RNA–Protein interactions for RNA: ENST00000539382.5

CTCFL-212, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,262 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-212ENST00000539382 NISCHQ9Y2I1 1504 aa25.17■■□□□ 1.62
CTCFL-212ENST00000539382 CCDC180Q9P1Z9 1646 aa21.83■■□□□ 1.08
CTCFL-212ENST00000539382 CHIC1Q5VXU3 224 aa21.36■■□□□ 1.01
CTCFL-212ENST00000539382 ZCCHC6Q5VYS8 1495 aaKnown RBP21.14■□□□□ 0.97
CTCFL-212ENST00000539382 DCAF8L2P0C7V8 631 aa20.88■□□□□ 0.93
CTCFL-212ENST00000539382 AEBP2Q6ZN18 517 aaPredicted RBP20.85■□□□□ 0.93
CTCFL-212ENST00000539382 ABCC9O60706 1549 aa20.79■□□□□ 0.92
CTCFL-212ENST00000539382 DCAF1Q9Y4B6 1507 aa20.73■□□□□ 0.91
CTCFL-212ENST00000539382 SHROOM4Q9ULL8 1493 aa20.68■□□□□ 0.9
CTCFL-212ENST00000539382 MYO15BQ96JP2 1530 aa20.46■□□□□ 0.87
CTCFL-212ENST00000539382 NACADO15069 1562 aa20.36■□□□□ 0.85
CTCFL-212ENST00000539382 SCRIBQ14160 1630 aa20.21■□□□□ 0.83
CTCFL-212ENST00000539382 RB1CC1Q8TDY2 1594 aa20.18■□□□□ 0.82
CTCFL-212ENST00000539382 SUPT5HO00267 1087 aaKnown RBP19.89■□□□□ 0.77
CTCFL-212ENST00000539382 UNC13AQ9UPW8 1703 aa19.85■□□□□ 0.77
CTCFL-212ENST00000539382 BICRAQ9NZM4 1560 aa19.67■□□□□ 0.74
CTCFL-212ENST00000539382 PABPN1Q86U42 306 aaKnown RBP eCLIP19.67■□□□□ 0.74
CTCFL-212ENST00000539382 CECR2Q9BXF3 1484 aa19.64■□□□□ 0.74
CTCFL-212ENST00000539382 RSF1Q96T23 1441 aaPredicted RBP19.58■□□□□ 0.73
CTCFL-212ENST00000539382 MROH2BQ7Z745 1585 aa19.5■□□□□ 0.71
CTCFL-212ENST00000539382 BAZ1AQ9NRL2 1556 aaPredicted RBP19.39■□□□□ 0.69
CTCFL-212ENST00000539382 WIZO95785 1651 aa19.33■□□□□ 0.69
CTCFL-212ENST00000539382 SMARCA4P51532 1647 aa19.33■□□□□ 0.68
CTCFL-212ENST00000539382 PHF23Q9BUL5 403 aaPredicted RBP19.13■□□□□ 0.65
CTCFL-212ENST00000539382 PEG3Q9GZU2 1588 aa19.06■□□□□ 0.64
CTCFL-212ENST00000539382 TOP2AP11388 1531 aaKnown RBP19.06■□□□□ 0.64
CTCFL-212ENST00000539382 EIF4G1Q04637 1599 aaKnown RBP19.04■□□□□ 0.64
CTCFL-212ENST00000539382 ATAD2BQ9ULI0 1458 aa19.03■□□□□ 0.64
CTCFL-212ENST00000539382 SMARCA2P51531 1590 aa18.95■□□□□ 0.62
CTCFL-212ENST00000539382 CCDC88BA6NC98 1476 aa18.94■□□□□ 0.62
CTCFL-212ENST00000539382 BAZ1BQ9UIG0 1483 aaKnown RBP18.9■□□□□ 0.62
CTCFL-212ENST00000539382 NCAPD3P42695 1498 aa18.84■□□□□ 0.61
CTCFL-212ENST00000539382 HMGXB3Q12766 1538 aa18.77■□□□□ 0.6
CTCFL-212ENST00000539382 CC2D2AQ9P2K1 1620 aa18.77■□□□□ 0.59
CTCFL-212ENST00000539382 TRIM41Q8WV44 630 aa18.63■□□□□ 0.57
CTCFL-212ENST00000539382 ABCC8Q09428 1581 aa18.57■□□□□ 0.56
CTCFL-212ENST00000539382 DNAJC5BQ9UF47 199 aa18.5■□□□□ 0.55
CTCFL-212ENST00000539382 CFTRP13569 1480 aa18.44■□□□□ 0.54
CTCFL-212ENST00000539382 WRNQ14191 1432 aaPredicted RBP eCLIP18.39■□□□□ 0.53
CTCFL-212ENST00000539382 LOC105371045A0A1W2PR82 267 aa18.38■□□□□ 0.53
CTCFL-212ENST00000539382 FAM9AQ8IZU1 332 aaPredicted RBP18.38■□□□□ 0.53
CTCFL-212ENST00000539382 CADPSQ9ULU8 1353 aa18.38■□□□□ 0.53
CTCFL-212ENST00000539382 SYNJ1O43426 1573 aa18.34■□□□□ 0.53
CTCFL-212ENST00000539382 NESP48681 1621 aa18.29■□□□□ 0.52
CTCFL-212ENST00000539382 PRDM2Q13029 1718 aa18.25■□□□□ 0.51
CTCFL-212ENST00000539382 SOGA1O94964 1423 aa18.25■□□□□ 0.51
CTCFL-212ENST00000539382 CUX1P39880 1505 aa18.22■□□□□ 0.51
CTCFL-212ENST00000539382 TOP2BQ02880 1626 aa18.21■□□□□ 0.51
CTCFL-212ENST00000539382 RUSC2Q8N2Y8 1516 aa18.21■□□□□ 0.51
CTCFL-212ENST00000539382 EHMT2Q96KQ7 1210 aa18.18■□□□□ 0.5
CTCFL-212ENST00000539382 FANCD2Q9BXW9 1451 aa18.18■□□□□ 0.5
CTCFL-212ENST00000539382 BIVM-ERCC5R4GMW8 1640 aa18.17■□□□□ 0.5
CTCFL-212ENST00000539382 LAMC3Q9Y6N6 1575 aa18.15■□□□□ 0.5
CTCFL-212ENST00000539382 CSRNP3Q8WYN3 585 aa18.06■□□□□ 0.48
CTCFL-212ENST00000539382 EEA1Q15075 1411 aa18.05■□□□□ 0.48
CTCFL-212ENST00000539382 CEP164Q9UPV0 1460 aa18.03■□□□□ 0.48
CTCFL-212ENST00000539382 PDS5BQ9NTI5 1447 aa18.02■□□□□ 0.48
CTCFL-212ENST00000539382 FGD5Q6ZNL6 1462 aa17.99■□□□□ 0.47
CTCFL-212ENST00000539382 KIF21AQ7Z4S6 1674 aa17.99■□□□□ 0.47
CTCFL-212ENST00000539382 TOPBP1Q92547 1522 aa17.98■□□□□ 0.47
CTCFL-212ENST00000539382 URB2Q14146 1524 aaKnown RBP17.98■□□□□ 0.47
CTCFL-212ENST00000539382 DNMBPQ6XZF7 1577 aa17.98■□□□□ 0.47
CTCFL-212ENST00000539382 POLA1P09884 1462 aaPredicted RBP17.91■□□□□ 0.46
CTCFL-212ENST00000539382 RAD54L2Q9Y4B4 1467 aa17.9■□□□□ 0.46
CTCFL-212ENST00000539382 KIF27Q86VH2 1401 aa17.89■□□□□ 0.45
CTCFL-212ENST00000539382 CUX2O14529 1486 aa17.88■□□□□ 0.45
CTCFL-212ENST00000539382 GOLGA3Q08378 1498 aa17.86■□□□□ 0.45
CTCFL-212ENST00000539382 KIF21BO75037 1637 aa17.85■□□□□ 0.45
CTCFL-212ENST00000539382 RAPGEF2Q9Y4G8 1499 aa17.85■□□□□ 0.45
CTCFL-212ENST00000539382 UBTFP17480 764 aaKnown RBP17.84■□□□□ 0.45
CTCFL-212ENST00000539382 TNIKQ9UKE5 1360 aa17.83■□□□□ 0.44
CTCFL-212ENST00000539382 PRXQ9BXM0 1461 aa17.82■□□□□ 0.44
CTCFL-212ENST00000539382 ABCA10Q8WWZ4 1543 aa17.81■□□□□ 0.44
CTCFL-212ENST00000539382 PLPPR3Q6T4P5 718 aa17.81■□□□□ 0.44
CTCFL-212ENST00000539382 IGF1RP08069 1367 aa17.8■□□□□ 0.44
CTCFL-212ENST00000539382 MRC2Q9UBG0 1479 aa17.8■□□□□ 0.44
CTCFL-212ENST00000539382 CEP162Q5TB80 1403 aa17.76■□□□□ 0.43
CTCFL-212ENST00000539382 ERCC6Q03468 1493 aa17.75■□□□□ 0.43
CTCFL-212ENST00000539382 WDR97A6NE52 1622 aa17.73■□□□□ 0.43
CTCFL-212ENST00000539382 TDRD9Q8NDG6 1382 aaKnown RBP17.73■□□□□ 0.43
CTCFL-212ENST00000539382 ERICH3Q5RHP9 1530 aa17.72■□□□□ 0.43
CTCFL-212ENST00000539382 WDR62O43379 1518 aa17.72■□□□□ 0.43
CTCFL-212ENST00000539382 TARBP1Q13395 1621 aaKnown RBP17.71■□□□□ 0.43
CTCFL-212ENST00000539382 CARMIL1Q5VZK9 1371 aa17.68■□□□□ 0.42
CTCFL-212ENST00000539382 THOC2Q8NI27 1593 aaKnown RBP17.67■□□□□ 0.42
CTCFL-212ENST00000539382 ABCA5Q8WWZ7 1642 aa17.66■□□□□ 0.42
CTCFL-212ENST00000539382 GAPVD1Q14C86 1478 aa17.64■□□□□ 0.41
CTCFL-212ENST00000539382 RANGAP1P46060 587 aaPredicted RBP17.63■□□□□ 0.41
CTCFL-212ENST00000539382 CLIP1P30622 1438 aa17.61■□□□□ 0.41
CTCFL-212ENST00000539382 AQRO60306 1485 aaKnown RBP eCLIP17.6■□□□□ 0.413e-6■■■□□ 17.6
CTCFL-212ENST00000539382 ZNF608Q9ULD9 1512 aaPredicted RBP17.59■□□□□ 0.41
CTCFL-212ENST00000539382 IFT140Q96RY7 1462 aa17.58■□□□□ 0.4
CTCFL-212ENST00000539382 CUL7Q14999 1698 aa17.54■□□□□ 0.4
CTCFL-212ENST00000539382 PPARGC1BQ86YN6 1023 aaKnown RBP17.54■□□□□ 0.4
CTCFL-212ENST00000539382 PCGF6Q9BYE7 350 aa17.51■□□□□ 0.39
CTCFL-212ENST00000539382 PBRM1Q86U86 1689 aa17.5■□□□□ 0.39
CTCFL-212ENST00000539382 GRIN2BQ13224 1484 aa17.47■□□□□ 0.39
CTCFL-212ENST00000539382 ARAP1Q96P48 1450 aa17.46■□□□□ 0.39
CTCFL-212ENST00000539382 EIF4G3O43432 1585 aaKnown RBP17.46■□□□□ 0.39
CTCFL-212ENST00000539382 ARHGAP35Q9NRY4 1499 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms