RNA–Protein interactions for RNA: ENST00000532029.6

LRRK1-208, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best) BASIC

Gene LRRK1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-208ENST00000532029 HMOX1P09601 288 aa29.8■■■□□ 2.36
LRRK1-208ENST00000532029 ZCRB1Q8TBF4 217 aaKnown RBP29.8■■■□□ 2.36
LRRK1-208ENST00000532029 KDRP35968 1356 aa29.79■■■□□ 2.36
LRRK1-208ENST00000532029 UPF1Q92900 1129 aaKnown RBP eCLIP29.79■■■□□ 2.36
LRRK1-208ENST00000532029 U2AF1L5P0DN76 240 aaPredicted RBP29.78■■■□□ 2.36
LRRK1-208ENST00000532029 U2AF1Q01081 240 aaKnown RBP eCLIP29.78■■■□□ 2.36
LRRK1-208ENST00000532029 DIEXFQ68CQ4 756 aaKnown RBP29.76■■■□□ 2.35
LRRK1-208ENST00000532029 DDX54Q8TDD1 881 aaKnown RBP29.75■■■□□ 2.35
LRRK1-208ENST00000532029 SPG7Q9UQ90 795 aa29.75■■■□□ 2.35
LRRK1-208ENST00000532029 PLEKHG2Q9H7P9 1386 aa29.75■■■□□ 2.35
LRRK1-208ENST00000532029 PLEKHO1Q53GL0 409 aaPredicted RBP29.73■■■□□ 2.35
LRRK1-208ENST00000532029 FAM182BQ5T319 152 aa29.73■■■□□ 2.35
LRRK1-208ENST00000532029 MARCH10Q8NA82 808 aaPredicted RBP29.73■■■□□ 2.35
LRRK1-208ENST00000532029 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.73■■■□□ 2.35
LRRK1-208ENST00000532029 PCDH11XQ9BZA7 1347 aa29.71■■■□□ 2.35
LRRK1-208ENST00000532029 PCDH11YQ9BZA8 1340 aa29.71■■■□□ 2.35
LRRK1-208ENST00000532029 PKD1L3Q7Z443 1732 aa29.71■■■□□ 2.35
LRRK1-208ENST00000532029 AMOTQ4VCS5 1084 aa29.7■■■□□ 2.35
LRRK1-208ENST00000532029 FAM196AQ6ZSG2 479 aa29.7■■■□□ 2.35
LRRK1-208ENST00000532029 WDR43Q15061 677 aaKnown RBP eCLIP29.69■■■□□ 2.34
LRRK1-208ENST00000532029 FCHSD2O94868 740 aa29.68■■■□□ 2.34
LRRK1-208ENST00000532029 PRKAR2BP31323 418 aa29.67■■■□□ 2.34
LRRK1-208ENST00000532029 RSPH6AQ9H0K4 717 aa29.67■■■□□ 2.34
LRRK1-208ENST00000532029 MRS2Q9HD23 443 aa29.67■■■□□ 2.34
LRRK1-208ENST00000532029 SHANK3Q9BYB0 1731 aa29.67■■■□□ 2.34
LRRK1-208ENST00000532029 CCDC184Q52MB2 194 aa29.64■■■□□ 2.34
LRRK1-208ENST00000532029 ZNF530Q6P9A1 599 aaPredicted RBP29.64■■■□□ 2.34
LRRK1-208ENST00000532029 PNNQ9H307 717 aaKnown RBP29.64■■■□□ 2.34
LRRK1-208ENST00000532029 CYP27B1O15528 508 aa29.63■■■□□ 2.33
LRRK1-208ENST00000532029 NEFMP07197 916 aa29.63■■■□□ 2.33
LRRK1-208ENST00000532029 IFNL2Q8IZJ0 200 aa29.63■■■□□ 2.33
LRRK1-208ENST00000532029 BCL9O00512 1426 aa29.62■■■□□ 2.33
LRRK1-208ENST00000532029 PHKG2P15735 406 aa29.61■■■□□ 2.33
LRRK1-208ENST00000532029 C1orf141Q5JVX7 400 aa29.61■■■□□ 2.33
LRRK1-208ENST00000532029 MTHFSDQ2M296 383 aaKnown RBP29.58■■■□□ 2.33
LRRK1-208ENST00000532029 GAS2L2Q8NHY3 880 aa29.58■■■□□ 2.33
LRRK1-208ENST00000532029 MAPK8IP3Q9UPT6 1336 aa29.57■■■□□ 2.32
LRRK1-208ENST00000532029 HSP90AB1P08238 724 aaKnown RBP29.57■■■□□ 2.32
LRRK1-208ENST00000532029 PHACTR3Q96KR7 559 aa29.57■■■□□ 2.32
LRRK1-208ENST00000532029 ADAMTS8Q9UP79 889 aa29.57■■■□□ 2.32
LRRK1-208ENST00000532029 TRIM37O94972 964 aa29.56■■■□□ 2.32
LRRK1-208ENST00000532029 ACSBG1Q96GR2 724 aa29.56■■■□□ 2.32
LRRK1-208ENST00000532029 SF3B2Q13435 895 aaKnown RBP29.55■■■□□ 2.32
LRRK1-208ENST00000532029 NKX1-1Q15270 411 aaPredicted RBP29.55■■■□□ 2.32
LRRK1-208ENST00000532029 AKAP4Q5JQC9 854 aa29.55■■■□□ 2.32
LRRK1-208ENST00000532029 CCDC125Q86Z20 511 aa29.54■■■□□ 2.32
LRRK1-208ENST00000532029 PLEKHF1Q96S99 279 aa29.53■■■□□ 2.32
LRRK1-208ENST00000532029 PNISRQ8TF01 805 aaKnown RBP29.52■■■□□ 2.32
LRRK1-208ENST00000532029 CCER2I3L3R5 266 aa29.51■■■□□ 2.31
LRRK1-208ENST00000532029 SYTL4Q96C24 671 aaPredicted RBP29.51■■■□□ 2.31
LRRK1-208ENST00000532029 DCAF5Q96JK2 942 aa29.51■■■□□ 2.31
LRRK1-208ENST00000532029 BCL11BQ9C0K0 894 aaPredicted RBP29.51■■■□□ 2.31
LRRK1-208ENST00000532029 DOT1LQ8TEK3 1739 aa29.51■■■□□ 2.31
LRRK1-208ENST00000532029 SBF2Q86WG5 1849 aa29.5■■■□□ 2.31
LRRK1-208ENST00000532029 NHSQ6T4R5 1651 aa29.5■■■□□ 2.31
LRRK1-208ENST00000532029 KCNQ2O43526 872 aa29.49■■■□□ 2.31
LRRK1-208ENST00000532029 PRIM1P49642 420 aaKnown RBP29.49■■■□□ 2.31
LRRK1-208ENST00000532029 CCDC146Q8IYE0 955 aa29.49■■■□□ 2.31
LRRK1-208ENST00000532029 MIER1Q8N108 512 aa29.49■■■□□ 2.31
LRRK1-208ENST00000532029 RUNDC1Q96C34 613 aa29.49■■■□□ 2.31
LRRK1-208ENST00000532029 MPRIPQ6WCQ1 1025 aa29.48■■■□□ 2.31
LRRK1-208ENST00000532029 MAP3K5Q99683 1374 aa29.48■■■□□ 2.31
LRRK1-208ENST00000532029 GNAT3A8MTJ3 354 aa29.47■■■□□ 2.31
LRRK1-208ENST00000532029 KDM6AO15550 1401 aaPredicted RBP29.45■■■□□ 2.31
LRRK1-208ENST00000532029 APBA3O96018 575 aa29.45■■■□□ 2.31
LRRK1-208ENST00000532029 NFE2L2Q16236 605 aa29.45■■■□□ 2.31
LRRK1-208ENST00000532029 TNS1Q9HBL0 1735 aaKnown RBP29.45■■■□□ 2.3
LRRK1-208ENST00000532029 TOGARAM1Q9Y4F4 1720 aa29.45■■■□□ 2.3
LRRK1-208ENST00000532029 BAG6P46379 1132 aa29.44■■■□□ 2.3
LRRK1-208ENST00000532029 PTF1AQ7RTS3 328 aa29.44■■■□□ 2.3
LRRK1-208ENST00000532029 ERVV-2B6SEH9 535 aa29.43■■■□□ 2.3
LRRK1-208ENST00000532029 FAM9BQ8IZU0 186 aa29.43■■■□□ 2.3
LRRK1-208ENST00000532029 RNMTO43148 476 aaKnown RBP29.42■■■□□ 2.3
LRRK1-208ENST00000532029 RTF1Q92541 710 aaKnown RBP29.42■■■□□ 2.3
LRRK1-208ENST00000532029 TMOD3Q9NYL9 352 aa29.42■■■□□ 2.3
LRRK1-208ENST00000532029 KAT6BQ8WYB5 2073 aa29.41■■■□□ 2.3
LRRK1-208ENST00000532029 CABP4P57796 275 aa29.41■■■□□ 2.3
LRRK1-208ENST00000532029 LGR6Q9HBX8 967 aa29.4■■■□□ 2.3
LRRK1-208ENST00000532029 HTATSF1O43719 755 aaKnown RBP29.39■■■□□ 2.3
LRRK1-208ENST00000532029 EP400Q96L91 3159 aa29.39■■■□□ 2.29
LRRK1-208ENST00000532029 SCN11AQ9UI33 1791 aa29.38■■■□□ 2.29
LRRK1-208ENST00000532029 BTAF1O14981 1849 aa29.37■■■□□ 2.29
LRRK1-208ENST00000532029 ITGB4P16144 1822 aa29.37■■■□□ 2.29
LRRK1-208ENST00000532029 TMPOP42166 694 aaKnown RBP29.37■■■□□ 2.29
LRRK1-208ENST00000532029 DEFB132Q7Z7B7 95 aa29.37■■■□□ 2.29
LRRK1-208ENST00000532029 PIGBQ92521 554 aa29.37■■■□□ 2.29
LRRK1-208ENST00000532029 RIPK4P57078 832 aa29.36■■■□□ 2.29
LRRK1-208ENST00000532029 IL17REQ8NFR9 667 aa29.36■■■□□ 2.29
LRRK1-208ENST00000532029 RRP7AQ9Y3A4 280 aaKnown RBP29.36■■■□□ 2.29
LRRK1-208ENST00000532029 ADAMTS7Q9UKP4 1686 aa29.36■■■□□ 2.29
LRRK1-208ENST00000532029 EN1Q05925 392 aaPredicted RBP29.35■■■□□ 2.29
LRRK1-208ENST00000532029 TEFQ10587 303 aa29.35■■■□□ 2.29
LRRK1-208ENST00000532029 NEUROD2Q15784 382 aa29.35■■■□□ 2.29
LRRK1-208ENST00000532029 SLC52A2Q9HAB3 445 aa29.35■■■□□ 2.29
LRRK1-208ENST00000532029 APAF1O14727 1248 aa29.34■■■□□ 2.29
LRRK1-208ENST00000532029 PLSCR1O15162 318 aa29.34■■■□□ 2.29
LRRK1-208ENST00000532029 LMOD3Q0VAK6 560 aa29.34■■■□□ 2.29
LRRK1-208ENST00000532029 MCM10Q7L590 875 aa29.34■■■□□ 2.29
LRRK1-208ENST00000532029 NFATC2IPQ8NCF5 419 aa29.34■■■□□ 2.29
LRRK1-208ENST00000532029 DLG5Q8TDM6 1919 aa29.32■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms