RNA–Protein interactions for RNA: ENST00000533870.1

SOX6-217, Transcript of SRY-box 6, humanhuman

TSL 5

Gene SOX6, Length 7,224 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-217ENST00000533870 CCDC47Q96A33 483 aaKnown RBP4.79□□□□□ -1.64
SOX6-217ENST00000533870 SPAG1Q07617 926 aa4.79□□□□□ -1.64
SOX6-217ENST00000533870 DCTN1Q14203 1278 aa4.79□□□□□ -1.64
SOX6-217ENST00000533870 CFAP70Q5T0N1 1121 aa4.79□□□□□ -1.64
SOX6-217ENST00000533870 RRAGDQ9NQL2 400 aaPredicted RBP4.79□□□□□ -1.64
SOX6-217ENST00000533870 EIF2AK4Q9P2K8 1649 aaKnown RBP4.79□□□□□ -1.64
SOX6-217ENST00000533870 POLR3GO15318 223 aaPredicted RBP4.79□□□□□ -1.64
SOX6-217ENST00000533870 MX1P20591 662 aa4.79□□□□□ -1.64
SOX6-217ENST00000533870 NEXNQ0ZGT2 675 aa4.79□□□□□ -1.64
SOX6-217ENST00000533870 PTPN14Q15678 1187 aa4.79□□□□□ -1.64
SOX6-217ENST00000533870 TSR1Q2NL82 804 aaKnown RBP4.79□□□□□ -1.64
SOX6-217ENST00000533870 LRRCC1Q9C099 1032 aa4.79□□□□□ -1.64
SOX6-217ENST00000533870 ZSCAN16Q9H4T2 348 aaPredicted RBP4.79□□□□□ -1.64
SOX6-217ENST00000533870 BRD1O95696 1058 aa4.79□□□□□ -1.64
SOX6-217ENST00000533870 PYM1Q9BRP8 204 aaKnown RBP4.79□□□□□ -1.64
SOX6-217ENST00000533870 LAMC3Q9Y6N6 1575 aa4.79□□□□□ -1.64
SOX6-217ENST00000533870 TRIM6-TRIM34B2RNG4 842 aa4.79□□□□□ -1.64
SOX6-217ENST00000533870 TMED8Q6PL24 325 aaPredicted RBP4.79□□□□□ -1.64
SOX6-217ENST00000533870 SPRYD3Q8NCJ5 442 aa4.79□□□□□ -1.64
SOX6-217ENST00000533870 SIRT1Q96EB6 747 aa4.79□□□□□ -1.64
SOX6-217ENST00000533870 KIAA0232Q92628 1395 aa4.78□□□□□ -1.64
SOX6-217ENST00000533870 H3BQV1 296 aa4.78□□□□□ -1.64
SOX6-217ENST00000533870 C20orf194Q5TEA3 1177 aa4.78□□□□□ -1.64
SOX6-217ENST00000533870 IFFO2Q5TF58 517 aa4.78□□□□□ -1.64
SOX6-217ENST00000533870 RGS22Q8NE09 1264 aa4.78□□□□□ -1.64
SOX6-217ENST00000533870 TTC21BQ7Z4L5 1316 aa4.78□□□□□ -1.64
SOX6-217ENST00000533870 UBTFL1P0CB47 393 aaPredicted RBP4.78□□□□□ -1.64
SOX6-217ENST00000533870 CTNNA3Q9UI47 895 aa4.78□□□□□ -1.64
SOX6-217ENST00000533870 TULP1O00294 542 aaPredicted RBP4.78□□□□□ -1.64
SOX6-217ENST00000533870 FCHSD1Q86WN1 690 aa4.78□□□□□ -1.64
SOX6-217ENST00000533870 MRFAP1L1Q96HT8 127 aa4.78□□□□□ -1.64
SOX6-217ENST00000533870 DEF6Q9H4E7 631 aa4.78□□□□□ -1.64
SOX6-217ENST00000533870 OSBPL3Q9H4L5 887 aa4.78□□□□□ -1.64
SOX6-217ENST00000533870 NUP153P49790 1475 aaKnown RBP4.78□□□□□ -1.64
SOX6-217ENST00000533870 SLU7O95391 586 aaKnown RBP4.78□□□□□ -1.64
SOX6-217ENST00000533870 IFIT2P09913 472 aaKnown RBP4.78□□□□□ -1.64
SOX6-217ENST00000533870 SSFA2P28290 1259 aa4.78□□□□□ -1.64
SOX6-217ENST00000533870 PRKAR2BP31323 418 aa4.78□□□□□ -1.64
SOX6-217ENST00000533870 HOMER1Q86YM7 354 aa4.78□□□□□ -1.64
SOX6-217ENST00000533870 ARHGAP31Q2M1Z3 1444 aa4.78□□□□□ -1.64
SOX6-217ENST00000533870 CDKL5O76039 1030 aa4.78□□□□□ -1.64
SOX6-217ENST00000533870 ZSCAN23Q3MJ62 389 aa4.78□□□□□ -1.64
SOX6-217ENST00000533870 SDF4Q9BRK5 362 aa4.78□□□□□ -1.64
SOX6-217ENST00000533870 LUC7LQ9NQ29 371 aaKnown RBP4.78□□□□□ -1.64
SOX6-217ENST00000533870 PCDHB15Q9Y5E8 787 aa4.78□□□□□ -1.64
SOX6-217ENST00000533870 MAP9Q49MG5 647 aa4.78□□□□□ -1.64
SOX6-217ENST00000533870 SMARCE1Q969G3 411 aa4.78□□□□□ -1.64
SOX6-217ENST00000533870 KIF1BPQ96EK5 621 aa4.78□□□□□ -1.64
SOX6-217ENST00000533870 BCL2L13Q9BXK5 485 aa4.78□□□□□ -1.64
SOX6-217ENST00000533870 TTC41PQ6P2S7 1318 aa4.78□□□□□ -1.65
SOX6-217ENST00000533870 NSD3Q9BZ95 1437 aa4.77□□□□□ -1.65
SOX6-217ENST00000533870 GTF2F1P35269 517 aaKnown RBP eCLIP4.77□□□□□ -1.65
SOX6-217ENST00000533870 KCNJ6P48051 423 aa4.77□□□□□ -1.65
SOX6-217ENST00000533870 SYNE3Q6ZMZ3 975 aa4.77□□□□□ -1.65
SOX6-217ENST00000533870 TMEM87AQ8NBN3 555 aa4.77□□□□□ -1.65
SOX6-217ENST00000533870 EHBP1Q8NDI1 1231 aa4.77□□□□□ -1.65
SOX6-217ENST00000533870 TNMDQ9H2S6 317 aa4.77□□□□□ -1.65
SOX6-217ENST00000533870 BMP15O95972 392 aa4.77□□□□□ -1.65
SOX6-217ENST00000533870 G3BP1Q13283 466 aaKnown RBP eCLIP4.77□□□□□ -1.65
SOX6-217ENST00000533870 TMEM57Q8N5G2 664 aa4.77□□□□□ -1.65
SOX6-217ENST00000533870 TRAK1Q9UPV9 953 aa4.77□□□□□ -1.65
SOX6-217ENST00000533870 VPS37CA5D8V6 355 aaPredicted RBP4.77□□□□□ -1.65
SOX6-217ENST00000533870 ALDH1L1O75891 902 aa4.77□□□□□ -1.65
SOX6-217ENST00000533870 IGHDP01880 384 aa4.77□□□□□ -1.65
SOX6-217ENST00000533870 GRIN2AQ12879 1464 aa4.77□□□□□ -1.65
SOX6-217ENST00000533870 TPD52L1Q16890 204 aaPredicted RBP4.77□□□□□ -1.65
SOX6-217ENST00000533870 TBC1D9Q6ZT07 1266 aa4.77□□□□□ -1.65
SOX6-217ENST00000533870 ANKRD24Q8TF21 1146 aa4.77□□□□□ -1.65
SOX6-217ENST00000533870 REREQ9P2R6 1566 aa4.77□□□□□ -1.65
SOX6-217ENST00000533870 SAFBQ15424 915 aaKnown RBP eCLIP4.77□□□□□ -1.65
SOX6-217ENST00000533870 BLOC1S2Q6QNY1 142 aa4.77□□□□□ -1.65
SOX6-217ENST00000533870 RRP7AQ9Y3A4 280 aaKnown RBP4.77□□□□□ -1.65
SOX6-217ENST00000533870 CPLX1O14810 134 aa4.77□□□□□ -1.65
SOX6-217ENST00000533870 OLFM4Q6UX06 510 aa4.77□□□□□ -1.65
SOX6-217ENST00000533870 RNF214Q8ND24 703 aa4.77□□□□□ -1.65
SOX6-217ENST00000533870 MYOM2P54296 1465 aa4.77□□□□□ -1.65
SOX6-217ENST00000533870 WDR7Q9Y4E6 1490 aa4.77□□□□□ -1.65
SOX6-217ENST00000533870 FILIP1LQ4L180 1135 aa4.76□□□□□ -1.65
SOX6-217ENST00000533870 DISP3Q9P2K9 1392 aa4.76□□□□□ -1.65
SOX6-217ENST00000533870 CUL4AQ13619 759 aa4.76□□□□□ -1.65
SOX6-217ENST00000533870 ARFGAP2Q8N6H7 521 aa4.76□□□□□ -1.65
SOX6-217ENST00000533870 NOB1Q9ULX3 412 aaKnown RBP4.76□□□□□ -1.65
SOX6-217ENST00000533870 MSH6P52701 1360 aa4.76□□□□□ -1.65
SOX6-217ENST00000533870 ZSCAN22P10073 491 aaPredicted RBP4.76□□□□□ -1.65
SOX6-217ENST00000533870 HSP90B1P14625 803 aaKnown RBP4.76□□□□□ -1.65
SOX6-217ENST00000533870 FKBP5Q13451 457 aaPredicted RBP4.76□□□□□ -1.65
SOX6-217ENST00000533870 WASF1Q92558 559 aa4.76□□□□□ -1.65
SOX6-217ENST00000533870 IQCDQ96DY2 449 aa4.76□□□□□ -1.65
SOX6-217ENST00000533870 RPGRIP1Q96KN7 1286 aa4.76□□□□□ -1.65
SOX6-217ENST00000533870 SPATA32Q96LK8 384 aa4.76□□□□□ -1.65
SOX6-217ENST00000533870 CFAP43Q8NDM7 1665 aa4.76□□□□□ -1.65
SOX6-217ENST00000533870 CLASP1Q7Z460 1538 aa4.76□□□□□ -1.65
SOX6-217ENST00000533870 SYCE3A1L190 88 aa4.76□□□□□ -1.65
SOX6-217ENST00000533870 GNL2Q13823 731 aaKnown RBP4.76□□□□□ -1.65
SOX6-217ENST00000533870 PLCH2O75038 1416 aa4.76□□□□□ -1.65
SOX6-217ENST00000533870 STX6O43752 255 aa4.76□□□□□ -1.65
SOX6-217ENST00000533870 LARP1BQ659C4 914 aaKnown RBP4.76□□□□□ -1.65
SOX6-217ENST00000533870 TACO1Q9BSH4 297 aaKnown RBP4.76□□□□□ -1.65
SOX6-217ENST00000533870 UPF3BQ9BZI7 483 aaKnown RBP4.76□□□□□ -1.65
SOX6-217ENST00000533870 ZNF165P49910 485 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms