RNA–Protein interactions for RNA: ENST00000531608.1

SNX19-210, Transcript of sorting nexin 19, humanhuman

TSL 4

Gene SNX19, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX19-210ENST00000531608 ZCRB1Q8TBF4 217 aaKnown RBP25.21■■□□□ 1.63
SNX19-210ENST00000531608 CCNL1Q9UK58 526 aaPredicted RBP25.21■■□□□ 1.63
SNX19-210ENST00000531608 A0A1W2PP64 1363 aa25.2■■□□□ 1.63
SNX19-210ENST00000531608 COL24A1Q17RW2 1714 aa25.2■■□□□ 1.62
SNX19-210ENST00000531608 YBX3P16989 372 aaKnown RBP eCLIP25.19■■□□□ 1.621e-6■□□□□ 8.7
SNX19-210ENST00000531608 AMPHP49418 695 aa25.18■■□□□ 1.62
SNX19-210ENST00000531608 HOXC9P31274 260 aa25.17■■□□□ 1.62
SNX19-210ENST00000531608 COL23A1Q86Y22 540 aaPredicted RBP25.17■■□□□ 1.62
SNX19-210ENST00000531608 COG3Q96JB2 828 aa25.17■■□□□ 1.62
SNX19-210ENST00000531608 NSD2O96028 1365 aa25.17■■□□□ 1.62
SNX19-210ENST00000531608 MAP3K19Q56UN5 1328 aa25.16■■□□□ 1.62
SNX19-210ENST00000531608 IFFO2Q5TF58 517 aa25.16■■□□□ 1.62
SNX19-210ENST00000531608 PUS7Q96PZ0 661 aaKnown RBP25.16■■□□□ 1.62
SNX19-210ENST00000531608 FAM208AQ9UK61 1670 aaKnown RBP25.15■■□□□ 1.62
SNX19-210ENST00000531608 TUBGCP6Q96RT7 1819 aa25.14■■□□□ 1.62
SNX19-210ENST00000531608 USP47Q96K76 1375 aa25.14■■□□□ 1.61
SNX19-210ENST00000531608 SHANK3Q9BYB0 1731 aa25.14■■□□□ 1.61
SNX19-210ENST00000531608 CEP350Q5VT06 3117 aa25.13■■□□□ 1.61
SNX19-210ENST00000531608 DOT1LQ8TEK3 1739 aa25.13■■□□□ 1.61
SNX19-210ENST00000531608 FBLN1P23142 703 aa25.13■■□□□ 1.61
SNX19-210ENST00000531608 MSL1Q68DK7 614 aa25.13■■□□□ 1.61
SNX19-210ENST00000531608 LY75O60449 1722 aa25.12■■□□□ 1.61
SNX19-210ENST00000531608 MEGF6O75095 1541 aa25.1■■□□□ 1.61
SNX19-210ENST00000531608 HMGB2P26583 209 aaKnown RBP25.08■■□□□ 1.61
SNX19-210ENST00000531608 NBPF6Q5VWK0 638 aa25.08■■□□□ 1.61
SNX19-210ENST00000531608 NBPF4Q96M43 638 aa25.08■■□□□ 1.61
SNX19-210ENST00000531608 CD2APQ9Y5K6 639 aa25.08■■□□□ 1.61
SNX19-210ENST00000531608 CGNL1Q0VF96 1302 aa25.08■■□□□ 1.6
SNX19-210ENST00000531608 ATP10DQ9P241 1426 aa25.07■■□□□ 1.6
SNX19-210ENST00000531608 RAPGEF4Q8WZA2 1011 aa25.07■■□□□ 1.6
SNX19-210ENST00000531608 USHBP1Q8N6Y0 703 aa25.06■■□□□ 1.6
SNX19-210ENST00000531608 FLAD1Q8NFF5 587 aa25.06■■□□□ 1.6
SNX19-210ENST00000531608 GPBP1L1Q9HC44 474 aaPredicted RBP25.05■■□□□ 1.6
SNX19-210ENST00000531608 RRS1Q15050 365 aaKnown RBP25.04■■□□□ 1.6
SNX19-210ENST00000531608 RGPD2P0DJD1 1756 aa25.03■■□□□ 1.6
SNX19-210ENST00000531608 TATP17735 454 aaPredicted RBP25.03■■□□□ 1.6
SNX19-210ENST00000531608 RTL1A6NKG5 1358 aa25.03■■□□□ 1.6
SNX19-210ENST00000531608 MPRIPQ6WCQ1 1025 aa25.01■■□□□ 1.59
SNX19-210ENST00000531608 TESK2Q96S53 571 aa25.01■■□□□ 1.59
SNX19-210ENST00000531608 ST20-MTHFSA0A0A6YYL1 179 aa25■■□□□ 1.59
SNX19-210ENST00000531608 PALLDQ8WX93 1383 aa25■■□□□ 1.59
SNX19-210ENST00000531608 SMG6Q86US8 1419 aaKnown RBP25■■□□□ 1.59
SNX19-210ENST00000531608 SLC24A1O60721 1099 aa24.99■■□□□ 1.59
SNX19-210ENST00000531608 ZNF526Q8TF50 670 aaPredicted RBP24.99■■□□□ 1.59
SNX19-210ENST00000531608 PCDH11XQ9BZA7 1347 aa24.99■■□□□ 1.59
SNX19-210ENST00000531608 PCDH11YQ9BZA8 1340 aa24.99■■□□□ 1.59
SNX19-210ENST00000531608 GGNBP2Q9H3C7 697 aa24.98■■□□□ 1.59
SNX19-210ENST00000531608 TONSLQ96HA7 1378 aa24.97■■□□□ 1.59
SNX19-210ENST00000531608 FYB1O15117 783 aa24.97■■□□□ 1.59
SNX19-210ENST00000531608 AK7Q96M32 723 aa24.97■■□□□ 1.59
SNX19-210ENST00000531608 C5P01031 1676 aa24.97■■□□□ 1.59
SNX19-210ENST00000531608 HSPA6P17066 643 aa24.96■■□□□ 1.59
SNX19-210ENST00000531608 SMARCC1Q92922 1105 aaPredicted RBP24.96■■□□□ 1.59
SNX19-210ENST00000531608 HSP90AB2PQ58FF8 381 aa24.95■■□□□ 1.58
SNX19-210ENST00000531608 ADCY9O60503 1353 aa24.94■■□□□ 1.58
SNX19-210ENST00000531608 CYP27B1O15528 508 aa24.93■■□□□ 1.58
SNX19-210ENST00000531608 PHF14O94880 888 aa24.93■■□□□ 1.58
SNX19-210ENST00000531608 WWC3Q9ULE0 1092 aa24.93■■□□□ 1.58
SNX19-210ENST00000531608 INSRP06213 1382 aa24.93■■□□□ 1.58
SNX19-210ENST00000531608 IGSF1Q8N6C5 1336 aa24.92■■□□□ 1.58
SNX19-210ENST00000531608 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.91■■□□□ 1.58
SNX19-210ENST00000531608 AMIGO3Q86WK7 504 aa24.91■■□□□ 1.58
SNX19-210ENST00000531608 SMIM5Q71RC9 77 aa24.9■■□□□ 1.58
SNX19-210ENST00000531608 TAF1LQ8IZX4 1826 aa24.89■■□□□ 1.58
SNX19-210ENST00000531608 PIGBQ92521 554 aa24.89■■□□□ 1.58
SNX19-210ENST00000531608 FLT4P35916 1363 aa24.89■■□□□ 1.57
SNX19-210ENST00000531608 C4BP0C0L5 1744 aa24.89■■□□□ 1.57
SNX19-210ENST00000531608 NSD3Q9BZ95 1437 aa24.88■■□□□ 1.57
SNX19-210ENST00000531608 SSFA2P28290 1259 aa24.87■■□□□ 1.57
SNX19-210ENST00000531608 KIF24Q5T7B8 1368 aa24.86■■□□□ 1.57
SNX19-210ENST00000531608 TMF1P82094 1093 aa24.85■■□□□ 1.57
SNX19-210ENST00000531608 LOC102724428A0A0B4J2F2 783 aa24.84■■□□□ 1.57
SNX19-210ENST00000531608 SIK1P57059 783 aa24.84■■□□□ 1.57
SNX19-210ENST00000531608 NKX1-1Q15270 411 aaPredicted RBP24.84■■□□□ 1.57
SNX19-210ENST00000531608 SPG7Q9UQ90 795 aa24.84■■□□□ 1.57
SNX19-210ENST00000531608 LINC00116Q8NCU8 138 aa24.83■■□□□ 1.57
SNX19-210ENST00000531608 KIF3CO14782 793 aa24.82■■□□□ 1.56
SNX19-210ENST00000531608 TOGARAM1Q9Y4F4 1720 aa24.81■■□□□ 1.56
SNX19-210ENST00000531608 GNPATO15228 680 aa24.81■■□□□ 1.56
SNX19-210ENST00000531608 TMOD3Q9NYL9 352 aa24.81■■□□□ 1.56
SNX19-210ENST00000531608 EMILIN1Q9Y6C2 1016 aa24.81■■□□□ 1.56
SNX19-210ENST00000531608 ITGB4P16144 1822 aa24.81■■□□□ 1.56
SNX19-210ENST00000531608 UBR3Q6ZT12 1888 aa24.81■■□□□ 1.56
SNX19-210ENST00000531608 PPM1GO15355 546 aaPredicted RBP24.79■■□□□ 1.56
SNX19-210ENST00000531608 ATP6V1AP38606 617 aa24.78■■□□□ 1.56
SNX19-210ENST00000531608 ASAP1Q9ULH1 1129 aa24.78■■□□□ 1.56
SNX19-210ENST00000531608 MMP10P09238 476 aa24.77■■□□□ 1.56
SNX19-210ENST00000531608 ITPK1Q13572 414 aa24.77■■□□□ 1.56
SNX19-210ENST00000531608 CDCA8Q53HL2 280 aa24.77■■□□□ 1.56
SNX19-210ENST00000531608 PKD1L3Q7Z443 1732 aa24.75■■□□□ 1.55
SNX19-210ENST00000531608 APLP1P51693 650 aa24.75■■□□□ 1.55
SNX19-210ENST00000531608 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.75■■□□□ 1.55
SNX19-210ENST00000531608 CARD14Q9BXL6 1004 aa24.74■■□□□ 1.55
SNX19-210ENST00000531608 BCS1LQ9Y276 419 aa24.74■■□□□ 1.55
SNX19-210ENST00000531608 MAP2P11137 1827 aaKnown RBP24.73■■□□□ 1.55
SNX19-210ENST00000531608 KIF20BQ96Q89 1820 aa24.73■■□□□ 1.55
SNX19-210ENST00000531608 NCAPD2Q15021 1401 aa24.73■■□□□ 1.55
SNX19-210ENST00000531608 TGFB2P61812 414 aa24.73■■□□□ 1.55
SNX19-210ENST00000531608 IFNL2Q8IZJ0 200 aa24.73■■□□□ 1.55
SNX19-210ENST00000531608 EYA1Q99502 592 aa24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms