RNA–Protein interactions for RNA: ENST00000535451.5

LDHA-213, Transcript of lactate dehydrogenase A, humanhuman

TSL 4

Gene LDHA, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-213ENST00000535451 COG3Q96JB2 828 aa17.29■□□□□ 0.36
LDHA-213ENST00000535451 ANKRD36BQ8N2N9 1353 aa17.28■□□□□ 0.36
LDHA-213ENST00000535451 MAP3K19Q56UN5 1328 aa17.28■□□□□ 0.36
LDHA-213ENST00000535451 GIGYF1O75420 1035 aaPredicted RBP17.28■□□□□ 0.36
LDHA-213ENST00000535451 HOXC9P31274 260 aa17.28■□□□□ 0.36
LDHA-213ENST00000535451 CCNL1Q9UK58 526 aaPredicted RBP17.28■□□□□ 0.36
LDHA-213ENST00000535451 MSL1Q68DK7 614 aa17.25■□□□□ 0.35
LDHA-213ENST00000535451 PUS7Q96PZ0 661 aaKnown RBP17.25■□□□□ 0.35
LDHA-213ENST00000535451 NSD2O96028 1365 aa17.25■□□□□ 0.35
LDHA-213ENST00000535451 COL23A1Q86Y22 540 aaPredicted RBP17.24■□□□□ 0.35
LDHA-213ENST00000535451 USHBP1Q8N6Y0 703 aa17.24■□□□□ 0.35
LDHA-213ENST00000535451 YBX3P16989 372 aaKnown RBP eCLIP17.23■□□□□ 0.352e-29■□□□□ 9.7
LDHA-213ENST00000535451 QSER1Q2KHR3 1735 aa17.23■□□□□ 0.35
LDHA-213ENST00000535451 DOT1LQ8TEK3 1739 aa17.23■□□□□ 0.35
LDHA-213ENST00000535451 USP47Q96K76 1375 aa17.23■□□□□ 0.35
LDHA-213ENST00000535451 FAM208AQ9UK61 1670 aaKnown RBP17.23■□□□□ 0.35
LDHA-213ENST00000535451 MEGF6O75095 1541 aa17.22■□□□□ 0.35
LDHA-213ENST00000535451 TUBGCP6Q96RT7 1819 aa17.22■□□□□ 0.35
LDHA-213ENST00000535451 ST20-MTHFSA0A0A6YYL1 179 aa17.22■□□□□ 0.35
LDHA-213ENST00000535451 GRIN3BO60391 1043 aa17.22■□□□□ 0.35
LDHA-213ENST00000535451 RRS1Q15050 365 aaKnown RBP17.22■□□□□ 0.35
LDHA-213ENST00000535451 NBPF6Q5VWK0 638 aa17.22■□□□□ 0.35
LDHA-213ENST00000535451 NBPF4Q96M43 638 aa17.22■□□□□ 0.35
LDHA-213ENST00000535451 TONSLQ96HA7 1378 aa17.22■□□□□ 0.35
LDHA-213ENST00000535451 RAPGEF4Q8WZA2 1011 aa17.21■□□□□ 0.35
LDHA-213ENST00000535451 TESK2Q96S53 571 aa17.21■□□□□ 0.35
LDHA-213ENST00000535451 CEP350Q5VT06 3117 aa17.21■□□□□ 0.34
LDHA-213ENST00000535451 COL24A1Q17RW2 1714 aa17.19■□□□□ 0.34
LDHA-213ENST00000535451 GGNBP2Q9H3C7 697 aa17.19■□□□□ 0.34
LDHA-213ENST00000535451 RGPD2P0DJD1 1756 aa17.19■□□□□ 0.34
LDHA-213ENST00000535451 LY75O60449 1722 aa17.18■□□□□ 0.34
LDHA-213ENST00000535451 TATP17735 454 aaPredicted RBP17.18■□□□□ 0.34
LDHA-213ENST00000535451 MPRIPQ6WCQ1 1025 aa17.17■□□□□ 0.34
LDHA-213ENST00000535451 CGNL1Q0VF96 1302 aa17.17■□□□□ 0.34
LDHA-213ENST00000535451 RTL1A6NKG5 1358 aa17.16■□□□□ 0.34
LDHA-213ENST00000535451 SHANK3Q9BYB0 1731 aa17.16■□□□□ 0.34
LDHA-213ENST00000535451 SMG6Q86US8 1419 aaKnown RBP17.16■□□□□ 0.34
LDHA-213ENST00000535451 FYB1O15117 783 aa17.16■□□□□ 0.34
LDHA-213ENST00000535451 HSP90AB2PQ58FF8 381 aa17.15■□□□□ 0.34
LDHA-213ENST00000535451 PALLDQ8WX93 1383 aa17.15■□□□□ 0.34
LDHA-213ENST00000535451 SLC24A1O60721 1099 aa17.14■□□□□ 0.33
LDHA-213ENST00000535451 FLAD1Q8NFF5 587 aa17.14■□□□□ 0.33
LDHA-213ENST00000535451 CD2APQ9Y5K6 639 aa17.14■□□□□ 0.33
LDHA-213ENST00000535451 PCDH11XQ9BZA7 1347 aa17.14■□□□□ 0.33
LDHA-213ENST00000535451 PCDH11YQ9BZA8 1340 aa17.14■□□□□ 0.33
LDHA-213ENST00000535451 ATP10DQ9P241 1426 aa17.13■□□□□ 0.33
LDHA-213ENST00000535451 ZNF526Q8TF50 670 aaPredicted RBP17.13■□□□□ 0.33
LDHA-213ENST00000535451 WWC3Q9ULE0 1092 aa17.13■□□□□ 0.33
LDHA-213ENST00000535451 PHF14O94880 888 aa17.12■□□□□ 0.33
LDHA-213ENST00000535451 SMIM5Q71RC9 77 aa17.12■□□□□ 0.33
LDHA-213ENST00000535451 AK7Q96M32 723 aa17.12■□□□□ 0.33
LDHA-213ENST00000535451 CYP27B1O15528 508 aa17.11■□□□□ 0.33
LDHA-213ENST00000535451 HMGB2P26583 209 aaKnown RBP17.11■□□□□ 0.33
LDHA-213ENST00000535451 GPBP1L1Q9HC44 474 aaPredicted RBP17.11■□□□□ 0.33
LDHA-213ENST00000535451 INSRP06213 1382 aa17.11■□□□□ 0.33
LDHA-213ENST00000535451 TMF1P82094 1093 aa17.1■□□□□ 0.33
LDHA-213ENST00000535451 AMIGO3Q86WK7 504 aa17.1■□□□□ 0.33
LDHA-213ENST00000535451 C5P01031 1676 aa17.1■□□□□ 0.33
LDHA-213ENST00000535451 IFFO2Q5TF58 517 aa17.09■□□□□ 0.33
LDHA-213ENST00000535451 SMARCC1Q92922 1105 aaPredicted RBP17.09■□□□□ 0.33
LDHA-213ENST00000535451 FLT4P35916 1363 aa17.08■□□□□ 0.32
LDHA-213ENST00000535451 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.08■□□□□ 0.32
LDHA-213ENST00000535451 PPM1GO15355 546 aaPredicted RBP17.08■□□□□ 0.32
LDHA-213ENST00000535451 PIGBQ92521 554 aa17.08■□□□□ 0.32
LDHA-213ENST00000535451 IGSF1Q8N6C5 1336 aa17.06■□□□□ 0.32
LDHA-213ENST00000535451 EMILIN1Q9Y6C2 1016 aa17.06■□□□□ 0.32
LDHA-213ENST00000535451 C4BP0C0L5 1744 aa17.05■□□□□ 0.32
LDHA-213ENST00000535451 SPG7Q9UQ90 795 aa17.04■□□□□ 0.32
LDHA-213ENST00000535451 TAF1LQ8IZX4 1826 aa17.04■□□□□ 0.32
LDHA-213ENST00000535451 LOC102724428A0A0B4J2F2 783 aa17.03■□□□□ 0.32
LDHA-213ENST00000535451 SIK1P57059 783 aa17.03■□□□□ 0.32
LDHA-213ENST00000535451 LINC00116Q8NCU8 138 aa17.03■□□□□ 0.32
LDHA-213ENST00000535451 CARD14Q9BXL6 1004 aa17.03■□□□□ 0.32
LDHA-213ENST00000535451 TMOD3Q9NYL9 352 aa17.03■□□□□ 0.32
LDHA-213ENST00000535451 ADCY9O60503 1353 aa17.02■□□□□ 0.32
LDHA-213ENST00000535451 KIF24Q5T7B8 1368 aa17.02■□□□□ 0.32
LDHA-213ENST00000535451 GNPATO15228 680 aa17.02■□□□□ 0.32
LDHA-213ENST00000535451 HSPA6P17066 643 aa17.02■□□□□ 0.32
LDHA-213ENST00000535451 SSFA2P28290 1259 aa17.02■□□□□ 0.32
LDHA-213ENST00000535451 CDCA8Q53HL2 280 aa17.02■□□□□ 0.32
LDHA-213ENST00000535451 NSD3Q9BZ95 1437 aa17.02■□□□□ 0.31
LDHA-213ENST00000535451 TOGARAM1Q9Y4F4 1720 aa17.01■□□□□ 0.31
LDHA-213ENST00000535451 NKX1-1Q15270 411 aaPredicted RBP17.01■□□□□ 0.31
LDHA-213ENST00000535451 ASAP1Q9ULH1 1129 aa17.01■□□□□ 0.31
LDHA-213ENST00000535451 ITGB4P16144 1822 aa17■□□□□ 0.31
LDHA-213ENST00000535451 KIF20BQ96Q89 1820 aa17■□□□□ 0.31
LDHA-213ENST00000535451 ATP6V1AP38606 617 aa17■□□□□ 0.31
LDHA-213ENST00000535451 ITPK1Q13572 414 aa17■□□□□ 0.31
LDHA-213ENST00000535451 EYA1Q99502 592 aa16.99■□□□□ 0.31
LDHA-213ENST00000535451 MMP10P09238 476 aa16.98■□□□□ 0.31
LDHA-213ENST00000535451 UBR3Q6ZT12 1888 aa16.98■□□□□ 0.31
LDHA-213ENST00000535451 PKD1L3Q7Z443 1732 aa16.97■□□□□ 0.31
LDHA-213ENST00000535451 WASHC2AQ641Q2 1341 aa16.96■□□□□ 0.31
LDHA-213ENST00000535451 PHKG2P15735 406 aa16.96■□□□□ 0.31
LDHA-213ENST00000535451 IFNL2Q8IZJ0 200 aa16.96■□□□□ 0.31
LDHA-213ENST00000535451 ATG3Q9NT62 314 aa16.96■□□□□ 0.31
LDHA-213ENST00000535451 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.96■□□□□ 0.31
LDHA-213ENST00000535451 KIF3CO14782 793 aa16.95■□□□□ 0.3
LDHA-213ENST00000535451 NCAPD2Q15021 1401 aa16.95■□□□□ 0.3
LDHA-213ENST00000535451 A0A0G2JLW4 131 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms