RNA–Protein interactions for RNA: ENST00000539303.5

SNHG1-210, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 240 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-210ENST00000539303 TRIM50Q86XT4 487 aa5.59□□□□□ -1.51
SNHG1-210ENST00000539303 CCDC9Q9Y3X0 531 aaKnown RBP5.59□□□□□ -1.51
SNHG1-210ENST00000539303 SSFA2P28290 1259 aa5.58□□□□□ -1.52
SNHG1-210ENST00000539303 GRM5P41594 1212 aa5.58□□□□□ -1.52
SNHG1-210ENST00000539303 RPIAP49247 311 aa5.58□□□□□ -1.52
SNHG1-210ENST00000539303 ATP1A2P50993 1020 aa5.58□□□□□ -1.52
SNHG1-210ENST00000539303 PSME1Q06323 249 aa5.58□□□□□ -1.52
SNHG1-210ENST00000539303 RNF20Q5VTR2 975 aa5.58□□□□□ -1.52
SNHG1-210ENST00000539303 SEPT12Q8IYM1 358 aa5.58□□□□□ -1.52
SNHG1-210ENST00000539303 LARGE2Q8N3Y3 721 aa5.58□□□□□ -1.52
SNHG1-210ENST00000539303 CLP1Q92989 425 aaKnown RBP5.58□□□□□ -1.52
SNHG1-210ENST00000539303 PRIMPOLQ96LW4 560 aa5.58□□□□□ -1.52
SNHG1-210ENST00000539303 CYLDQ9NQC7 956 aa5.58□□□□□ -1.52
SNHG1-210ENST00000539303 CDV3Q9UKY7 258 aaKnown RBP5.58□□□□□ -1.52
SNHG1-210ENST00000539303 MAP4K5Q9Y4K4 846 aa5.58□□□□□ -1.52
SNHG1-210ENST00000539303 SIAH2O43255 324 aa5.57□□□□□ -1.52
SNHG1-210ENST00000539303 NR3C2P08235 984 aa5.57□□□□□ -1.52
SNHG1-210ENST00000539303 ATP2B4P23634 1241 aa5.57□□□□□ -1.52
SNHG1-210ENST00000539303 MFAP1P55081 439 aaKnown RBP5.57□□□□□ -1.52
SNHG1-210ENST00000539303 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.57□□□□□ -1.52
SNHG1-210ENST00000539303 ZNF784Q8NCA9 323 aaPredicted RBP5.57□□□□□ -1.52
SNHG1-210ENST00000539303 OSBPL3Q9H4L5 887 aa5.57□□□□□ -1.52
SNHG1-210ENST00000539303 SERPINB4P48594 390 aa5.56□□□□□ -1.52
SNHG1-210ENST00000539303 SEC13P55735 322 aa5.56□□□□□ -1.52
SNHG1-210ENST00000539303 USP4Q13107 963 aa5.56□□□□□ -1.52
SNHG1-210ENST00000539303 TXNDC2Q86VQ3 553 aa5.56□□□□□ -1.52
SNHG1-210ENST00000539303 TSEN2Q8NCE0 465 aaKnown RBP5.56□□□□□ -1.52
SNHG1-210ENST00000539303 MRGPRX2Q96LB1 330 aa5.56□□□□□ -1.52
SNHG1-210ENST00000539303 CDK15Q96Q40 435 aa5.56□□□□□ -1.52
SNHG1-210ENST00000539303 PURBQ96QR8 312 aaKnown RBP5.56□□□□□ -1.52
SNHG1-210ENST00000539303 MTMR7Q9Y216 660 aa5.56□□□□□ -1.52
SNHG1-210ENST00000539303 TMEM229AB2RXF0 380 aa5.55□□□□□ -1.52
SNHG1-210ENST00000539303 CD2BP2O95400 341 aaKnown RBP5.55□□□□□ -1.52
SNHG1-210ENST00000539303 SLC19A1P41440 591 aa5.55□□□□□ -1.52
SNHG1-210ENST00000539303 SCNN1DP51172 638 aa5.55□□□□□ -1.52
SNHG1-210ENST00000539303 ERVK-9P63128 1117 aa5.55□□□□□ -1.52
SNHG1-210ENST00000539303 OCLNQ16625 522 aa5.55□□□□□ -1.52
SNHG1-210ENST00000539303 SWI5Q1ZZU3 235 aa5.55□□□□□ -1.52
SNHG1-210ENST00000539303 FOXD4L5Q5VV16 416 aaPredicted RBP5.55□□□□□ -1.52
SNHG1-210ENST00000539303 CAPN12Q6ZSI9 719 aa5.55□□□□□ -1.52
SNHG1-210ENST00000539303 RGS22Q8NE09 1264 aa5.55□□□□□ -1.52
SNHG1-210ENST00000539303 FOXD4L4Q8WXT5 416 aaPredicted RBP5.55□□□□□ -1.52
SNHG1-210ENST00000539303 ZNF358Q9NW07 568 aa5.55□□□□□ -1.52
SNHG1-210ENST00000539303 LILRA1O75019 489 aa5.54□□□□□ -1.52
SNHG1-210ENST00000539303 ADH1CP00326 375 aa5.54□□□□□ -1.52
SNHG1-210ENST00000539303 MYCP01106 439 aaPredicted RBP5.54□□□□□ -1.52
SNHG1-210ENST00000539303 ADD1P35611 737 aaKnown RBP5.54□□□□□ -1.52
SNHG1-210ENST00000539303 PPP1R26Q5T8A7 1209 aaPredicted RBP5.54□□□□□ -1.52
SNHG1-210ENST00000539303 CC2D2BQ6DHV5 1058 aa5.54□□□□□ -1.52
SNHG1-210ENST00000539303 HINFPQ9BQA5 517 aa5.54□□□□□ -1.52
SNHG1-210ENST00000539303 MKNK1Q9BUB5 465 aa5.54□□□□□ -1.52
SNHG1-210ENST00000539303 GNEQ9Y223 722 aaKnown RBP5.54□□□□□ -1.52
SNHG1-210ENST00000539303 WNT7AO00755 349 aa5.53□□□□□ -1.52
SNHG1-210ENST00000539303 FOXC1Q12948 553 aa5.53□□□□□ -1.52
SNHG1-210ENST00000539303 SPRYD7Q5W111 196 aa5.53□□□□□ -1.52
SNHG1-210ENST00000539303 SND1Q7KZF4 910 aaKnown RBP eCLIP5.53□□□□□ -1.52
SNHG1-210ENST00000539303 CCDC116Q8IYX3 515 aa5.53□□□□□ -1.52
SNHG1-210ENST00000539303 SIRT1Q96EB6 747 aa5.53□□□□□ -1.52
SNHG1-210ENST00000539303 ETNK1Q9HBU6 452 aa5.53□□□□□ -1.52
SNHG1-210ENST00000539303 RAB6BQ9NRW1 208 aa5.53□□□□□ -1.52
SNHG1-210ENST00000539303 CXXC1Q9P0U4 656 aaPredicted RBP5.53□□□□□ -1.52
SNHG1-210ENST00000539303 SERTAD1Q9UHV2 236 aa5.53□□□□□ -1.52
SNHG1-210ENST00000539303 PATL2C9JE40 543 aaKnown RBP5.52□□□□□ -1.53
SNHG1-210ENST00000539303 GDF10P55107 478 aa5.52□□□□□ -1.53
SNHG1-210ENST00000539303 FKBP5Q13451 457 aaPredicted RBP5.52□□□□□ -1.53
SNHG1-210ENST00000539303 TBCELQ5QJ74 424 aa5.52□□□□□ -1.53
SNHG1-210ENST00000539303 ZNF697Q5TEC3 545 aa5.52□□□□□ -1.53
SNHG1-210ENST00000539303 B4GALNT3Q6L9W6 998 aa5.52□□□□□ -1.53
SNHG1-210ENST00000539303 NPM2Q86SE8 214 aaKnown RBP5.52□□□□□ -1.53
SNHG1-210ENST00000539303 TNS4Q8IZW8 715 aa5.52□□□□□ -1.53
SNHG1-210ENST00000539303 ZNF428Q96B54 188 aa5.52□□□□□ -1.53
SNHG1-210ENST00000539303 ANO2Q9NQ90 1003 aa5.52□□□□□ -1.53
SNHG1-210ENST00000539303 PKD2L1Q9P0L9 805 aa5.52□□□□□ -1.53
SNHG1-210ENST00000539303 SEPT3Q9UH03 358 aa5.52□□□□□ -1.53
SNHG1-210ENST00000539303 RBM19Q9Y4C8 960 aaKnown RBP5.52□□□□□ -1.53
SNHG1-210ENST00000539303 ALDH1A1P00352 501 aa5.51□□□□□ -1.53
SNHG1-210ENST00000539303 CBLBQ13191 982 aa5.51□□□□□ -1.53
SNHG1-210ENST00000539303 ZNF211Q13398 564 aaPredicted RBP5.51□□□□□ -1.53
SNHG1-210ENST00000539303 PLA2G2EQ9NZK7 142 aa5.51□□□□□ -1.53
SNHG1-210ENST00000539303 A0A0G2JS52 829 aa5.5□□□□□ -1.53
SNHG1-210ENST00000539303 ARID4AP29374 1257 aaPredicted RBP5.5□□□□□ -1.53
SNHG1-210ENST00000539303 WEE1P30291 646 aa5.5□□□□□ -1.53
SNHG1-210ENST00000539303 EPHA4P54764 986 aa5.5□□□□□ -1.53
SNHG1-210ENST00000539303 MYT1Q01538 1121 aa5.5□□□□□ -1.53
SNHG1-210ENST00000539303 NR5A1Q13285 461 aa5.5□□□□□ -1.53
SNHG1-210ENST00000539303 NNTQ13423 1086 aa5.5□□□□□ -1.53
SNHG1-210ENST00000539303 MTMR3Q13615 1198 aa5.5□□□□□ -1.53
SNHG1-210ENST00000539303 MPNDQ8N594 471 aa5.5□□□□□ -1.53
SNHG1-210ENST00000539303 KDF1Q8NAX2 398 aaPredicted RBP5.5□□□□□ -1.53
SNHG1-210ENST00000539303 CCER1Q8TC90 406 aaPredicted RBP5.5□□□□□ -1.53
SNHG1-210ENST00000539303 TSPAN10Q9H1Z9 355 aaPredicted RBP5.5□□□□□ -1.53
SNHG1-210ENST00000539303 ARHGEF10LQ9HCE6 1279 aa5.5□□□□□ -1.53
SNHG1-210ENST00000539303 USP3Q9Y6I4 520 aa5.5□□□□□ -1.53
SNHG1-210ENST00000539303 SOWAHDA6NJG2 315 aa5.49□□□□□ -1.53
SNHG1-210ENST00000539303 J3QL48 77 aa5.49□□□□□ -1.53
SNHG1-210ENST00000539303 TNFRSF10AO00220 468 aa5.49□□□□□ -1.53
SNHG1-210ENST00000539303 C21orf2O43822 256 aa5.49□□□□□ -1.53
SNHG1-210ENST00000539303 ABL1P00519 1130 aa5.49□□□□□ -1.53
SNHG1-210ENST00000539303 INHAP05111 366 aa5.49□□□□□ -1.53
SNHG1-210ENST00000539303 DHX9Q08211 1270 aaKnown RBP5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms