RNA–Protein interactions for RNA: ENST00000535318.6

CPNE2-202, Transcript of copine 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE2, Length 2,316 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2-202ENST00000535318 SETD1BQ9UPS6 1966 aaKnown RBP28.27■■■□□ 2.12
CPNE2-202ENST00000535318 MCM4P33991 863 aa28.27■■■□□ 2.12
CPNE2-202ENST00000535318 USP31Q70CQ4 1352 aa28.26■■■□□ 2.11
CPNE2-202ENST00000535318 RGS12O14924 1447 aa28.26■■■□□ 2.11
CPNE2-202ENST00000535318 KIF2CQ99661 725 aa28.26■■■□□ 2.11
CPNE2-202ENST00000535318 SNX21Q969T3 373 aa28.25■■■□□ 2.11
CPNE2-202ENST00000535318 DCTPP1Q9H773 170 aa28.25■■■□□ 2.11
CPNE2-202ENST00000535318 NALCNQ8IZF0 1738 aa28.24■■■□□ 2.11
CPNE2-202ENST00000535318 MIS18AQ9NYP9 233 aa28.24■■■□□ 2.11
CPNE2-202ENST00000535318 RGPD8O14715 1765 aaPredicted RBP28.24■■■□□ 2.11
CPNE2-202ENST00000535318 SSH2Q76I76 1423 aa28.23■■■□□ 2.11
CPNE2-202ENST00000535318 RGPD1P0DJD0 1748 aa28.23■■■□□ 2.11
CPNE2-202ENST00000535318 FOXO3O43524 673 aa28.23■■■□□ 2.11
CPNE2-202ENST00000535318 KIAA0232Q92628 1395 aa28.23■■■□□ 2.11
CPNE2-202ENST00000535318 MAP3K19Q56UN5 1328 aa28.23■■■□□ 2.11
CPNE2-202ENST00000535318 PLEKHM2Q8IWE5 1019 aa28.23■■■□□ 2.11
CPNE2-202ENST00000535318 GSPT1P15170 499 aaKnown RBP28.22■■■□□ 2.11
CPNE2-202ENST00000535318 NCOA3Q9Y6Q9 1424 aa28.22■■■□□ 2.11
CPNE2-202ENST00000535318 HAP1P54257 671 aaPredicted RBP28.21■■■□□ 2.11
CPNE2-202ENST00000535318 CRB1P82279 1406 aa28.21■■■□□ 2.11
CPNE2-202ENST00000535318 CHD2O14647 1828 aaKnown RBP28.21■■■□□ 2.11
CPNE2-202ENST00000535318 C16orf71Q8IYS4 520 aaPredicted RBP28.2■■■□□ 2.11
CPNE2-202ENST00000535318 ANKRD44Q8N8A2 993 aa28.2■■■□□ 2.11
CPNE2-202ENST00000535318 DDIT3P35638 169 aa28.2■■■□□ 2.1
CPNE2-202ENST00000535318 ATP10DQ9P241 1426 aa28.19■■■□□ 2.1
CPNE2-202ENST00000535318 MTHFSDQ2M296 383 aaKnown RBP28.19■■■□□ 2.1
CPNE2-202ENST00000535318 CDC45O75419 566 aa28.18■■■□□ 2.1
CPNE2-202ENST00000535318 MSH6P52701 1360 aa28.18■■■□□ 2.1
CPNE2-202ENST00000535318 CD2BP2O95400 341 aaKnown RBP28.18■■■□□ 2.1
CPNE2-202ENST00000535318 SLC4A2P04920 1241 aa28.18■■■□□ 2.1
CPNE2-202ENST00000535318 CEP85Q6P2H3 762 aa28.17■■■□□ 2.1
CPNE2-202ENST00000535318 ARHGEF10O15013 1369 aa28.17■■■□□ 2.1
CPNE2-202ENST00000535318 MEIS3Q99687 375 aa28.17■■■□□ 2.1
CPNE2-202ENST00000535318 RBM42Q9BTD8 480 aaKnown RBP28.17■■■□□ 2.1
CPNE2-202ENST00000535318 ANKARQ7Z5J8 1434 aa28.16■■■□□ 2.1
CPNE2-202ENST00000535318 PTPRCP08575 1304 aa28.16■■■□□ 2.1
CPNE2-202ENST00000535318 TTC21AQ8NDW8 1320 aa28.16■■■□□ 2.1
CPNE2-202ENST00000535318 HSP90AB1P08238 724 aaKnown RBP28.16■■■□□ 2.1
CPNE2-202ENST00000535318 FMN2Q9NZ56 1722 aa28.16■■■□□ 2.1
CPNE2-202ENST00000535318 RPAP2Q8IXW5 612 aaPredicted RBP28.15■■■□□ 2.1
CPNE2-202ENST00000535318 NGDNQ8NEJ9 315 aaKnown RBP28.15■■■□□ 2.1
CPNE2-202ENST00000535318 RTL1A6NKG5 1358 aa28.15■■■□□ 2.1
CPNE2-202ENST00000535318 OTUD7AQ8TE49 926 aaPredicted RBP28.15■■■□□ 2.1
CPNE2-202ENST00000535318 GZF1Q9H116 711 aaPredicted RBP28.14■■■□□ 2.09
CPNE2-202ENST00000535318 TTC22Q5TAA0 569 aa28.13■■■□□ 2.09
CPNE2-202ENST00000535318 FLT4P35916 1363 aa28.13■■■□□ 2.09
CPNE2-202ENST00000535318 G2E3Q7L622 706 aa28.13■■■□□ 2.09
CPNE2-202ENST00000535318 RTF1Q92541 710 aaKnown RBP28.13■■■□□ 2.09
CPNE2-202ENST00000535318 EYA1Q99502 592 aa28.13■■■□□ 2.09
CPNE2-202ENST00000535318 TSPYL4Q9UJ04 414 aa28.13■■■□□ 2.09
CPNE2-202ENST00000535318 SBNO1A3KN83 1393 aa28.13■■■□□ 2.09
CPNE2-202ENST00000535318 APBB1O00213 710 aa28.12■■■□□ 2.09
CPNE2-202ENST00000535318 NPHP4O75161 1426 aaPredicted RBP28.12■■■□□ 2.09
CPNE2-202ENST00000535318 SMARCA5O60264 1052 aaPredicted RBP28.12■■■□□ 2.09
CPNE2-202ENST00000535318 TRAK2O60296 914 aa28.12■■■□□ 2.09
CPNE2-202ENST00000535318 AMPHP49418 695 aa28.12■■■□□ 2.09
CPNE2-202ENST00000535318 FOXD4L1Q9NU39 408 aa28.1■■■□□ 2.09
CPNE2-202ENST00000535318 RBM33Q96EV2 1170 aaKnown RBP28.09■■■□□ 2.09
CPNE2-202ENST00000535318 KDRP35968 1356 aa28.09■■■□□ 2.09
CPNE2-202ENST00000535318 F6X3S4 739 aa28.09■■■□□ 2.09
CPNE2-202ENST00000535318 ARXQ96QS3 562 aa28.08■■■□□ 2.09
CPNE2-202ENST00000535318 SLC4A10Q6U841 1118 aa28.08■■■□□ 2.09
CPNE2-202ENST00000535318 TNPO1Q92973 898 aaKnown RBP28.08■■■□□ 2.09
CPNE2-202ENST00000535318 IGSF1Q8N6C5 1336 aa28.07■■■□□ 2.08
CPNE2-202ENST00000535318 K7ELQ4 463 aaPredicted RBP28.07■■■□□ 2.08
CPNE2-202ENST00000535318 L1TD1Q5T7N2 865 aaKnown RBP28.07■■■□□ 2.08
CPNE2-202ENST00000535318 PIK3C2AO00443 1686 aa28.06■■■□□ 2.08
CPNE2-202ENST00000535318 CIZ1Q9ULV3 898 aaPredicted RBP28.06■■■□□ 2.08
CPNE2-202ENST00000535318 HSP90AA1P07900 732 aaKnown RBP28.05■■■□□ 2.08
CPNE2-202ENST00000535318 NLRP6P59044 892 aa28.05■■■□□ 2.08
CPNE2-202ENST00000535318 NUTM2GQ5VZR2 741 aa28.05■■■□□ 2.08
CPNE2-202ENST00000535318 DDX11L8A8MPP1 907 aa28.04■■■□□ 2.08
CPNE2-202ENST00000535318 GAS2L2Q8NHY3 880 aa28.04■■■□□ 2.08
CPNE2-202ENST00000535318 SDSP20132 328 aa28.03■■■□□ 2.08
CPNE2-202ENST00000535318 RAB3GAP1Q15042 981 aa28.03■■■□□ 2.08
CPNE2-202ENST00000535318 FSD2A1L4K1 749 aa28.02■■■□□ 2.08
CPNE2-202ENST00000535318 GOLGA6L3A6NEY3 463 aa28.02■■■□□ 2.08
CPNE2-202ENST00000535318 ADGRL3Q9HAR2 1447 aa28.02■■■□□ 2.08
CPNE2-202ENST00000535318 USP26Q9BXU7 913 aa28.01■■■□□ 2.07
CPNE2-202ENST00000535318 XRCC6P12956 609 aaKnown RBP eCLIP28.01■■■□□ 2.07
CPNE2-202ENST00000535318 CCT4P50991 539 aaKnown RBP28■■■□□ 2.07
CPNE2-202ENST00000535318 HMMRO75330 724 aa27.98■■■□□ 2.07
CPNE2-202ENST00000535318 HOXC9P31274 260 aa27.98■■■□□ 2.07
CPNE2-202ENST00000535318 NECTIN2Q92692 538 aa27.97■■■□□ 2.07
CPNE2-202ENST00000535318 STK31Q9BXU1 1019 aa27.97■■■□□ 2.07
CPNE2-202ENST00000535318 PHF8Q9UPP1 1060 aa27.97■■■□□ 2.07
CPNE2-202ENST00000535318 GNAT3A8MTJ3 354 aa27.96■■■□□ 2.07
CPNE2-202ENST00000535318 MARF1Q9Y4F3 1742 aaKnown RBP27.96■■■□□ 2.07
CPNE2-202ENST00000535318 EIF5BO60841 1220 aaKnown RBP27.96■■■□□ 2.07
CPNE2-202ENST00000535318 RABEP1Q15276 862 aa27.96■■■□□ 2.07
CPNE2-202ENST00000535318 NWD1Q149M9 1564 aa27.95■■■□□ 2.07
CPNE2-202ENST00000535318 HTATSF1O43719 755 aaKnown RBP27.95■■■□□ 2.07
CPNE2-202ENST00000535318 LTV1Q96GA3 475 aaPredicted RBP27.95■■■□□ 2.07
CPNE2-202ENST00000535318 GBP4Q96PP9 640 aa27.95■■■□□ 2.07
CPNE2-202ENST00000535318 FLIIQ13045 1269 aa27.94■■■□□ 2.06
CPNE2-202ENST00000535318 GNAI2P04899 355 aa27.93■■■□□ 2.06
CPNE2-202ENST00000535318 IL17REQ8NFR9 667 aa27.93■■■□□ 2.06
CPNE2-202ENST00000535318 USP54Q70EL1 1684 aa27.93■■■□□ 2.06
CPNE2-202ENST00000535318 PANK2Q9BZ23 570 aa27.93■■■□□ 2.06
CPNE2-202ENST00000535318 EXOC6BQ9Y2D4 811 aa27.93■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms