RNA–Protein interactions for RNA: ENST00000533063.5

GSDMD-212, Transcript of gasdermin D, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GSDMD, Length 1,800 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-212ENST00000533063 MYH16Q9H6N6 1097 aa26.47■■□□□ 1.83
GSDMD-212ENST00000533063 STRN4Q9NRL3 753 aa26.47■■□□□ 1.83
GSDMD-212ENST00000533063 MAP3K5Q99683 1374 aa26.47■■□□□ 1.83
GSDMD-212ENST00000533063 PKD1L3Q7Z443 1732 aa26.47■■□□□ 1.83
GSDMD-212ENST00000533063 RNF123Q5XPI4 1314 aa26.47■■□□□ 1.83
GSDMD-212ENST00000533063 TOM1L2Q6ZVM7 507 aa26.46■■□□□ 1.83
GSDMD-212ENST00000533063 CRB1P82279 1406 aa26.46■■□□□ 1.83
GSDMD-212ENST00000533063 NUTM2BA6NNL0 878 aaPredicted RBP26.46■■□□□ 1.83
GSDMD-212ENST00000533063 NUTM2EB1AL46 878 aaPredicted RBP26.46■■□□□ 1.83
GSDMD-212ENST00000533063 HSPA1LP34931 641 aa26.46■■□□□ 1.83
GSDMD-212ENST00000533063 NUTM2AQ8IVF1 878 aaPredicted RBP26.46■■□□□ 1.83
GSDMD-212ENST00000533063 GNAT3A8MTJ3 354 aa26.45■■□□□ 1.82
GSDMD-212ENST00000533063 CARD10Q9BWT7 1032 aa26.45■■□□□ 1.82
GSDMD-212ENST00000533063 HTATSF1O43719 755 aaKnown RBP26.44■■□□□ 1.82
GSDMD-212ENST00000533063 AMOTQ4VCS5 1084 aa26.44■■□□□ 1.82
GSDMD-212ENST00000533063 PLEKHO1Q53GL0 409 aaPredicted RBP26.44■■□□□ 1.82
GSDMD-212ENST00000533063 PARP4Q9UKK3 1724 aaKnown RBP26.44■■□□□ 1.82
GSDMD-212ENST00000533063 EVA1CP58658 441 aa26.44■■□□□ 1.82
GSDMD-212ENST00000533063 CALD1Q05682 793 aaKnown RBP26.44■■□□□ 1.82
GSDMD-212ENST00000533063 RAPGEF4Q8WZA2 1011 aa26.44■■□□□ 1.82
GSDMD-212ENST00000533063 IFT57Q9NWB7 429 aa26.44■■□□□ 1.82
GSDMD-212ENST00000533063 PLEKHG2Q9H7P9 1386 aa26.43■■□□□ 1.82
GSDMD-212ENST00000533063 IL17REQ8NFR9 667 aa26.43■■□□□ 1.82
GSDMD-212ENST00000533063 NWD2Q9ULI1 1742 aa26.42■■□□□ 1.82
GSDMD-212ENST00000533063 CFAP44Q96MT7 982 aa26.42■■□□□ 1.82
GSDMD-212ENST00000533063 RTF1Q92541 710 aaKnown RBP26.42■■□□□ 1.82
GSDMD-212ENST00000533063 LRP6O75581 1613 aa26.41■■□□□ 1.82
GSDMD-212ENST00000533063 OVOS2A0A0G2JMS6 1433 aa26.41■■□□□ 1.82
GSDMD-212ENST00000533063 ADAMTS7Q9UKP4 1686 aa26.41■■□□□ 1.82
GSDMD-212ENST00000533063 ZNF530Q6P9A1 599 aaPredicted RBP26.41■■□□□ 1.82
GSDMD-212ENST00000533063 SLIT2O94813 1529 aa26.41■■□□□ 1.82
GSDMD-212ENST00000533063 TATP17735 454 aaPredicted RBP26.4■■□□□ 1.82
GSDMD-212ENST00000533063 GNAI1P63096 354 aa26.4■■□□□ 1.82
GSDMD-212ENST00000533063 MBIPQ9NS73 344 aa26.4■■□□□ 1.82
GSDMD-212ENST00000533063 LAS1LQ9Y4W2 734 aaKnown RBP26.4■■□□□ 1.82
GSDMD-212ENST00000533063 CEMIPQ8WUJ3 1361 aa26.4■■□□□ 1.82
GSDMD-212ENST00000533063 AKAP4Q5JQC9 854 aa26.39■■□□□ 1.82
GSDMD-212ENST00000533063 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.39■■□□□ 1.82
GSDMD-212ENST00000533063 SHANK3Q9BYB0 1731 aa26.39■■□□□ 1.82
GSDMD-212ENST00000533063 EXOSC9Q06265 439 aaKnown RBP26.38■■□□□ 1.81
GSDMD-212ENST00000533063 SPATA31A6Q5VVP1 1343 aa26.37■■□□□ 1.81
GSDMD-212ENST00000533063 CHL1O00533 1208 aa26.37■■□□□ 1.81
GSDMD-212ENST00000533063 LGR6Q9HBX8 967 aa26.36■■□□□ 1.81
GSDMD-212ENST00000533063 WNK3Q9BYP7 1800 aa26.36■■□□□ 1.81
GSDMD-212ENST00000533063 SCN11AQ9UI33 1791 aa26.35■■□□□ 1.81
GSDMD-212ENST00000533063 MPRIPQ6WCQ1 1025 aa26.34■■□□□ 1.81
GSDMD-212ENST00000533063 USP35Q9P2H5 1018 aa26.34■■□□□ 1.81
GSDMD-212ENST00000533063 SIPA1L3O60292 1781 aaPredicted RBP26.34■■□□□ 1.81
GSDMD-212ENST00000533063 CYP27B1O15528 508 aa26.33■■□□□ 1.81
GSDMD-212ENST00000533063 IL2RBP14784 551 aa26.33■■□□□ 1.81
GSDMD-212ENST00000533063 C1orf141Q5JVX7 400 aa26.33■■□□□ 1.81
GSDMD-212ENST00000533063 SPG7Q9UQ90 795 aa26.33■■□□□ 1.81
GSDMD-212ENST00000533063 DISP2A7MBM2 1401 aa26.33■■□□□ 1.81
GSDMD-212ENST00000533063 RRP1P56182 461 aaKnown RBP26.32■■□□□ 1.8
GSDMD-212ENST00000533063 IRX6P78412 446 aaPredicted RBP26.32■■□□□ 1.8
GSDMD-212ENST00000533063 PHKG2P15735 406 aa26.32■■□□□ 1.8
GSDMD-212ENST00000533063 MIS18AQ9NYP9 233 aa26.32■■□□□ 1.8
GSDMD-212ENST00000533063 FKBP8Q14318 412 aa26.31■■□□□ 1.8
GSDMD-212ENST00000533063 KDM6AO15550 1401 aaPredicted RBP26.31■■□□□ 1.8
GSDMD-212ENST00000533063 BCL9LQ86UU0 1499 aa26.3■■□□□ 1.8
GSDMD-212ENST00000533063 RNMTO43148 476 aaKnown RBP26.3■■□□□ 1.8
GSDMD-212ENST00000533063 BCAR3O75815 825 aa26.3■■□□□ 1.8
GSDMD-212ENST00000533063 CT47B1P0C2W7 299 aaPredicted RBP26.3■■□□□ 1.8
GSDMD-212ENST00000533063 RARSP54136 660 aaKnown RBP26.3■■□□□ 1.8
GSDMD-212ENST00000533063 TSPYL6Q8N831 410 aa26.29■■□□□ 1.8
GSDMD-212ENST00000533063 C8orf37Q96NL8 207 aa26.29■■□□□ 1.8
GSDMD-212ENST00000533063 KDM3BQ7LBC6 1761 aa26.29■■□□□ 1.8
GSDMD-212ENST00000533063 NEFLP07196 543 aa26.28■■□□□ 1.8
GSDMD-212ENST00000533063 IFNL2Q8IZJ0 200 aa26.28■■□□□ 1.8
GSDMD-212ENST00000533063 C8orf58Q8NAV2 365 aa26.28■■□□□ 1.8
GSDMD-212ENST00000533063 ZCRB1Q8TBF4 217 aaKnown RBP26.28■■□□□ 1.8
GSDMD-212ENST00000533063 SPATA31A1Q5TZJ5 1347 aa26.27■■□□□ 1.8
GSDMD-212ENST00000533063 PLIN1O60240 522 aa26.27■■□□□ 1.8
GSDMD-212ENST00000533063 TAF7Q15545 349 aaPredicted RBP26.27■■□□□ 1.8
GSDMD-212ENST00000533063 FNBP4Q8N3X1 1017 aaPredicted RBP26.26■■□□□ 1.79
GSDMD-212ENST00000533063 TSPYL4Q9UJ04 414 aa26.26■■□□□ 1.79
GSDMD-212ENST00000533063 KRT24Q2M2I5 525 aa26.25■■□□□ 1.79
GSDMD-212ENST00000533063 VAMP4O75379 141 aa26.25■■□□□ 1.79
GSDMD-212ENST00000533063 NGLY1Q96IV0 654 aa26.25■■□□□ 1.79
GSDMD-212ENST00000533063 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.25■■□□□ 1.79
GSDMD-212ENST00000533063 SPATA31A5Q5VU36 1347 aa26.25■■□□□ 1.79
GSDMD-212ENST00000533063 SPATA31A7Q8IWB4 1347 aa26.25■■□□□ 1.79
GSDMD-212ENST00000533063 PCDH11XQ9BZA7 1347 aa26.25■■□□□ 1.79
GSDMD-212ENST00000533063 PCDH11YQ9BZA8 1340 aa26.25■■□□□ 1.79
GSDMD-212ENST00000533063 UNC5CLQ8IV45 518 aa26.24■■□□□ 1.79
GSDMD-212ENST00000533063 BABAM1Q9NWV8 329 aa26.23■■□□□ 1.79
GSDMD-212ENST00000533063 MRC1P22897 1456 aa26.23■■□□□ 1.79
GSDMD-212ENST00000533063 ELL2O00472 640 aaPredicted RBP26.22■■□□□ 1.79
GSDMD-212ENST00000533063 BCL2L13Q9BXK5 485 aa26.22■■□□□ 1.79
GSDMD-212ENST00000533063 TEFQ10587 303 aa26.21■■□□□ 1.79
GSDMD-212ENST00000533063 TWISTNBQ3B726 338 aaPredicted RBP26.21■■□□□ 1.79
GSDMD-212ENST00000533063 SSH1Q8WYL5 1049 aa26.21■■□□□ 1.79
GSDMD-212ENST00000533063 DCAF5Q96JK2 942 aa26.21■■□□□ 1.79
GSDMD-212ENST00000533063 THRAP3Q9Y2W1 955 aaKnown RBP26.2■■□□□ 1.78
GSDMD-212ENST00000533063 TOGARAM1Q9Y4F4 1720 aa26.2■■□□□ 1.78
GSDMD-212ENST00000533063 NKX1-1Q15270 411 aaPredicted RBP26.19■■□□□ 1.78
GSDMD-212ENST00000533063 HSP90AB1P08238 724 aaKnown RBP26.18■■□□□ 1.78
GSDMD-212ENST00000533063 VPS72Q15906 364 aa26.18■■□□□ 1.78
GSDMD-212ENST00000533063 C20orf194Q5TEA3 1177 aa26.18■■□□□ 1.78
GSDMD-212ENST00000533063 DDX54Q8TDD1 881 aaKnown RBP26.17■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms