RNA–Protein interactions for RNA: ENST00000538036.1

VPS37C-204, Transcript of VPS37C, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS37C, Length 506 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37C-204ENST00000538036 CGNL1Q0VF96 1302 aa14.44□□□□□ -0.1
VPS37C-204ENST00000538036 HOXC9P31274 260 aa14.44□□□□□ -0.1
VPS37C-204ENST00000538036 AMPHP49418 695 aa14.44□□□□□ -0.1
VPS37C-204ENST00000538036 PELP1Q8IZL8 1130 aaKnown RBP14.44□□□□□ -0.1
VPS37C-204ENST00000538036 CCNL1Q9UK58 526 aaPredicted RBP14.44□□□□□ -0.1
VPS37C-204ENST00000538036 QSER1Q2KHR3 1735 aa14.44□□□□□ -0.1
VPS37C-204ENST00000538036 MAP3K19Q56UN5 1328 aa14.43□□□□□ -0.1
VPS37C-204ENST00000538036 FAM208AQ9UK61 1670 aaKnown RBP14.42□□□□□ -0.1
VPS37C-204ENST00000538036 COL24A1Q17RW2 1714 aa14.42□□□□□ -0.1
VPS37C-204ENST00000538036 KCNQ4P56696 695 aa14.42□□□□□ -0.1
VPS37C-204ENST00000538036 USP47Q96K76 1375 aa14.42□□□□□ -0.1
VPS37C-204ENST00000538036 FLAD1Q8NFF5 587 aa14.41□□□□□ -0.1
VPS37C-204ENST00000538036 NLGN2Q8NFZ4 835 aa14.41□□□□□ -0.1
VPS37C-204ENST00000538036 NSD2O96028 1365 aa14.41□□□□□ -0.1
VPS37C-204ENST00000538036 RTL1A6NKG5 1358 aa14.4□□□□□ -0.1
VPS37C-204ENST00000538036 MSH5O43196 834 aa14.4□□□□□ -0.1
VPS37C-204ENST00000538036 COL23A1Q86Y22 540 aaPredicted RBP14.4□□□□□ -0.1
VPS37C-204ENST00000538036 RAPGEF4Q8WZA2 1011 aa14.39□□□□□ -0.11
VPS37C-204ENST00000538036 TESK2Q96S53 571 aa14.39□□□□□ -0.11
VPS37C-204ENST00000538036 CD2APQ9Y5K6 639 aa14.39□□□□□ -0.11
VPS37C-204ENST00000538036 YBX3P16989 372 aaKnown RBP eCLIP14.38□□□□□ -0.11
VPS37C-204ENST00000538036 NBPF6Q5VWK0 638 aa14.38□□□□□ -0.11
VPS37C-204ENST00000538036 NBPF4Q96M43 638 aa14.38□□□□□ -0.11
VPS37C-204ENST00000538036 LY75O60449 1722 aa14.37□□□□□ -0.11
VPS37C-204ENST00000538036 MEGF6O75095 1541 aa14.36□□□□□ -0.11
VPS37C-204ENST00000538036 TONSLQ96HA7 1378 aa14.36□□□□□ -0.11
VPS37C-204ENST00000538036 SMG6Q86US8 1419 aaKnown RBP14.36□□□□□ -0.11
VPS37C-204ENST00000538036 ST20-MTHFSA0A0A6YYL1 179 aa14.36□□□□□ -0.11
VPS37C-204ENST00000538036 TATP17735 454 aaPredicted RBP14.36□□□□□ -0.11
VPS37C-204ENST00000538036 FBLN1P23142 703 aa14.36□□□□□ -0.11
VPS37C-204ENST00000538036 FYB1O15117 783 aa14.35□□□□□ -0.11
VPS37C-204ENST00000538036 PCDH11XQ9BZA7 1347 aa14.35□□□□□ -0.11
VPS37C-204ENST00000538036 PCDH11YQ9BZA8 1340 aa14.35□□□□□ -0.11
VPS37C-204ENST00000538036 KIF24Q5T7B8 1368 aa14.34□□□□□ -0.11
VPS37C-204ENST00000538036 GOLGB1Q14789 3259 aaKnown RBP14.34□□□□□ -0.11
VPS37C-204ENST00000538036 RRS1Q15050 365 aaKnown RBP14.34□□□□□ -0.11
VPS37C-204ENST00000538036 IFFO2Q5TF58 517 aa14.34□□□□□ -0.11
VPS37C-204ENST00000538036 SMARCC1Q92922 1105 aaPredicted RBP14.34□□□□□ -0.11
VPS37C-204ENST00000538036 DOT1LQ8TEK3 1739 aa14.34□□□□□ -0.11
VPS37C-204ENST00000538036 MSL1Q68DK7 614 aa14.33□□□□□ -0.12
VPS37C-204ENST00000538036 INSRP06213 1382 aa14.33□□□□□ -0.12
VPS37C-204ENST00000538036 PALLDQ8WX93 1383 aa14.33□□□□□ -0.12
VPS37C-204ENST00000538036 SHANK3Q9BYB0 1731 aa14.32□□□□□ -0.12
VPS37C-204ENST00000538036 TUBGCP6Q96RT7 1819 aa14.32□□□□□ -0.12
VPS37C-204ENST00000538036 MPRIPQ6WCQ1 1025 aa14.32□□□□□ -0.12
VPS37C-204ENST00000538036 GPBP1L1Q9HC44 474 aaPredicted RBP14.32□□□□□ -0.12
VPS37C-204ENST00000538036 TMF1P82094 1093 aa14.31□□□□□ -0.12
VPS37C-204ENST00000538036 USHBP1Q8N6Y0 703 aa14.31□□□□□ -0.12
VPS37C-204ENST00000538036 GGNBP2Q9H3C7 697 aa14.31□□□□□ -0.12
VPS37C-204ENST00000538036 NSD3Q9BZ95 1437 aa14.31□□□□□ -0.12
VPS37C-204ENST00000538036 ATP10DQ9P241 1426 aa14.31□□□□□ -0.12
VPS37C-204ENST00000538036 CDCA8Q53HL2 280 aa14.3□□□□□ -0.12
VPS37C-204ENST00000538036 HSP90AB2PQ58FF8 381 aa14.3□□□□□ -0.12
VPS37C-204ENST00000538036 AK7Q96M32 723 aa14.3□□□□□ -0.12
VPS37C-204ENST00000538036 FLT4P35916 1363 aa14.3□□□□□ -0.12
VPS37C-204ENST00000538036 CEP350Q5VT06 3117 aa14.3□□□□□ -0.12
VPS37C-204ENST00000538036 CYP27B1O15528 508 aa14.29□□□□□ -0.12
VPS37C-204ENST00000538036 NKX1-1Q15270 411 aaPredicted RBP14.29□□□□□ -0.12
VPS37C-204ENST00000538036 ADCY9O60503 1353 aa14.27□□□□□ -0.12
VPS37C-204ENST00000538036 SSFA2P28290 1259 aa14.27□□□□□ -0.13
VPS37C-204ENST00000538036 PIGBQ92521 554 aa14.27□□□□□ -0.13
VPS37C-204ENST00000538036 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.27□□□□□ -0.13
VPS37C-204ENST00000538036 SPG7Q9UQ90 795 aa14.27□□□□□ -0.13
VPS37C-204ENST00000538036 RGPD2P0DJD1 1756 aa14.27□□□□□ -0.13
VPS37C-204ENST00000538036 C5P01031 1676 aa14.26□□□□□ -0.13
VPS37C-204ENST00000538036 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.26□□□□□ -0.13
VPS37C-204ENST00000538036 HSPA6P17066 643 aa14.26□□□□□ -0.13
VPS37C-204ENST00000538036 IGSF1Q8N6C5 1336 aa14.25□□□□□ -0.13
VPS37C-204ENST00000538036 LOC102724428A0A0B4J2F2 783 aa14.25□□□□□ -0.13
VPS37C-204ENST00000538036 SIK1P57059 783 aa14.25□□□□□ -0.13
VPS37C-204ENST00000538036 PHF14O94880 888 aa14.23□□□□□ -0.13
VPS37C-204ENST00000538036 AMIGO3Q86WK7 504 aa14.23□□□□□ -0.13
VPS37C-204ENST00000538036 TMOD3Q9NYL9 352 aa14.23□□□□□ -0.13
VPS37C-204ENST00000538036 C4BP0C0L5 1744 aa14.23□□□□□ -0.13
VPS37C-204ENST00000538036 NCAPD2Q15021 1401 aa14.23□□□□□ -0.13
VPS37C-204ENST00000538036 WASHC2AQ641Q2 1341 aa14.22□□□□□ -0.13
VPS37C-204ENST00000538036 ZNF526Q8TF50 670 aaPredicted RBP14.22□□□□□ -0.13
VPS37C-204ENST00000538036 TAF1LQ8IZX4 1826 aa14.22□□□□□ -0.13
VPS37C-204ENST00000538036 IFNL2Q8IZJ0 200 aa14.21□□□□□ -0.13
VPS37C-204ENST00000538036 LINC00116Q8NCU8 138 aa14.21□□□□□ -0.13
VPS37C-204ENST00000538036 CARD14Q9BXL6 1004 aa14.21□□□□□ -0.13
VPS37C-204ENST00000538036 EMILIN1Q9Y6C2 1016 aa14.21□□□□□ -0.13
VPS37C-204ENST00000538036 GNPATO15228 680 aa14.2□□□□□ -0.14
VPS37C-204ENST00000538036 ATP6V1AP38606 617 aa14.2□□□□□ -0.14
VPS37C-204ENST00000538036 TGFB2P61812 414 aa14.2□□□□□ -0.14
VPS37C-204ENST00000538036 NLGN1Q8N2Q7 840 aa14.2□□□□□ -0.14
VPS37C-204ENST00000538036 PLEKHG2Q9H7P9 1386 aa14.2□□□□□ -0.14
VPS37C-204ENST00000538036 KIF3CO14782 793 aa14.19□□□□□ -0.14
VPS37C-204ENST00000538036 PPM1GO15355 546 aaPredicted RBP14.19□□□□□ -0.14
VPS37C-204ENST00000538036 EYA1Q99502 592 aa14.19□□□□□ -0.14
VPS37C-204ENST00000538036 ASAP1Q9ULH1 1129 aa14.19□□□□□ -0.14
VPS37C-204ENST00000538036 MMP10P09238 476 aa14.18□□□□□ -0.14
VPS37C-204ENST00000538036 PHKG2P15735 406 aa14.18□□□□□ -0.14
VPS37C-204ENST00000538036 ITPK1Q13572 414 aa14.18□□□□□ -0.14
VPS37C-204ENST00000538036 TRAPPC3LQ5T215 181 aa14.18□□□□□ -0.14
VPS37C-204ENST00000538036 SMIM5Q71RC9 77 aa14.18□□□□□ -0.14
VPS37C-204ENST00000538036 PKD1L3Q7Z443 1732 aa14.18□□□□□ -0.14
VPS37C-204ENST00000538036 UBR3Q6ZT12 1888 aa14.17□□□□□ -0.14
VPS37C-204ENST00000538036 ADRA2BP18089 450 aa14.17□□□□□ -0.14
VPS37C-204ENST00000538036 APLP1P51693 650 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms