RNA–Protein interactions for RNA: ENST00000528252.5

SOX6-210, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SOX6, Length 2,707 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-210ENST00000528252 PCDHB15Q9Y5E8 787 aa10.47□□□□□ -0.73
SOX6-210ENST00000528252 ZBTB7CA1YPR0 619 aa10.46□□□□□ -0.73
SOX6-210ENST00000528252 C8orf58Q8NAV2 365 aa10.46□□□□□ -0.73
SOX6-210ENST00000528252 ZNF428Q96B54 188 aa10.46□□□□□ -0.73
SOX6-210ENST00000528252 KIF16BQ96L93 1317 aa10.46□□□□□ -0.74
SOX6-210ENST00000528252 IPO8O15397 1037 aaKnown RBP10.46□□□□□ -0.74
SOX6-210ENST00000528252 TWISTNBQ3B726 338 aaPredicted RBP10.46□□□□□ -0.74
SOX6-210ENST00000528252 KDRP35968 1356 aa10.46□□□□□ -0.74
SOX6-210ENST00000528252 PDE4AP27815 886 aa10.45□□□□□ -0.74
SOX6-210ENST00000528252 AAMPQ13685 434 aa10.45□□□□□ -0.74
SOX6-210ENST00000528252 KIF24Q5T7B8 1368 aa10.45□□□□□ -0.74
SOX6-210ENST00000528252 ITPRIPQ8IWB1 547 aa10.45□□□□□ -0.74
SOX6-210ENST00000528252 HOMEZQ8IX15 550 aa10.45□□□□□ -0.74
SOX6-210ENST00000528252 RGS3P49796 1198 aa10.44□□□□□ -0.74
SOX6-210ENST00000528252 RGPD1P0DJD0 1748 aa10.44□□□□□ -0.74
SOX6-210ENST00000528252 DLG5Q8TDM6 1919 aa10.44□□□□□ -0.74
SOX6-210ENST00000528252 NWD1Q149M9 1564 aa10.44□□□□□ -0.74
SOX6-210ENST00000528252 TMEM94Q12767 1356 aa10.44□□□□□ -0.74
SOX6-210ENST00000528252 CHL1O00533 1208 aa10.44□□□□□ -0.74
SOX6-210ENST00000528252 KRT24Q2M2I5 525 aa10.44□□□□□ -0.74
SOX6-210ENST00000528252 KRT28Q7Z3Y7 464 aa10.44□□□□□ -0.74
SOX6-210ENST00000528252 TMEM57Q8N5G2 664 aa10.44□□□□□ -0.74
SOX6-210ENST00000528252 KCNH5Q8NCM2 988 aa10.44□□□□□ -0.74
SOX6-210ENST00000528252 RTF1Q92541 710 aaKnown RBP10.44□□□□□ -0.74
SOX6-210ENST00000528252 IP6K1Q92551 441 aa10.44□□□□□ -0.74
SOX6-210ENST00000528252 ATF3P18847 181 aa10.43□□□□□ -0.74
SOX6-210ENST00000528252 HAP1P54257 671 aaPredicted RBP10.43□□□□□ -0.74
SOX6-210ENST00000528252 NFKBIBQ15653 356 aa10.43□□□□□ -0.74
SOX6-210ENST00000528252 MRPL50Q8N5N7 158 aaKnown RBP10.43□□□□□ -0.74
SOX6-210ENST00000528252 USHBP1Q8N6Y0 703 aa10.43□□□□□ -0.74
SOX6-210ENST00000528252 GCP02774 474 aa10.43□□□□□ -0.74
SOX6-210ENST00000528252 BRPF1P55201 1214 aaPredicted RBP10.43□□□□□ -0.74
SOX6-210ENST00000528252 GAS2L2Q8NHY3 880 aa10.43□□□□□ -0.74
SOX6-210ENST00000528252 BACH2Q9BYV9 841 aa10.43□□□□□ -0.74
SOX6-210ENST00000528252 MIS18AQ9NYP9 233 aa10.43□□□□□ -0.74
SOX6-210ENST00000528252 DDX19BQ9UMR2 479 aa10.43□□□□□ -0.74
SOX6-210ENST00000528252 C1orf167Q5SNV9 1468 aa10.43□□□□□ -0.74
SOX6-210ENST00000528252 MARF1Q9Y4F3 1742 aaKnown RBP10.42□□□□□ -0.74
SOX6-210ENST00000528252 RTL1A6NKG5 1358 aa10.41□□□□□ -0.74
SOX6-210ENST00000528252 NBPF6Q5VWK0 638 aa10.41□□□□□ -0.74
SOX6-210ENST00000528252 DDX17Q92841 729 aaKnown RBP10.41□□□□□ -0.74
SOX6-210ENST00000528252 NBPF4Q96M43 638 aa10.41□□□□□ -0.74
SOX6-210ENST00000528252 CRB1P82279 1406 aa10.41□□□□□ -0.74
SOX6-210ENST00000528252 KDM4FA0A1W2PPD8 638 aa10.41□□□□□ -0.74
SOX6-210ENST00000528252 RWDD1Q9H446 243 aaPredicted RBP10.41□□□□□ -0.74
SOX6-210ENST00000528252 ARHGEF25Q86VW2 580 aa10.4□□□□□ -0.74
SOX6-210ENST00000528252 ARHGAP45Q92619 1136 aa10.4□□□□□ -0.74
SOX6-210ENST00000528252 NFAT5O94916 1531 aa10.4□□□□□ -0.74
SOX6-210ENST00000528252 GNAT3A8MTJ3 354 aa10.4□□□□□ -0.75
SOX6-210ENST00000528252 LRRC59Q96AG4 307 aaKnown RBP10.4□□□□□ -0.75
SOX6-210ENST00000528252 ZBTB40Q9NUA8 1239 aa10.4□□□□□ -0.75
SOX6-210ENST00000528252 TSPYL4Q9UJ04 414 aa10.4□□□□□ -0.75
SOX6-210ENST00000528252 USP54Q70EL1 1684 aa10.4□□□□□ -0.75
SOX6-210ENST00000528252 RRAGDQ9NQL2 400 aaPredicted RBP10.39□□□□□ -0.75
SOX6-210ENST00000528252 CADPS2Q86UW7 1296 aa10.39□□□□□ -0.75
SOX6-210ENST00000528252 HTATSF1O43719 755 aaKnown RBP10.38□□□□□ -0.75
SOX6-210ENST00000528252 SLC4A3P48751 1232 aa10.38□□□□□ -0.75
SOX6-210ENST00000528252 IL17REQ8NFR9 667 aa10.38□□□□□ -0.75
SOX6-210ENST00000528252 MST1RQ04912 1400 aa10.38□□□□□ -0.75
SOX6-210ENST00000528252 KIAA0232Q92628 1395 aa10.38□□□□□ -0.75
SOX6-210ENST00000528252 USP19O94966 1318 aa10.38□□□□□ -0.75
SOX6-210ENST00000528252 ZC3H6P61129 1189 aaKnown RBP10.38□□□□□ -0.75
SOX6-210ENST00000528252 PDZRN3Q9UPQ7 1066 aa10.37□□□□□ -0.75
SOX6-210ENST00000528252 HSP90AA2PQ14568 343 aaPredicted RBP10.37□□□□□ -0.75
SOX6-210ENST00000528252 API5Q9BZZ5 524 aaKnown RBP10.37□□□□□ -0.75
SOX6-210ENST00000528252 AXIN2Q9Y2T1 843 aa10.37□□□□□ -0.75
SOX6-210ENST00000528252 MSH6P52701 1360 aa10.37□□□□□ -0.75
SOX6-210ENST00000528252 MAP3K5Q99683 1374 aa10.37□□□□□ -0.75
SOX6-210ENST00000528252 ZBTB7BO15156 539 aaPredicted RBP10.36□□□□□ -0.75
SOX6-210ENST00000528252 FAM161AQ3B820 660 aa10.36□□□□□ -0.75
SOX6-210ENST00000528252 ANKRD24Q8TF21 1146 aa10.36□□□□□ -0.75
SOX6-210ENST00000528252 ABCC4O15439 1325 aa10.36□□□□□ -0.75
SOX6-210ENST00000528252 HDAC1Q13547 482 aaPredicted RBP10.36□□□□□ -0.75
SOX6-210ENST00000528252 STRCP1A6NGW2 1772 aa10.36□□□□□ -0.75
SOX6-210ENST00000528252 LTN1O94822 1766 aa10.36□□□□□ -0.75
SOX6-210ENST00000528252 NCOA3Q9Y6Q9 1424 aa10.36□□□□□ -0.75
SOX6-210ENST00000528252 A0A0U1RQG5 324 aaPredicted RBP10.35□□□□□ -0.75
SOX6-210ENST00000528252 C8orf34Q49A92 452 aa10.35□□□□□ -0.75
SOX6-210ENST00000528252 DCCP43146 1447 aa10.35□□□□□ -0.75
SOX6-210ENST00000528252 SLC4A2P04920 1241 aa10.35□□□□□ -0.75
SOX6-210ENST00000528252 SLIT3O75094 1523 aa10.35□□□□□ -0.75
SOX6-210ENST00000528252 NPHP3Q7Z494 1330 aa10.35□□□□□ -0.75
SOX6-210ENST00000528252 TAF7Q15545 349 aaPredicted RBP10.35□□□□□ -0.75
SOX6-210ENST00000528252 CABLES1Q8TDN4 633 aa10.35□□□□□ -0.75
SOX6-210ENST00000528252 NAP1L5Q96NT1 182 aaPredicted RBP10.35□□□□□ -0.75
SOX6-210ENST00000528252 C1orf115Q9H7X2 142 aa10.35□□□□□ -0.75
SOX6-210ENST00000528252 LMTK3Q96Q04 1460 aa10.34□□□□□ -0.75
SOX6-210ENST00000528252 CHMP4BQ9H444 224 aaKnown RBP10.34□□□□□ -0.75
SOX6-210ENST00000528252 LGR6Q9HBX8 967 aa10.34□□□□□ -0.75
SOX6-210ENST00000528252 ZNF335Q9H4Z2 1342 aaPredicted RBP10.33□□□□□ -0.76
SOX6-210ENST00000528252 KIF1AQ12756 1690 aa10.33□□□□□ -0.76
SOX6-210ENST00000528252 FRAT2O75474 233 aaPredicted RBP10.33□□□□□ -0.76
SOX6-210ENST00000528252 PLEKHO1Q53GL0 409 aaPredicted RBP10.33□□□□□ -0.76
SOX6-210ENST00000528252 ZNF530Q6P9A1 599 aaPredicted RBP10.33□□□□□ -0.76
SOX6-210ENST00000528252 TRPM3Q9HCF6 1732 aaPredicted RBP10.33□□□□□ -0.76
SOX6-210ENST00000528252 G2E3Q7L622 706 aa10.33□□□□□ -0.76
SOX6-210ENST00000528252 SMC5Q8IY18 1101 aa10.33□□□□□ -0.76
SOX6-210ENST00000528252 RRP9O43818 475 aaKnown RBP10.32□□□□□ -0.76
SOX6-210ENST00000528252 NECTIN2Q92692 538 aa10.32□□□□□ -0.76
SOX6-210ENST00000528252 INTS3Q68E01 1043 aaKnown RBP10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 175.8 ms