RNA–Protein interactions for RNA: ENST00000531590.1

LRFN4-203, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

TSL 3

Gene LRFN4, Length 274 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-203ENST00000531590 FAM182BQ5T319 152 aa21.86■■□□□ 1.09
LRFN4-203ENST00000531590 PDE3BQ13370 1112 aa21.85■■□□□ 1.09
LRFN4-203ENST00000531590 NUDCQ9Y266 331 aa21.85■■□□□ 1.09
LRFN4-203ENST00000531590 MARCH10Q8NA82 808 aaPredicted RBP21.84■■□□□ 1.09
LRFN4-203ENST00000531590 DIEXFQ68CQ4 756 aaKnown RBP21.83■■□□□ 1.09
LRFN4-203ENST00000531590 ZCRB1Q8TBF4 217 aaKnown RBP21.83■■□□□ 1.09
LRFN4-203ENST00000531590 U2AF1L5P0DN76 240 aaPredicted RBP21.82■■□□□ 1.08
LRFN4-203ENST00000531590 U2AF1Q01081 240 aaKnown RBP eCLIP21.82■■□□□ 1.08
LRFN4-203ENST00000531590 RSPH6AQ9H0K4 717 aa21.81■■□□□ 1.08
LRFN4-203ENST00000531590 EP400Q96L91 3159 aa21.81■■□□□ 1.08
LRFN4-203ENST00000531590 DDX54Q8TDD1 881 aaKnown RBP21.8■■□□□ 1.08
LRFN4-203ENST00000531590 BRWD3Q6RI45 1802 aa21.8■■□□□ 1.08
LRFN4-203ENST00000531590 PLEKHG2Q9H7P9 1386 aa21.78■■□□□ 1.08
LRFN4-203ENST00000531590 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.78■■□□□ 1.08
LRFN4-203ENST00000531590 CYP27B1O15528 508 aa21.77■■□□□ 1.08
LRFN4-203ENST00000531590 PRKAR2BP31323 418 aa21.77■■□□□ 1.08
LRFN4-203ENST00000531590 SPG7Q9UQ90 795 aa21.77■■□□□ 1.08
LRFN4-203ENST00000531590 PCDH11XQ9BZA7 1347 aa21.76■■□□□ 1.07
LRFN4-203ENST00000531590 PCDH11YQ9BZA8 1340 aa21.76■■□□□ 1.07
LRFN4-203ENST00000531590 FCHSD2O94868 740 aa21.75■■□□□ 1.07
LRFN4-203ENST00000531590 PLEKHO1Q53GL0 409 aaPredicted RBP21.75■■□□□ 1.07
LRFN4-203ENST00000531590 FAM196AQ6ZSG2 479 aa21.75■■□□□ 1.07
LRFN4-203ENST00000531590 MRS2Q9HD23 443 aa21.75■■□□□ 1.07
LRFN4-203ENST00000531590 AMOTQ4VCS5 1084 aa21.74■■□□□ 1.07
LRFN4-203ENST00000531590 PKD1L3Q7Z443 1732 aa21.74■■□□□ 1.07
LRFN4-203ENST00000531590 SHANK3Q9BYB0 1731 aa21.74■■□□□ 1.07
LRFN4-203ENST00000531590 BCL9O00512 1426 aa21.73■■□□□ 1.07
LRFN4-203ENST00000531590 PHKG2P15735 406 aa21.73■■□□□ 1.07
LRFN4-203ENST00000531590 MTHFSDQ2M296 383 aaKnown RBP21.73■■□□□ 1.07
LRFN4-203ENST00000531590 PHACTR3Q96KR7 559 aa21.73■■□□□ 1.07
LRFN4-203ENST00000531590 WDR43Q15061 677 aaKnown RBP eCLIP21.72■■□□□ 1.07
LRFN4-203ENST00000531590 ZNF530Q6P9A1 599 aaPredicted RBP21.72■■□□□ 1.07
LRFN4-203ENST00000531590 ADAMTS8Q9UP79 889 aa21.72■■□□□ 1.07
LRFN4-203ENST00000531590 IFNL2Q8IZJ0 200 aa21.71■■□□□ 1.07
LRFN4-203ENST00000531590 PLEKHF1Q96S99 279 aa21.71■■□□□ 1.07
LRFN4-203ENST00000531590 NKX1-1Q15270 411 aaPredicted RBP21.69■■□□□ 1.06
LRFN4-203ENST00000531590 PTF1AQ7RTS3 328 aa21.69■■□□□ 1.06
LRFN4-203ENST00000531590 PNISRQ8TF01 805 aaKnown RBP21.69■■□□□ 1.06
LRFN4-203ENST00000531590 UPF1Q92900 1129 aaKnown RBP eCLIP21.69■■□□□ 1.06
LRFN4-203ENST00000531590 ACSBG1Q96GR2 724 aa21.69■■□□□ 1.06
LRFN4-203ENST00000531590 TRIM37O94972 964 aa21.68■■□□□ 1.06
LRFN4-203ENST00000531590 MIER1Q8N108 512 aa21.68■■□□□ 1.06
LRFN4-203ENST00000531590 KCNQ2O43526 872 aa21.67■■□□□ 1.06
LRFN4-203ENST00000531590 CCDC146Q8IYE0 955 aa21.67■■□□□ 1.06
LRFN4-203ENST00000531590 AKAP4Q5JQC9 854 aa21.66■■□□□ 1.06
LRFN4-203ENST00000531590 C1orf141Q5JVX7 400 aa21.66■■□□□ 1.06
LRFN4-203ENST00000531590 GAS2L2Q8NHY3 880 aa21.66■■□□□ 1.06
LRFN4-203ENST00000531590 KDM6AO15550 1401 aaPredicted RBP21.65■■□□□ 1.06
LRFN4-203ENST00000531590 CCER2I3L3R5 266 aa21.63■■□□□ 1.05
LRFN4-203ENST00000531590 PRIM1P49642 420 aaKnown RBP21.63■■□□□ 1.05
LRFN4-203ENST00000531590 MPRIPQ6WCQ1 1025 aa21.63■■□□□ 1.05
LRFN4-203ENST00000531590 PNNQ9H307 717 aaKnown RBP21.63■■□□□ 1.05
LRFN4-203ENST00000531590 MAPK8IP3Q9UPT6 1336 aa21.62■■□□□ 1.05
LRFN4-203ENST00000531590 HSP90AB1P08238 724 aaKnown RBP21.62■■□□□ 1.05
LRFN4-203ENST00000531590 BCL11BQ9C0K0 894 aaPredicted RBP21.62■■□□□ 1.05
LRFN4-203ENST00000531590 SYTL4Q96C24 671 aaPredicted RBP21.61■■□□□ 1.05
LRFN4-203ENST00000531590 RUNDC1Q96C34 613 aa21.61■■□□□ 1.05
LRFN4-203ENST00000531590 DCAF5Q96JK2 942 aa21.61■■□□□ 1.05
LRFN4-203ENST00000531590 LGR6Q9HBX8 967 aa21.61■■□□□ 1.05
LRFN4-203ENST00000531590 MAP3K5Q99683 1374 aa21.61■■□□□ 1.05
LRFN4-203ENST00000531590 NEFMP07197 916 aa21.6■■□□□ 1.05
LRFN4-203ENST00000531590 TOGARAM1Q9Y4F4 1720 aa21.6■■□□□ 1.05
LRFN4-203ENST00000531590 GNAT3A8MTJ3 354 aa21.59■■□□□ 1.05
LRFN4-203ENST00000531590 NFE2L2Q16236 605 aa21.59■■□□□ 1.05
LRFN4-203ENST00000531590 RNMTO43148 476 aaKnown RBP21.58■■□□□ 1.05
LRFN4-203ENST00000531590 DEFB132Q7Z7B7 95 aa21.58■■□□□ 1.05
LRFN4-203ENST00000531590 CCDC125Q86Z20 511 aa21.58■■□□□ 1.05
LRFN4-203ENST00000531590 FAM9BQ8IZU0 186 aa21.58■■□□□ 1.05
LRFN4-203ENST00000531590 NHSQ6T4R5 1651 aa21.58■■□□□ 1.05
LRFN4-203ENST00000531590 DOT1LQ8TEK3 1739 aa21.58■■□□□ 1.04
LRFN4-203ENST00000531590 APBA3O96018 575 aa21.57■■□□□ 1.04
LRFN4-203ENST00000531590 IL17REQ8NFR9 667 aa21.57■■□□□ 1.04
LRFN4-203ENST00000531590 ERVV-2B6SEH9 535 aa21.56■■□□□ 1.04
LRFN4-203ENST00000531590 TMPOP42166 694 aaKnown RBP21.56■■□□□ 1.04
LRFN4-203ENST00000531590 SF3B2Q13435 895 aaKnown RBP21.56■■□□□ 1.04
LRFN4-203ENST00000531590 PIGBQ92521 554 aa21.56■■□□□ 1.04
LRFN4-203ENST00000531590 RRP7AQ9Y3A4 280 aaKnown RBP21.56■■□□□ 1.04
LRFN4-203ENST00000531590 TNS1Q9HBL0 1735 aaKnown RBP21.55■■□□□ 1.04
LRFN4-203ENST00000531590 DCTN1Q14203 1278 aa21.55■■□□□ 1.04
LRFN4-203ENST00000531590 CEMIPQ8WUJ3 1361 aa21.54■■□□□ 1.04
LRFN4-203ENST00000531590 APAF1O14727 1248 aa21.54■■□□□ 1.04
LRFN4-203ENST00000531590 MCM10Q7L590 875 aa21.54■■□□□ 1.04
LRFN4-203ENST00000531590 TMOD3Q9NYL9 352 aa21.54■■□□□ 1.04
LRFN4-203ENST00000531590 SBF2Q86WG5 1849 aa21.53■■□□□ 1.04
LRFN4-203ENST00000531590 RIPK4P57078 832 aa21.53■■□□□ 1.04
LRFN4-203ENST00000531590 CABP4P57796 275 aa21.53■■□□□ 1.04
LRFN4-203ENST00000531590 EN1Q05925 392 aaPredicted RBP21.53■■□□□ 1.04
LRFN4-203ENST00000531590 SLC52A2Q9HAB3 445 aa21.53■■□□□ 1.04
LRFN4-203ENST00000531590 ADAMTS7Q9UKP4 1686 aa21.53■■□□□ 1.04
LRFN4-203ENST00000531590 MRC1P22897 1456 aa21.52■■□□□ 1.04
LRFN4-203ENST00000531590 SENP3-EIF4A1A0A087X0R7 540 aa21.52■■□□□ 1.04
LRFN4-203ENST00000531590 HTATSF1O43719 755 aaKnown RBP21.52■■□□□ 1.04
LRFN4-203ENST00000531590 BAG6P46379 1132 aa21.52■■□□□ 1.04
LRFN4-203ENST00000531590 NEUROD2Q15784 382 aa21.52■■□□□ 1.04
LRFN4-203ENST00000531590 NFATC2IPQ8NCF5 419 aa21.52■■□□□ 1.04
LRFN4-203ENST00000531590 RTF1Q92541 710 aaKnown RBP21.51■■□□□ 1.03
LRFN4-203ENST00000531590 PLSCR1O15162 318 aa21.5■■□□□ 1.03
LRFN4-203ENST00000531590 EZH2Q15910 746 aaKnown RBP21.5■■□□□ 1.03
LRFN4-203ENST00000531590 CAMKK2Q96RR4 588 aa21.5■■□□□ 1.03
LRFN4-203ENST00000531590 THUMPD2Q9BTF0 503 aaKnown RBP21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms