RNA–Protein interactions for RNA: ENST00000533194.5

CCT3-216, Transcript of chaperonin containing TCP1 subunit 3, humanhuman

TSL 3

Gene CCT3, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT3-216ENST00000533194 CD163L1Q9NR16 1453 aa10.11□□□□□ -0.79
CCT3-216ENST00000533194 CGNL1Q0VF96 1302 aa10.11□□□□□ -0.79
CCT3-216ENST00000533194 MAP3K19Q56UN5 1328 aa10.11□□□□□ -0.79
CCT3-216ENST00000533194 PAPPAQ13219 1627 aa10.11□□□□□ -0.79
CCT3-216ENST00000533194 TATP17735 454 aaPredicted RBP10.1□□□□□ -0.79
CCT3-216ENST00000533194 KCNQ4P56696 695 aa10.1□□□□□ -0.79
CCT3-216ENST00000533194 FLAD1Q8NFF5 587 aa10.1□□□□□ -0.79
CCT3-216ENST00000533194 RTL1A6NKG5 1358 aa10.1□□□□□ -0.79
CCT3-216ENST00000533194 NLGN2Q8NFZ4 835 aa10.09□□□□□ -0.79
CCT3-216ENST00000533194 RGPD5Q99666 1765 aa10.09□□□□□ -0.79
CCT3-216ENST00000533194 PCDH11XQ9BZA7 1347 aa10.08□□□□□ -0.8
CCT3-216ENST00000533194 PCDH11YQ9BZA8 1340 aa10.08□□□□□ -0.8
CCT3-216ENST00000533194 BTAF1O14981 1849 aa10.08□□□□□ -0.8
CCT3-216ENST00000533194 MSL1Q68DK7 614 aa10.08□□□□□ -0.8
CCT3-216ENST00000533194 AK7Q96M32 723 aa10.08□□□□□ -0.8
CCT3-216ENST00000533194 USP54Q70EL1 1684 aa10.08□□□□□ -0.8
CCT3-216ENST00000533194 FAM208AQ9UK61 1670 aaKnown RBP10.07□□□□□ -0.8
CCT3-216ENST00000533194 ST20-MTHFSA0A0A6YYL1 179 aa10.07□□□□□ -0.8
CCT3-216ENST00000533194 TMF1P82094 1093 aa10.07□□□□□ -0.8
CCT3-216ENST00000533194 CDCA8Q53HL2 280 aa10.07□□□□□ -0.8
CCT3-216ENST00000533194 SMARCC1Q92922 1105 aaPredicted RBP10.07□□□□□ -0.8
CCT3-216ENST00000533194 NSD2O96028 1365 aa10.06□□□□□ -0.8
CCT3-216ENST00000533194 RRS1Q15050 365 aaKnown RBP10.06□□□□□ -0.8
CCT3-216ENST00000533194 COL23A1Q86Y22 540 aaPredicted RBP10.06□□□□□ -0.8
CCT3-216ENST00000533194 USHBP1Q8N6Y0 703 aa10.06□□□□□ -0.8
CCT3-216ENST00000533194 GGNBP2Q9H3C7 697 aa10.06□□□□□ -0.8
CCT3-216ENST00000533194 CD2APQ9Y5K6 639 aa10.06□□□□□ -0.8
CCT3-216ENST00000533194 MEGF6O75095 1541 aa10.06□□□□□ -0.8
CCT3-216ENST00000533194 NSD3Q9BZ95 1437 aa10.06□□□□□ -0.8
CCT3-216ENST00000533194 LTN1O94822 1766 aa10.06□□□□□ -0.8
CCT3-216ENST00000533194 PALLDQ8WX93 1383 aa10.05□□□□□ -0.8
CCT3-216ENST00000533194 NBPF6Q5VWK0 638 aa10.05□□□□□ -0.8
CCT3-216ENST00000533194 MPRIPQ6WCQ1 1025 aa10.05□□□□□ -0.8
CCT3-216ENST00000533194 NBPF4Q96M43 638 aa10.05□□□□□ -0.8
CCT3-216ENST00000533194 GPBP1L1Q9HC44 474 aaPredicted RBP10.05□□□□□ -0.8
CCT3-216ENST00000533194 FLT4P35916 1363 aa10.04□□□□□ -0.8
CCT3-216ENST00000533194 YBX3P16989 372 aaKnown RBP eCLIP10.04□□□□□ -0.86e-12■■■□□ 18.7
CCT3-216ENST00000533194 TESK2Q96S53 571 aa10.04□□□□□ -0.8
CCT3-216ENST00000533194 INSRP06213 1382 aa10.03□□□□□ -0.8
CCT3-216ENST00000533194 KIF24Q5T7B8 1368 aa10.03□□□□□ -0.8
CCT3-216ENST00000533194 FYB1O15117 783 aa10.03□□□□□ -0.8
CCT3-216ENST00000533194 PHF14O94880 888 aa10.03□□□□□ -0.8
CCT3-216ENST00000533194 FBLN1P23142 703 aa10.03□□□□□ -0.8
CCT3-216ENST00000533194 SPG7Q9UQ90 795 aa10.03□□□□□ -0.8
CCT3-216ENST00000533194 DOT1LQ8TEK3 1739 aa10.02□□□□□ -0.8
CCT3-216ENST00000533194 ATP10DQ9P241 1426 aa10.02□□□□□ -0.81
CCT3-216ENST00000533194 PPM1GO15355 546 aaPredicted RBP10.02□□□□□ -0.81
CCT3-216ENST00000533194 HSP90AB2PQ58FF8 381 aa10.02□□□□□ -0.81
CCT3-216ENST00000533194 ZNF526Q8TF50 670 aaPredicted RBP10.02□□□□□ -0.81
CCT3-216ENST00000533194 TMOD3Q9NYL9 352 aa10.01□□□□□ -0.81
CCT3-216ENST00000533194 QSER1Q2KHR3 1735 aa10.01□□□□□ -0.81
CCT3-216ENST00000533194 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10□□□□□ -0.81
CCT3-216ENST00000533194 SSFA2P28290 1259 aa10□□□□□ -0.81
CCT3-216ENST00000533194 LOC102724428A0A0B4J2F2 783 aa9.99□□□□□ -0.81
CCT3-216ENST00000533194 GNPATO15228 680 aa9.99□□□□□ -0.81
CCT3-216ENST00000533194 CYP27B1O15528 508 aa9.99□□□□□ -0.81
CCT3-216ENST00000533194 SIK1P57059 783 aa9.99□□□□□ -0.81
CCT3-216ENST00000533194 IFFO2Q5TF58 517 aa9.99□□□□□ -0.81
CCT3-216ENST00000533194 IGSF1Q8N6C5 1336 aa9.99□□□□□ -0.81
CCT3-216ENST00000533194 UTRNP46939 3433 aa9.98□□□□□ -0.81
CCT3-216ENST00000533194 PIGBQ92521 554 aa9.98□□□□□ -0.81
CCT3-216ENST00000533194 WWC3Q9ULE0 1092 aa9.98□□□□□ -0.81
CCT3-216ENST00000533194 CHD4Q14839 1912 aa9.97□□□□□ -0.81
CCT3-216ENST00000533194 LY75O60449 1722 aa9.97□□□□□ -0.81
CCT3-216ENST00000533194 HSPA6P17066 643 aa9.97□□□□□ -0.81
CCT3-216ENST00000533194 IFNL2Q8IZJ0 200 aa9.97□□□□□ -0.81
CCT3-216ENST00000533194 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.97□□□□□ -0.813e-9■■□□□ 13
CCT3-216ENST00000533194 EMILIN1Q9Y6C2 1016 aa9.97□□□□□ -0.81
CCT3-216ENST00000533194 SHANK3Q9BYB0 1731 aa9.96□□□□□ -0.81
CCT3-216ENST00000533194 ATP6V1AP38606 617 aa9.96□□□□□ -0.82
CCT3-216ENST00000533194 NKX1-1Q15270 411 aaPredicted RBP9.96□□□□□ -0.82
CCT3-216ENST00000533194 POLR3GLQ9BT43 218 aa9.96□□□□□ -0.82
CCT3-216ENST00000533194 HSP90AB1P08238 724 aaKnown RBP9.95□□□□□ -0.82
CCT3-216ENST00000533194 MMP10P09238 476 aa9.95□□□□□ -0.82
CCT3-216ENST00000533194 LINC00116Q8NCU8 138 aa9.95□□□□□ -0.82
CCT3-216ENST00000533194 RTCBQ9Y3I0 505 aaKnown RBP9.95□□□□□ -0.82
CCT3-216ENST00000533194 COL24A1Q17RW2 1714 aa9.94□□□□□ -0.82
CCT3-216ENST00000533194 C5P01031 1676 aa9.94□□□□□ -0.82
CCT3-216ENST00000533194 ADCY9O60503 1353 aa9.94□□□□□ -0.82
CCT3-216ENST00000533194 WASHC2AQ641Q2 1341 aa9.94□□□□□ -0.82
CCT3-216ENST00000533194 PHKG2P15735 406 aa9.94□□□□□ -0.82
CCT3-216ENST00000533194 TRAPPC3LQ5T215 181 aa9.94□□□□□ -0.82
CCT3-216ENST00000533194 NLGN1Q8N2Q7 840 aa9.94□□□□□ -0.82
CCT3-216ENST00000533194 RBM42Q9BTD8 480 aaKnown RBP9.94□□□□□ -0.82
CCT3-216ENST00000533194 CCDC87Q9NVE4 849 aa9.94□□□□□ -0.82
CCT3-216ENST00000533194 ASAP1Q9ULH1 1129 aa9.94□□□□□ -0.82
CCT3-216ENST00000533194 C4BP0C0L5 1744 aa9.93□□□□□ -0.82
CCT3-216ENST00000533194 ADRA2BP18089 450 aa9.93□□□□□ -0.82
CCT3-216ENST00000533194 RFC4P35249 363 aa9.93□□□□□ -0.82
CCT3-216ENST00000533194 TGFB2P61812 414 aa9.93□□□□□ -0.82
CCT3-216ENST00000533194 SMIM5Q71RC9 77 aa9.93□□□□□ -0.82
CCT3-216ENST00000533194 C16orf71Q8IYS4 520 aaPredicted RBP9.93□□□□□ -0.82
CCT3-216ENST00000533194 EYA1Q99502 592 aa9.93□□□□□ -0.82
CCT3-216ENST00000533194 BCS1LQ9Y276 419 aa9.93□□□□□ -0.82
CCT3-216ENST00000533194 PARP3Q9Y6F1 533 aa9.93□□□□□ -0.82
CCT3-216ENST00000533194 TUBGCP6Q96RT7 1819 aa9.93□□□□□ -0.82
CCT3-216ENST00000533194 TNNT2P45379 298 aaPredicted RBP9.92□□□□□ -0.82
CCT3-216ENST00000533194 ARHGAP27Q6ZUM4 889 aa9.92□□□□□ -0.82
CCT3-216ENST00000533194 AMIGO3Q86WK7 504 aa9.92□□□□□ -0.82
CCT3-216ENST00000533194 CARD14Q9BXL6 1004 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms