RNA–Protein interactions for RNA: ENST00000539382.5

CTCFL-212, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,262 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-212ENST00000539382 IFT57Q9NWB7 429 aa14.39□□□□□ -0.11
CTCFL-212ENST00000539382 CFAP44Q96MT7 982 aa14.38□□□□□ -0.11
CTCFL-212ENST00000539382 TNNQ9UQP3 1299 aa14.38□□□□□ -0.11
CTCFL-212ENST00000539382 TSPYL6Q8N831 410 aa14.38□□□□□ -0.11
CTCFL-212ENST00000539382 HAP1P54257 671 aaPredicted RBP14.37□□□□□ -0.11
CTCFL-212ENST00000539382 COL18A1P39060 1754 aa14.37□□□□□ -0.11
CTCFL-212ENST00000539382 ERBB3P21860 1342 aa14.37□□□□□ -0.11
CTCFL-212ENST00000539382 GNAI1P63096 354 aa14.36□□□□□ -0.11
CTCFL-212ENST00000539382 KIAA0232Q92628 1395 aa14.36□□□□□ -0.11
CTCFL-212ENST00000539382 CRB1P82279 1406 aa14.36□□□□□ -0.11
CTCFL-212ENST00000539382 CALD1Q05682 793 aaKnown RBP14.36□□□□□ -0.11
CTCFL-212ENST00000539382 SSH1Q8WYL5 1049 aa14.36□□□□□ -0.11
CTCFL-212ENST00000539382 FRAT1Q92837 279 aaPredicted RBP14.36□□□□□ -0.11
CTCFL-212ENST00000539382 ELL2O00472 640 aaPredicted RBP14.35□□□□□ -0.11
CTCFL-212ENST00000539382 GAS2L2Q8NHY3 880 aa14.35□□□□□ -0.11
CTCFL-212ENST00000539382 NCAPD2Q15021 1401 aa14.35□□□□□ -0.11
CTCFL-212ENST00000539382 MYCNP04198 464 aaPredicted RBP14.35□□□□□ -0.11
CTCFL-212ENST00000539382 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.35□□□□□ -0.11
CTCFL-212ENST00000539382 C8orf58Q8NAV2 365 aa14.35□□□□□ -0.11
CTCFL-212ENST00000539382 MIS18AQ9NYP9 233 aa14.35□□□□□ -0.11
CTCFL-212ENST00000539382 NHSL1Q5SYE7 1610 aa14.34□□□□□ -0.11
CTCFL-212ENST00000539382 CHL1O00533 1208 aa14.34□□□□□ -0.11
CTCFL-212ENST00000539382 CT47B1P0C2W7 299 aaPredicted RBP14.34□□□□□ -0.11
CTCFL-212ENST00000539382 KRT24Q2M2I5 525 aa14.34□□□□□ -0.11
CTCFL-212ENST00000539382 IL17REQ8NFR9 667 aa14.34□□□□□ -0.11
CTCFL-212ENST00000539382 PANK1Q8TE04 598 aa14.34□□□□□ -0.11
CTCFL-212ENST00000539382 CCDC136Q96JN2 1154 aa14.34□□□□□ -0.11
CTCFL-212ENST00000539382 VAMP4O75379 141 aa14.34□□□□□ -0.11
CTCFL-212ENST00000539382 RLBP1P12271 317 aa14.34□□□□□ -0.11
CTCFL-212ENST00000539382 CPDO75976 1380 aa14.33□□□□□ -0.11
CTCFL-212ENST00000539382 GNAT3A8MTJ3 354 aa14.33□□□□□ -0.12
CTCFL-212ENST00000539382 SMC4Q9NTJ3 1288 aa14.32□□□□□ -0.12
CTCFL-212ENST00000539382 CAMTA1Q9Y6Y1 1673 aa14.32□□□□□ -0.12
CTCFL-212ENST00000539382 RTF1Q92541 710 aaKnown RBP14.32□□□□□ -0.12
CTCFL-212ENST00000539382 LMO7Q8WWI1 1683 aa14.31□□□□□ -0.12
CTCFL-212ENST00000539382 MAP3K5Q99683 1374 aa14.31□□□□□ -0.12
CTCFL-212ENST00000539382 ROBO1Q9Y6N7 1651 aa14.31□□□□□ -0.12
CTCFL-212ENST00000539382 TCERG1O14776 1098 aaKnown RBP14.31□□□□□ -0.12
CTCFL-212ENST00000539382 PDE3AQ14432 1141 aa14.31□□□□□ -0.12
CTCFL-212ENST00000539382 CLUAP1Q96AJ1 413 aa14.31□□□□□ -0.12
CTCFL-212ENST00000539382 HTATSF1O43719 755 aaKnown RBP14.3□□□□□ -0.12
CTCFL-212ENST00000539382 CANXP27824 592 aaKnown RBP14.3□□□□□ -0.12
CTCFL-212ENST00000539382 TWISTNBQ3B726 338 aaPredicted RBP14.3□□□□□ -0.12
CTCFL-212ENST00000539382 NLRP2Q9NX02 1062 aa14.3□□□□□ -0.12
CTCFL-212ENST00000539382 COG6Q9Y2V7 657 aa14.3□□□□□ -0.12
CTCFL-212ENST00000539382 LGR6Q9HBX8 967 aa14.3□□□□□ -0.12
CTCFL-212ENST00000539382 PRDM11Q9NQV5 511 aa14.29□□□□□ -0.12
CTCFL-212ENST00000539382 NOB1Q9ULX3 412 aaKnown RBP14.29□□□□□ -0.12
CTCFL-212ENST00000539382 ABCA3Q99758 1704 aa14.29□□□□□ -0.12
CTCFL-212ENST00000539382 LRRC37A3O60309 1634 aa14.29□□□□□ -0.12
CTCFL-212ENST00000539382 FAM208AQ9UK61 1670 aaKnown RBP14.28□□□□□ -0.12
CTCFL-212ENST00000539382 TRIM27P14373 513 aa14.28□□□□□ -0.12
CTCFL-212ENST00000539382 MYT1Q01538 1121 aa14.28□□□□□ -0.12
CTCFL-212ENST00000539382 CSB-PGBD3P0DP91 1061 aa14.27□□□□□ -0.12
CTCFL-212ENST00000539382 ALDH1L2Q3SY69 923 aa14.27□□□□□ -0.12
CTCFL-212ENST00000539382 ZNF530Q6P9A1 599 aaPredicted RBP14.27□□□□□ -0.12
CTCFL-212ENST00000539382 CEMIPQ8WUJ3 1361 aa14.27□□□□□ -0.12
CTCFL-212ENST00000539382 PLEKHO1Q53GL0 409 aaPredicted RBP14.27□□□□□ -0.13
CTCFL-212ENST00000539382 ZKSCAN2Q63HK3 967 aa14.27□□□□□ -0.13
CTCFL-212ENST00000539382 TSPYL4Q9UJ04 414 aa14.27□□□□□ -0.13
CTCFL-212ENST00000539382 MPRIPQ6WCQ1 1025 aa14.26□□□□□ -0.13
CTCFL-212ENST00000539382 MRPL50Q8N5N7 158 aaKnown RBP14.26□□□□□ -0.13
CTCFL-212ENST00000539382 MEGF6O75095 1541 aa14.26□□□□□ -0.13
CTCFL-212ENST00000539382 ABCC6O95255 1503 aa14.26□□□□□ -0.13
CTCFL-212ENST00000539382 AMOTQ4VCS5 1084 aa14.25□□□□□ -0.13
CTCFL-212ENST00000539382 AKAP4Q5JQC9 854 aa14.25□□□□□ -0.13
CTCFL-212ENST00000539382 ATF7IPQ6VMQ6 1270 aa14.25□□□□□ -0.13
CTCFL-212ENST00000539382 ZNF428Q96B54 188 aa14.25□□□□□ -0.13
CTCFL-212ENST00000539382 BRPF1P55201 1214 aaPredicted RBP14.25□□□□□ -0.13
CTCFL-212ENST00000539382 AHDC1Q5TGY3 1603 aaPredicted RBP14.24□□□□□ -0.13
CTCFL-212ENST00000539382 TAF7Q15545 349 aaPredicted RBP14.24□□□□□ -0.13
CTCFL-212ENST00000539382 DZIP1LQ8IYY4 767 aaKnown RBP14.24□□□□□ -0.13
CTCFL-212ENST00000539382 COL5A2P05997 1499 aaPredicted RBP14.24□□□□□ -0.13
CTCFL-212ENST00000539382 RAPGEF4Q8WZA2 1011 aa14.24□□□□□ -0.13
CTCFL-212ENST00000539382 RBM19Q9Y4C8 960 aaKnown RBP14.24□□□□□ -0.13
CTCFL-212ENST00000539382 WDR17Q8IZU2 1322 aa14.23□□□□□ -0.13
CTCFL-212ENST00000539382 RNMTO43148 476 aaKnown RBP14.22□□□□□ -0.13
CTCFL-212ENST00000539382 PIP4K2BP78356 416 aa14.22□□□□□ -0.13
CTCFL-212ENST00000539382 KIF16BQ96L93 1317 aa14.22□□□□□ -0.13
CTCFL-212ENST00000539382 KCNQ3O43525 872 aa14.22□□□□□ -0.13
CTCFL-212ENST00000539382 C1orf141Q5JVX7 400 aa14.22□□□□□ -0.13
CTCFL-212ENST00000539382 MVPQ14764 893 aaKnown RBP14.21□□□□□ -0.13
CTCFL-212ENST00000539382 LARP1Q6PKG0 1096 aaKnown RBP14.21□□□□□ -0.13
CTCFL-212ENST00000539382 SKAP1Q86WV1 359 aa14.21□□□□□ -0.13
CTCFL-212ENST00000539382 FTSJ3Q8IY81 847 aaKnown RBP14.21□□□□□ -0.13
CTCFL-212ENST00000539382 TMEM57Q8N5G2 664 aa14.21□□□□□ -0.13
CTCFL-212ENST00000539382 STRN4Q9NRL3 753 aa14.21□□□□□ -0.13
CTCFL-212ENST00000539382 KDM2BQ8NHM5 1336 aa14.21□□□□□ -0.13
CTCFL-212ENST00000539382 TATP17735 454 aaPredicted RBP14.21□□□□□ -0.14
CTCFL-212ENST00000539382 TOM1L2Q6ZVM7 507 aa14.21□□□□□ -0.14
CTCFL-212ENST00000539382 ATF5Q9Y2D1 282 aaPredicted RBP14.2□□□□□ -0.14
CTCFL-212ENST00000539382 CYP27B1O15528 508 aa14.2□□□□□ -0.14
CTCFL-212ENST00000539382 PCDHB15Q9Y5E8 787 aa14.2□□□□□ -0.14
CTCFL-212ENST00000539382 IPO8O15397 1037 aaKnown RBP14.19□□□□□ -0.14
CTCFL-212ENST00000539382 IGHDP01880 384 aa14.19□□□□□ -0.14
CTCFL-212ENST00000539382 PHKG2P15735 406 aa14.19□□□□□ -0.14
CTCFL-212ENST00000539382 KDM6AO15550 1401 aaPredicted RBP14.19□□□□□ -0.14
CTCFL-212ENST00000539382 COL16A1Q07092 1604 aaPredicted RBP14.19□□□□□ -0.14
CTCFL-212ENST00000539382 BABAM1Q9NWV8 329 aa14.18□□□□□ -0.14
CTCFL-212ENST00000539382 BTG4Q9NY30 223 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms