RNA–Protein interactions for RNA: ENST00000529994.1

SF3B2-208, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 1,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-208ENST00000529994 YBX3P16989 372 aaKnown RBP eCLIP16.1■□□□□ 0.17
SF3B2-208ENST00000529994 LY75O60449 1722 aa16.09■□□□□ 0.17
SF3B2-208ENST00000529994 IP6K1Q92551 441 aa16.09■□□□□ 0.17
SF3B2-208ENST00000529994 EDC4Q6P2E9 1401 aaKnown RBP16.09■□□□□ 0.17
SF3B2-208ENST00000529994 FAM208AQ9UK61 1670 aaKnown RBP16.08■□□□□ 0.17
SF3B2-208ENST00000529994 MSL1Q68DK7 614 aa16.08■□□□□ 0.16
SF3B2-208ENST00000529994 CCNL1Q9UK58 526 aaPredicted RBP16.08■□□□□ 0.16
SF3B2-208ENST00000529994 ANKRD36BQ8N2N9 1353 aa16.08■□□□□ 0.16
SF3B2-208ENST00000529994 FBLN1P23142 703 aa16.07■□□□□ 0.16
SF3B2-208ENST00000529994 A0A1W2PP64 1363 aa16.07■□□□□ 0.16
SF3B2-208ENST00000529994 NSD2O96028 1365 aa16.07■□□□□ 0.16
SF3B2-208ENST00000529994 IFFO2Q5TF58 517 aa16.06■□□□□ 0.16
SF3B2-208ENST00000529994 COL23A1Q86Y22 540 aaPredicted RBP16.06■□□□□ 0.16
SF3B2-208ENST00000529994 CARD11Q9BXL7 1154 aa16.06■□□□□ 0.16
SF3B2-208ENST00000529994 TERF2IPQ9NYB0 399 aa16.06■□□□□ 0.16
SF3B2-208ENST00000529994 ZCRB1Q8TBF4 217 aaKnown RBP16.05■□□□□ 0.16
SF3B2-208ENST00000529994 MAP3K19Q56UN5 1328 aa16.04■□□□□ 0.16
SF3B2-208ENST00000529994 GRIN3BO60391 1043 aa16.04■□□□□ 0.16
SF3B2-208ENST00000529994 AMPHP49418 695 aa16.04■□□□□ 0.16
SF3B2-208ENST00000529994 MEGF6O75095 1541 aa16.04■□□□□ 0.16
SF3B2-208ENST00000529994 HOXC9P31274 260 aa16.03■□□□□ 0.16
SF3B2-208ENST00000529994 ATP10DQ9P241 1426 aa16.02■□□□□ 0.16
SF3B2-208ENST00000529994 USP47Q96K76 1375 aa16.02■□□□□ 0.16
SF3B2-208ENST00000529994 USHBP1Q8N6Y0 703 aa16.02■□□□□ 0.16
SF3B2-208ENST00000529994 TRIM26Q12899 539 aaPredicted RBP16.01■□□□□ 0.15
SF3B2-208ENST00000529994 COG3Q96JB2 828 aa16.01■□□□□ 0.15
SF3B2-208ENST00000529994 C5P01031 1676 aa16.01■□□□□ 0.15
SF3B2-208ENST00000529994 ZNF526Q8TF50 670 aaPredicted RBP16■□□□□ 0.15
SF3B2-208ENST00000529994 WWC3Q9ULE0 1092 aa16■□□□□ 0.15
SF3B2-208ENST00000529994 NBPF6Q5VWK0 638 aa15.99■□□□□ 0.15
SF3B2-208ENST00000529994 NBPF4Q96M43 638 aa15.99■□□□□ 0.15
SF3B2-208ENST00000529994 TAF1LQ8IZX4 1826 aa15.98■□□□□ 0.15
SF3B2-208ENST00000529994 RRS1Q15050 365 aaKnown RBP15.98■□□□□ 0.15
SF3B2-208ENST00000529994 GPBP1L1Q9HC44 474 aaPredicted RBP15.98■□□□□ 0.15
SF3B2-208ENST00000529994 SMIM5Q71RC9 77 aa15.96■□□□□ 0.15
SF3B2-208ENST00000529994 RAPGEF4Q8WZA2 1011 aa15.96■□□□□ 0.15
SF3B2-208ENST00000529994 CD2APQ9Y5K6 639 aa15.96■□□□□ 0.15
SF3B2-208ENST00000529994 MPRIPQ6WCQ1 1025 aa15.95■□□□□ 0.14
SF3B2-208ENST00000529994 TATP17735 454 aaPredicted RBP15.94■□□□□ 0.14
SF3B2-208ENST00000529994 AMIGO3Q86WK7 504 aa15.94■□□□□ 0.14
SF3B2-208ENST00000529994 PUS7Q96PZ0 661 aaKnown RBP15.94■□□□□ 0.14
SF3B2-208ENST00000529994 GGNBP2Q9H3C7 697 aa15.94■□□□□ 0.14
SF3B2-208ENST00000529994 PALLDQ8WX93 1383 aa15.94■□□□□ 0.14
SF3B2-208ENST00000529994 PHF14O94880 888 aa15.93■□□□□ 0.14
SF3B2-208ENST00000529994 ITGB4P16144 1822 aa15.93■□□□□ 0.14
SF3B2-208ENST00000529994 C4BP0C0L5 1744 aa15.93■□□□□ 0.14
SF3B2-208ENST00000529994 RTL1A6NKG5 1358 aa15.92■□□□□ 0.14
SF3B2-208ENST00000529994 ADCY9O60503 1353 aa15.92■□□□□ 0.14
SF3B2-208ENST00000529994 ST20-MTHFSA0A0A6YYL1 179 aa15.92■□□□□ 0.14
SF3B2-208ENST00000529994 HSPA6P17066 643 aa15.92■□□□□ 0.14
SF3B2-208ENST00000529994 FLAD1Q8NFF5 587 aa15.92■□□□□ 0.14
SF3B2-208ENST00000529994 AK7Q96M32 723 aa15.92■□□□□ 0.14
SF3B2-208ENST00000529994 TESK2Q96S53 571 aa15.92■□□□□ 0.14
SF3B2-208ENST00000529994 CGNL1Q0VF96 1302 aa15.92■□□□□ 0.14
SF3B2-208ENST00000529994 IGSF1Q8N6C5 1336 aa15.92■□□□□ 0.14
SF3B2-208ENST00000529994 TOGARAM1Q9Y4F4 1720 aa15.91■□□□□ 0.14
SF3B2-208ENST00000529994 UBR3Q6ZT12 1888 aa15.91■□□□□ 0.14
SF3B2-208ENST00000529994 HSP90AB2PQ58FF8 381 aa15.91■□□□□ 0.14
SF3B2-208ENST00000529994 SMG6Q86US8 1419 aaKnown RBP15.91■□□□□ 0.14
SF3B2-208ENST00000529994 PCDH11XQ9BZA7 1347 aa15.91■□□□□ 0.14
SF3B2-208ENST00000529994 PCDH11YQ9BZA8 1340 aa15.91■□□□□ 0.14
SF3B2-208ENST00000529994 FYB1O15117 783 aa15.9■□□□□ 0.14
SF3B2-208ENST00000529994 CYP27B1O15528 508 aa15.9■□□□□ 0.14
SF3B2-208ENST00000529994 TONSLQ96HA7 1378 aa15.88■□□□□ 0.13
SF3B2-208ENST00000529994 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.88■□□□□ 0.13
SF3B2-208ENST00000529994 PIGBQ92521 554 aa15.87■□□□□ 0.13
SF3B2-208ENST00000529994 SMARCC1Q92922 1105 aaPredicted RBP15.87■□□□□ 0.13
SF3B2-208ENST00000529994 INSRP06213 1382 aa15.87■□□□□ 0.13
SF3B2-208ENST00000529994 KIF20BQ96Q89 1820 aa15.86■□□□□ 0.13
SF3B2-208ENST00000529994 KIF3CO14782 793 aa15.85■□□□□ 0.13
SF3B2-208ENST00000529994 HMGB2P26583 209 aaKnown RBP15.85■□□□□ 0.13
SF3B2-208ENST00000529994 LINC00116Q8NCU8 138 aa15.85■□□□□ 0.13
SF3B2-208ENST00000529994 MAP2P11137 1827 aaKnown RBP15.84■□□□□ 0.13
SF3B2-208ENST00000529994 PKD1L3Q7Z443 1732 aa15.84■□□□□ 0.13
SF3B2-208ENST00000529994 FLT4P35916 1363 aa15.84■□□□□ 0.13
SF3B2-208ENST00000529994 LOC102724428A0A0B4J2F2 783 aa15.83■□□□□ 0.12
SF3B2-208ENST00000529994 SSFA2P28290 1259 aa15.83■□□□□ 0.12
SF3B2-208ENST00000529994 SIK1P57059 783 aa15.83■□□□□ 0.12
SF3B2-208ENST00000529994 N4BP2Q86UW6 1770 aaPredicted RBP15.82■□□□□ 0.12
SF3B2-208ENST00000529994 GNPATO15228 680 aa15.82■□□□□ 0.12
SF3B2-208ENST00000529994 PPM1GO15355 546 aaPredicted RBP15.82■□□□□ 0.12
SF3B2-208ENST00000529994 EMILIN1Q9Y6C2 1016 aa15.82■□□□□ 0.12
SF3B2-208ENST00000529994 NSD3Q9BZ95 1437 aa15.82■□□□□ 0.12
SF3B2-208ENST00000529994 ITPK1Q13572 414 aa15.81■□□□□ 0.12
SF3B2-208ENST00000529994 ASAP1Q9ULH1 1129 aa15.81■□□□□ 0.12
SF3B2-208ENST00000529994 MMP10P09238 476 aa15.8■□□□□ 0.12
SF3B2-208ENST00000529994 ATP6V1AP38606 617 aa15.8■□□□□ 0.12
SF3B2-208ENST00000529994 TMOD3Q9NYL9 352 aa15.8■□□□□ 0.12
SF3B2-208ENST00000529994 SLC24A1O60721 1099 aa15.79■□□□□ 0.12
SF3B2-208ENST00000529994 TMF1P82094 1093 aa15.79■□□□□ 0.12
SF3B2-208ENST00000529994 NKX1-1Q15270 411 aaPredicted RBP15.79■□□□□ 0.12
SF3B2-208ENST00000529994 PCGF6Q9BYE7 350 aa15.79■□□□□ 0.12
SF3B2-208ENST00000529994 SPG7Q9UQ90 795 aa15.79■□□□□ 0.12
SF3B2-208ENST00000529994 BCS1LQ9Y276 419 aa15.79■□□□□ 0.12
SF3B2-208ENST00000529994 PXDNLA1KZ92 1463 aa15.78■□□□□ 0.12
SF3B2-208ENST00000529994 KIF24Q5T7B8 1368 aa15.78■□□□□ 0.12
SF3B2-208ENST00000529994 KIAA1551Q9HCM1 1747 aa15.78■□□□□ 0.12
SF3B2-208ENST00000529994 A0A0G2JLW4 131 aa15.78■□□□□ 0.12
SF3B2-208ENST00000529994 CICQ96RK0 1608 aaPredicted RBP15.78■□□□□ 0.12
SF3B2-208ENST00000529994 KIF13BQ9NQT8 1826 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms