52
MDM2-225ENST00000539479 CAPN15O75808 1086 aa11.77□□□□□ -0.53
MDM2-225ENST00000539479 POTEHQ6S545 545 aa11.77□□□□□ -0.53
MDM2-225ENST00000539479 U3KPZ7 1027 aaPredicted RBP11.74□□□□□ -0.53
MDM2-225ENST00000539479 DSG3P32926 999 aa11.69□□□□□ -0.54
MDM2-225ENST00000539479 UNC13AQ9UPW8 1703 aa11.67□□□□□ -0.54
MDM2-225ENST00000539479 SPINK5Q9NQ38 1064 aaPredicted RBP11.67□□□□□ -0.54
MDM2-225ENST00000539479 BICRAQ9NZM4 1560 aa11.61□□□□□ -0.55
MDM2-225ENST00000539479 APLP2Q06481 763 aa11.56□□□□□ -0.56
MDM2-225ENST00000539479 TRHP20396 242 aaPredicted RBP11.48□□□□□ -0.57
MDM2-225ENST00000539479 ZNF219Q9P2Y4 722 aaPredicted RBP11.47□□□□□ -0.57
MDM2-225ENST00000539479 CECR2Q9BXF3 1484 aa11.46□□□□□ -0.57
MDM2-225ENST00000539479 PABPN1Q86U42 306 aaKnown RBP eCLIP11.46□□□□□ -0.57
MDM2-225ENST00000539479 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.42□□□□□ -0.58
MDM2-225ENST00000539479 ABCB7O75027 752 aa11.42□□□□□ -0.58
MDM2-225ENST00000539479 HNRNPUL2Q1KMD3 747 aaKnown RBP11.42□□□□□ -0.58
MDM2-225ENST00000539479 MROH2BQ7Z745 1585 aa11.37□□□□□ -0.59
MDM2-225ENST00000539479 RSF1Q96T23 1441 aaPredicted RBP11.37□□□□□ -0.59
MDM2-225ENST00000539479 SLC4A2P04920 1241 aa11.37□□□□□ -0.59
MDM2-225ENST00000539479 SUPT5HO00267 1087 aaKnown RBP11.32□□□□□ -0.6
MDM2-225ENST00000539479 KCNA4P22459 653 aa11.32□□□□□ -0.6
MDM2-225ENST00000539479 SAMD1Q6SPF0 538 aaPredicted RBP11.31□□□□□ -0.6
MDM2-225ENST00000539479 SMARCA4P51532 1647 aa11.29□□□□□ -0.6
MDM2-225ENST00000539479 RBM42Q9BTD8 480 aaKnown RBP11.28□□□□□ -0.6
MDM2-225ENST00000539479 BAZ1AQ9NRL2 1556 aaPredicted RBP11.27□□□□□ -0.61
MDM2-225ENST00000539479 WIZO95785 1651 aa11.25□□□□□ -0.61
MDM2-225ENST00000539479 EIF4G1Q04637 1599 aaKnown RBP11.17□□□□□ -0.62
MDM2-225ENST00000539479 PEG3Q9GZU2 1588 aa11.17□□□□□ -0.62
MDM2-225ENST00000539479 ATAD2BQ9ULI0 1458 aa11.13□□□□□ -0.63
MDM2-225ENST00000539479 CHRDL2Q6WN34 429 aa11.12□□□□□ -0.63
MDM2-225ENST00000539479 TOP2AP11388 1531 aaKnown RBP11.1□□□□□ -0.63
MDM2-225ENST00000539479 MYCNP04198 464 aaPredicted RBP11.05□□□□□ -0.64
MDM2-225ENST00000539479 SMARCA2P51531 1590 aa11.05□□□□□ -0.64
MDM2-225ENST00000539479 POLA2Q14181 598 aa11.05□□□□□ -0.64
MDM2-225ENST00000539479 NCAPD3P42695 1498 aa11.03□□□□□ -0.64
MDM2-225ENST00000539479 CC2D2AQ9P2K1 1620 aa11.02□□□□□ -0.64
MDM2-225ENST00000539479 CCDC88BA6NC98 1476 aa11□□□□□ -0.65
MDM2-225ENST00000539479 HMGXB3Q12766 1538 aa11□□□□□ -0.65
MDM2-225ENST00000539479 BAZ1BQ9UIG0 1483 aaKnown RBP11□□□□□ -0.65
MDM2-225ENST00000539479 ZBTB12Q9Y330 459 aaPredicted RBP10.91□□□□□ -0.66
MDM2-225ENST00000539479 AKT1S1Q96B36 256 aa10.9□□□□□ -0.66
MDM2-225ENST00000539479 SP7Q8TDD2 431 aaPredicted RBP10.88□□□□□ -0.67
MDM2-225ENST00000539479 CFTRP13569 1480 aa10.77□□□□□ -0.69
MDM2-225ENST00000539479 REM2Q8IYK8 340 aaPredicted RBP10.76□□□□□ -0.69
MDM2-225ENST00000539479 ABCC8Q09428 1581 aa10.76□□□□□ -0.69
MDM2-225ENST00000539479 PIP4P2Q8N4L2 257 aa10.74□□□□□ -0.69
MDM2-225ENST00000539479 OSCARQ8IYS5 282 aa10.73□□□□□ -0.69
MDM2-225ENST00000539479 FOXD4L1Q9NU39 408 aa10.73□□□□□ -0.69
MDM2-225ENST00000539479 NESP48681 1621 aa10.73□□□□□ -0.69
MDM2-225ENST00000539479 CADPSQ9ULU8 1353 aa10.72□□□□□ -0.69
MDM2-225ENST00000539479 HAX1O00165 279 aa10.7□□□□□ -0.7
MDM2-225ENST00000539479 ATF5Q9Y2D1 282 aaPredicted RBP10.69□□□□□ -0.7
MDM2-225ENST00000539479 SLC4A1APQ9BWU0 796 aaKnown RBP10.68□□□□□ -0.7
MDM2-225ENST00000539479 SYNJ1O43426 1573 aa10.68□□□□□ -0.7
MDM2-225ENST00000539479 PRDM2Q13029 1718 aa10.67□□□□□ -0.7
MDM2-225ENST00000539479 PITPNM1O00562 1244 aa10.65□□□□□ -0.7
MDM2-225ENST00000539479 WRNQ14191 1432 aaPredicted RBP eCLIP10.64□□□□□ -0.71
MDM2-225ENST00000539479 CUX1P39880 1505 aa10.63□□□□□ -0.71
MDM2-225ENST00000539479 LAMC3Q9Y6N6 1575 aa10.62□□□□□ -0.71
MDM2-225ENST00000539479 FXR2P51116 673 aaKnown RBP eCLIP10.6□□□□□ -0.71
MDM2-225ENST00000539479 TRIM41Q8WV44 630 aa10.6□□□□□ -0.71
MDM2-225ENST00000539479 FANCD2Q9BXW9 1451 aa10.6□□□□□ -0.71
MDM2-225ENST00000539479 TOP2BQ02880 1626 aa10.59□□□□□ -0.71
MDM2-225ENST00000539479 BIVM-ERCC5R4GMW8 1640 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms