RNA–Protein interactions for RNA: ENST00000533096.5

COPB1-209, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-209ENST00000533096 GRIN3BO60391 1043 aa18.35■□□□□ 0.53
COPB1-209ENST00000533096 ABCC6O95255 1503 aa18.34■□□□□ 0.53
COPB1-209ENST00000533096 ANKRD36BQ8N2N9 1353 aa18.34■□□□□ 0.53
COPB1-209ENST00000533096 ST20-MTHFSA0A0A6YYL1 179 aa18.34■□□□□ 0.53
COPB1-209ENST00000533096 RAPGEF4Q8WZA2 1011 aa18.33■□□□□ 0.52
COPB1-209ENST00000533096 GGNBP2Q9H3C7 697 aa18.33■□□□□ 0.52
COPB1-209ENST00000533096 NHSQ6T4R5 1651 aa18.33■□□□□ 0.52
COPB1-209ENST00000533096 USP47Q96K76 1375 aa18.32■□□□□ 0.52
COPB1-209ENST00000533096 MPRIPQ6WCQ1 1025 aa18.32■□□□□ 0.52
COPB1-209ENST00000533096 PUS7Q96PZ0 661 aaKnown RBP18.32■□□□□ 0.52
COPB1-209ENST00000533096 WWC3Q9ULE0 1092 aa18.32■□□□□ 0.52
COPB1-209ENST00000533096 WNK3Q9BYP7 1800 aa18.32■□□□□ 0.52
COPB1-209ENST00000533096 TATP17735 454 aaPredicted RBP18.31■□□□□ 0.52
COPB1-209ENST00000533096 SMIM5Q71RC9 77 aa18.3■□□□□ 0.52
COPB1-209ENST00000533096 ZNF526Q8TF50 670 aaPredicted RBP18.3■□□□□ 0.52
COPB1-209ENST00000533096 TONSLQ96HA7 1378 aa18.3■□□□□ 0.52
COPB1-209ENST00000533096 FYB1O15117 783 aa18.28■□□□□ 0.52
COPB1-209ENST00000533096 HSP90AB2PQ58FF8 381 aa18.28■□□□□ 0.52
COPB1-209ENST00000533096 TESK2Q96S53 571 aa18.28■□□□□ 0.52
COPB1-209ENST00000533096 NSD2O96028 1365 aa18.28■□□□□ 0.52
COPB1-209ENST00000533096 BTAF1O14981 1849 aa18.28■□□□□ 0.52
COPB1-209ENST00000533096 KAT6BQ8WYB5 2073 aa18.27■□□□□ 0.51
COPB1-209ENST00000533096 PAPPAQ13219 1627 aa18.27■□□□□ 0.51
COPB1-209ENST00000533096 PHF14O94880 888 aa18.26■□□□□ 0.51
COPB1-209ENST00000533096 PPM1GO15355 546 aaPredicted RBP18.25■□□□□ 0.51
COPB1-209ENST00000533096 FLAD1Q8NFF5 587 aa18.25■□□□□ 0.51
COPB1-209ENST00000533096 GPBP1L1Q9HC44 474 aaPredicted RBP18.25■□□□□ 0.51
COPB1-209ENST00000533096 CD2APQ9Y5K6 639 aa18.25■□□□□ 0.51
COPB1-209ENST00000533096 MEGF6O75095 1541 aa18.24■□□□□ 0.51
COPB1-209ENST00000533096 MON2Q7Z3U7 1717 aa18.24■□□□□ 0.51
COPB1-209ENST00000533096 AK7Q96M32 723 aa18.24■□□□□ 0.51
COPB1-209ENST00000533096 UTRNP46939 3433 aa18.23■□□□□ 0.51
COPB1-209ENST00000533096 CGNL1Q0VF96 1302 aa18.23■□□□□ 0.51
COPB1-209ENST00000533096 SLC24A1O60721 1099 aa18.22■□□□□ 0.51
COPB1-209ENST00000533096 IFFO2Q5TF58 517 aa18.22■□□□□ 0.51
COPB1-209ENST00000533096 PALLDQ8WX93 1383 aa18.21■□□□□ 0.51
COPB1-209ENST00000533096 CYP27B1O15528 508 aa18.21■□□□□ 0.51
COPB1-209ENST00000533096 TMF1P82094 1093 aa18.21■□□□□ 0.51
COPB1-209ENST00000533096 SMARCC1Q92922 1105 aaPredicted RBP18.21■□□□□ 0.51
COPB1-209ENST00000533096 LTN1O94822 1766 aa18.21■□□□□ 0.51
COPB1-209ENST00000533096 PCDH11XQ9BZA7 1347 aa18.21■□□□□ 0.51
COPB1-209ENST00000533096 PCDH11YQ9BZA8 1340 aa18.21■□□□□ 0.51
COPB1-209ENST00000533096 HMGB2P26583 209 aaKnown RBP18.2■□□□□ 0.5
COPB1-209ENST00000533096 AMIGO3Q86WK7 504 aa18.2■□□□□ 0.5
COPB1-209ENST00000533096 PIGBQ92521 554 aa18.2■□□□□ 0.5
COPB1-209ENST00000533096 ATP10DQ9P241 1426 aa18.2■□□□□ 0.5
COPB1-209ENST00000533096 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.19■□□□□ 0.5
COPB1-209ENST00000533096 SMG6Q86US8 1419 aaKnown RBP18.19■□□□□ 0.5
COPB1-209ENST00000533096 EMILIN1Q9Y6C2 1016 aa18.17■□□□□ 0.5
COPB1-209ENST00000533096 SPG7Q9UQ90 795 aa18.16■□□□□ 0.5
COPB1-209ENST00000533096 IGSF1Q8N6C5 1336 aa18.16■□□□□ 0.5
COPB1-209ENST00000533096 CHD4Q14839 1912 aa18.15■□□□□ 0.5
COPB1-209ENST00000533096 RTL1A6NKG5 1358 aa18.15■□□□□ 0.5
COPB1-209ENST00000533096 INSRP06213 1382 aa18.15■□□□□ 0.5
COPB1-209ENST00000533096 LOC102724428A0A0B4J2F2 783 aa18.14■□□□□ 0.49
COPB1-209ENST00000533096 SIK1P57059 783 aa18.14■□□□□ 0.49
COPB1-209ENST00000533096 LINC00116Q8NCU8 138 aa18.14■□□□□ 0.49
COPB1-209ENST00000533096 CARD14Q9BXL6 1004 aa18.14■□□□□ 0.49
COPB1-209ENST00000533096 ASAP1Q9ULH1 1129 aa18.14■□□□□ 0.49
COPB1-209ENST00000533096 USP54Q70EL1 1684 aa18.13■□□□□ 0.49
COPB1-209ENST00000533096 GNPATO15228 680 aa18.13■□□□□ 0.49
COPB1-209ENST00000533096 ATP6V1AP38606 617 aa18.13■□□□□ 0.49
COPB1-209ENST00000533096 TMOD3Q9NYL9 352 aa18.13■□□□□ 0.49
COPB1-209ENST00000533096 HSPA6P17066 643 aa18.12■□□□□ 0.49
COPB1-209ENST00000533096 POLR3GLQ9BT43 218 aa18.12■□□□□ 0.49
COPB1-209ENST00000533096 CDCA8Q53HL2 280 aa18.11■□□□□ 0.49
COPB1-209ENST00000533096 FLT4P35916 1363 aa18.11■□□□□ 0.49
COPB1-209ENST00000533096 DOT1LQ8TEK3 1739 aa18.1■□□□□ 0.49
COPB1-209ENST00000533096 TNNT2P45379 298 aaPredicted RBP18.1■□□□□ 0.49
COPB1-209ENST00000533096 ITPK1Q13572 414 aa18.1■□□□□ 0.49
COPB1-209ENST00000533096 NKX1-1Q15270 411 aaPredicted RBP18.1■□□□□ 0.49
COPB1-209ENST00000533096 EYA1Q99502 592 aa18.1■□□□□ 0.49
COPB1-209ENST00000533096 A0A0G2JLW4 131 aa18.09■□□□□ 0.49
COPB1-209ENST00000533096 MMP10P09238 476 aa18.09■□□□□ 0.49
COPB1-209ENST00000533096 SSFA2P28290 1259 aa18.09■□□□□ 0.49
COPB1-209ENST00000533096 ARHGAP27Q6ZUM4 889 aa18.09■□□□□ 0.49
COPB1-209ENST00000533096 SHANK3Q9BYB0 1731 aa18.09■□□□□ 0.49
COPB1-209ENST00000533096 FAM208AQ9UK61 1670 aaKnown RBP18.09■□□□□ 0.49
COPB1-209ENST00000533096 TRAPPC3LQ5T215 181 aa18.08■□□□□ 0.48
COPB1-209ENST00000533096 IFNL2Q8IZJ0 200 aa18.08■□□□□ 0.48
COPB1-209ENST00000533096 RBM42Q9BTD8 480 aaKnown RBP18.08■□□□□ 0.48
COPB1-209ENST00000533096 ATG3Q9NT62 314 aa18.08■□□□□ 0.48
COPB1-209ENST00000533096 BCS1LQ9Y276 419 aa18.08■□□□□ 0.48
COPB1-209ENST00000533096 PHKG2P15735 406 aa18.06■□□□□ 0.48
COPB1-209ENST00000533096 RGPD2P0DJD1 1756 aa18.06■□□□□ 0.48
COPB1-209ENST00000533096 LY75O60449 1722 aa18.06■□□□□ 0.48
COPB1-209ENST00000533096 KIF3CO14782 793 aa18.05■□□□□ 0.48
COPB1-209ENST00000533096 RTCBQ9Y3I0 505 aaKnown RBP18.05■□□□□ 0.48
COPB1-209ENST00000533096 WASHC2AQ641Q2 1341 aa18.04■□□□□ 0.48
COPB1-209ENST00000533096 QSER1Q2KHR3 1735 aa18.04■□□□□ 0.48
COPB1-209ENST00000533096 POLKQ9UBT6 870 aa18.04■□□□□ 0.48
COPB1-209ENST00000533096 TUBGCP6Q96RT7 1819 aa18.04■□□□□ 0.48
COPB1-209ENST00000533096 NLGN1Q8N2Q7 840 aa18.03■□□□□ 0.48
COPB1-209ENST00000533096 ARHGEF1Q92888 912 aaKnown RBP18.03■□□□□ 0.48
COPB1-209ENST00000533096 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.03■□□□□ 0.48
COPB1-209ENST00000533096 KIF24Q5T7B8 1368 aa18.03■□□□□ 0.48
COPB1-209ENST00000533096 FCHSD2O94868 740 aa18.02■□□□□ 0.48
COPB1-209ENST00000533096 DPEP1P16444 411 aa18.02■□□□□ 0.48
COPB1-209ENST00000533096 RFC4P35249 363 aa18.02■□□□□ 0.48
COPB1-209ENST00000533096 COL24A1Q17RW2 1714 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms