RNA–Protein interactions for RNA: ENST00000532844.5

CTNND1-234, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-234ENST00000532844 NFE2L2Q16236 605 aa9.59□□□□□ -0.87
CTNND1-234ENST00000532844 AACSQ86V21 672 aa9.59□□□□□ -0.87
CTNND1-234ENST00000532844 CCDC192P0DO97 292 aa9.58□□□□□ -0.88
CTNND1-234ENST00000532844 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.58□□□□□ -0.881e-7■■■□□ 16.3
CTNND1-234ENST00000532844 TNMDQ9H2S6 317 aa9.58□□□□□ -0.88
CTNND1-234ENST00000532844 RRP9O43818 475 aaKnown RBP9.58□□□□□ -0.88
CTNND1-234ENST00000532844 NF2P35240 595 aa9.58□□□□□ -0.88
CTNND1-234ENST00000532844 PROSER2Q86WR7 435 aaPredicted RBP9.58□□□□□ -0.88
CTNND1-234ENST00000532844 KIF14Q15058 1648 aa9.58□□□□□ -0.88
CTNND1-234ENST00000532844 MAP3K9P80192 1104 aa9.58□□□□□ -0.88
CTNND1-234ENST00000532844 DHX37Q8IY37 1157 aaKnown RBP9.58□□□□□ -0.88
CTNND1-234ENST00000532844 STRN4Q9NRL3 753 aa9.58□□□□□ -0.88
CTNND1-234ENST00000532844 PDRG1Q9NUG6 133 aa9.58□□□□□ -0.88
CTNND1-234ENST00000532844 BCCIPQ9P287 314 aaKnown RBP eCLIP9.58□□□□□ -0.881e-6■■■■□ 21.2
CTNND1-234ENST00000532844 SRGAP3O43295 1099 aa9.58□□□□□ -0.88
CTNND1-234ENST00000532844 CWC27Q6UX04 472 aaKnown RBP9.58□□□□□ -0.88
CTNND1-234ENST00000532844 TMEM87AQ8NBN3 555 aa9.58□□□□□ -0.88
CTNND1-234ENST00000532844 ABCC5O15440 1437 aa9.58□□□□□ -0.88
CTNND1-234ENST00000532844 ERLIN1O75477 346 aa9.57□□□□□ -0.88
CTNND1-234ENST00000532844 C20orf194Q5TEA3 1177 aa9.57□□□□□ -0.88
CTNND1-234ENST00000532844 NKTRP30414 1462 aaKnown RBP9.57□□□□□ -0.88
CTNND1-234ENST00000532844 BTBD11A6QL63 1104 aa9.57□□□□□ -0.88
CTNND1-234ENST00000532844 IKQ13123 557 aaPredicted RBP9.57□□□□□ -0.88
CTNND1-234ENST00000532844 MAGI1Q96QZ7 1491 aaPredicted RBP9.57□□□□□ -0.88
CTNND1-234ENST00000532844 KIAA0586Q9BVV6 1533 aa9.57□□□□□ -0.88
CTNND1-234ENST00000532844 SLC3A2P08195 630 aaKnown RBP9.57□□□□□ -0.88
CTNND1-234ENST00000532844 MCM4P33991 863 aa9.57□□□□□ -0.88
CTNND1-234ENST00000532844 FILIP1LQ4L180 1135 aa9.57□□□□□ -0.88
CTNND1-234ENST00000532844 LARP1BQ659C4 914 aaKnown RBP9.57□□□□□ -0.88
CTNND1-234ENST00000532844 IL1RAPL2Q9NP60 686 aa9.57□□□□□ -0.88
CTNND1-234ENST00000532844 ABCA10Q8WWZ4 1543 aa9.57□□□□□ -0.88
CTNND1-234ENST00000532844 BRPF1P55201 1214 aaPredicted RBP9.57□□□□□ -0.88
CTNND1-234ENST00000532844 SMARCE1Q969G3 411 aa9.57□□□□□ -0.88
CTNND1-234ENST00000532844 SPG7Q9UQ90 795 aa9.57□□□□□ -0.88
CTNND1-234ENST00000532844 KRT85P78386 507 aa9.57□□□□□ -0.88
CTNND1-234ENST00000532844 JAKMIP1Q96N16 626 aaKnown RBP9.57□□□□□ -0.88
CTNND1-234ENST00000532844 RAPGEF3O95398 923 aa9.56□□□□□ -0.88
CTNND1-234ENST00000532844 SKAP1Q86WV1 359 aa9.56□□□□□ -0.88
CTNND1-234ENST00000532844 RPAP2Q8IXW5 612 aaPredicted RBP9.56□□□□□ -0.88
CTNND1-234ENST00000532844 MAGEC2Q9UBF1 373 aaPredicted RBP9.56□□□□□ -0.88
CTNND1-234ENST00000532844 CIZ1Q9ULV3 898 aaPredicted RBP9.56□□□□□ -0.88
CTNND1-234ENST00000532844 FAM135AQ9P2D6 1515 aa9.56□□□□□ -0.88
CTNND1-234ENST00000532844 ME1P48163 572 aa9.56□□□□□ -0.88
CTNND1-234ENST00000532844 MPNDQ8N594 471 aa9.56□□□□□ -0.88
CTNND1-234ENST00000532844 TXLNAP40222 546 aa9.56□□□□□ -0.88
CTNND1-234ENST00000532844 NUTM1Q86Y26 1132 aa9.56□□□□□ -0.88
CTNND1-234ENST00000532844 SERPINC1P01008 464 aa9.55□□□□□ -0.88
CTNND1-234ENST00000532844 PIP4K2BP78356 416 aa9.55□□□□□ -0.88
CTNND1-234ENST00000532844 THEMISQ8N1K5 641 aaPredicted RBP9.55□□□□□ -0.88
CTNND1-234ENST00000532844 CCDC97Q96F63 343 aaPredicted RBP9.55□□□□□ -0.88
CTNND1-234ENST00000532844 CDK5RAP3Q96JB5 506 aa9.55□□□□□ -0.88
CTNND1-234ENST00000532844 THUMPD2Q9BTF0 503 aaKnown RBP9.55□□□□□ -0.88
CTNND1-234ENST00000532844 WDR70Q9NW82 654 aa9.55□□□□□ -0.88
CTNND1-234ENST00000532844 CCDC69A6NI79 296 aa9.55□□□□□ -0.88
CTNND1-234ENST00000532844 BLOC1S2Q6QNY1 142 aa9.55□□□□□ -0.88
CTNND1-234ENST00000532844 JMYQ8N9B5 988 aa9.55□□□□□ -0.88
CTNND1-234ENST00000532844 MIS18AQ9NYP9 233 aa9.55□□□□□ -0.88
CTNND1-234ENST00000532844 NUTM2BA6NNL0 878 aaPredicted RBP9.55□□□□□ -0.88
CTNND1-234ENST00000532844 NUTM2EB1AL46 878 aaPredicted RBP9.55□□□□□ -0.88
CTNND1-234ENST00000532844 RARSP54136 660 aaKnown RBP9.55□□□□□ -0.88
CTNND1-234ENST00000532844 NUTM2AQ8IVF1 878 aaPredicted RBP9.55□□□□□ -0.88
CTNND1-234ENST00000532844 TAX1BP1Q86VP1 789 aa9.55□□□□□ -0.88
CTNND1-234ENST00000532844 SPATA32Q96LK8 384 aa9.55□□□□□ -0.88
CTNND1-234ENST00000532844 ZSCAN31Q96LW9 406 aaPredicted RBP9.55□□□□□ -0.88
CTNND1-234ENST00000532844 GNAT3A8MTJ3 354 aa9.55□□□□□ -0.88
CTNND1-234ENST00000532844 TICAM2Q86XR7 235 aa9.55□□□□□ -0.88
CTNND1-234ENST00000532844 GNL3LQ9NVN8 582 aaKnown RBP9.55□□□□□ -0.88
CTNND1-234ENST00000532844 MAP3K1Q13233 1512 aa9.55□□□□□ -0.88
CTNND1-234ENST00000532844 SMARCA5O60264 1052 aaPredicted RBP9.54□□□□□ -0.88
CTNND1-234ENST00000532844 FKBP4Q02790 459 aaKnown RBP eCLIP9.54□□□□□ -0.88
CTNND1-234ENST00000532844 DDX54Q8TDD1 881 aaKnown RBP9.54□□□□□ -0.88
CTNND1-234ENST00000532844 NUDT16Q96DE0 195 aaKnown RBP9.54□□□□□ -0.88
CTNND1-234ENST00000532844 TOM1L2Q6ZVM7 507 aa9.54□□□□□ -0.88
CTNND1-234ENST00000532844 MCM10Q7L590 875 aa9.54□□□□□ -0.88
CTNND1-234ENST00000532844 SLC26A8Q96RN1 970 aa9.54□□□□□ -0.88
CTNND1-234ENST00000532844 NCOA1Q15788 1441 aa9.54□□□□□ -0.88
CTNND1-234ENST00000532844 CCDC57Q2TAC2 916 aa9.54□□□□□ -0.88
CTNND1-234ENST00000532844 SPATA24Q86W54 205 aa9.54□□□□□ -0.88
CTNND1-234ENST00000532844 EXOC6BQ9Y2D4 811 aa9.54□□□□□ -0.88
CTNND1-234ENST00000532844 TRIM22Q8IYM9 498 aa9.54□□□□□ -0.88
CTNND1-234ENST00000532844 GPATCH11Q8N954 259 aa9.54□□□□□ -0.88
CTNND1-234ENST00000532844 NACAP1Q9BZK3 213 aa9.54□□□□□ -0.88
CTNND1-234ENST00000532844 ERICH4A6NGS2 130 aa9.53□□□□□ -0.88
CTNND1-234ENST00000532844 CASTP20810 708 aaKnown RBP9.53□□□□□ -0.88
CTNND1-234ENST00000532844 DHX8Q14562 1220 aaKnown RBP9.53□□□□□ -0.88
CTNND1-234ENST00000532844 DUSP27Q5VZP5 1158 aa9.53□□□□□ -0.88
CTNND1-234ENST00000532844 ZSCAN25Q6NSZ9 544 aa9.53□□□□□ -0.88
CTNND1-234ENST00000532844 CCDC112Q8NEF3 446 aa9.53□□□□□ -0.88
CTNND1-234ENST00000532844 SEPT11Q9NVA2 429 aaKnown RBP9.53□□□□□ -0.88
CTNND1-234ENST00000532844 ALDH1L2Q3SY69 923 aa9.53□□□□□ -0.88
CTNND1-234ENST00000532844 NUP133Q8WUM0 1156 aa9.53□□□□□ -0.88
CTNND1-234ENST00000532844 SSH1Q8WYL5 1049 aa9.53□□□□□ -0.88
CTNND1-234ENST00000532844 PIP4K2AP48426 406 aaPredicted RBP9.53□□□□□ -0.88
CTNND1-234ENST00000532844 DACH1Q9UI36 760 aa9.53□□□□□ -0.88
CTNND1-234ENST00000532844 HMGB2P26583 209 aaKnown RBP9.52□□□□□ -0.88
CTNND1-234ENST00000532844 IPO4Q8TEX9 1081 aaKnown RBP9.52□□□□□ -0.88
CTNND1-234ENST00000532844 NUP62CLQ9H1M0 184 aa9.52□□□□□ -0.88
CTNND1-234ENST00000532844 PLB1Q6P1J6 1458 aa9.52□□□□□ -0.88
CTNND1-234ENST00000532844 MX1P20591 662 aa9.52□□□□□ -0.89
CTNND1-234ENST00000532844 PPP6R1Q9UPN7 881 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms