RNA–Protein interactions for RNA: ENST00000527442.5

PKP3-205, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-205ENST00000527442 KCNQ4P56696 695 aa29.16■■■□□ 2.26
PKP3-205ENST00000527442 KLHL34Q8N239 644 aa29.16■■■□□ 2.26
PKP3-205ENST00000527442 SLC16A10Q8TF71 515 aa29.16■■■□□ 2.26
PKP3-205ENST00000527442 NSD2O96028 1365 aa29.15■■■□□ 2.26
PKP3-205ENST00000527442 HSPA5P11021 654 aaKnown RBP29.15■■■□□ 2.26
PKP3-205ENST00000527442 GPR162Q16538 588 aa29.15■■■□□ 2.26
PKP3-205ENST00000527442 ANKRD36BQ8N2N9 1353 aa29.14■■■□□ 2.26
PKP3-205ENST00000527442 SENP3-EIF4A1A0A087X0R7 540 aa29.13■■■□□ 2.25
PKP3-205ENST00000527442 MEGF6O75095 1541 aa29.13■■■□□ 2.25
PKP3-205ENST00000527442 POLD1P28340 1107 aa29.12■■■□□ 2.25
PKP3-205ENST00000527442 C1QTNF8P60827 252 aa29.12■■■□□ 2.25
PKP3-205ENST00000527442 SYTL4Q96C24 671 aaPredicted RBP29.12■■■□□ 2.25
PKP3-205ENST00000527442 MAP3K19Q56UN5 1328 aa29.12■■■□□ 2.25
PKP3-205ENST00000527442 PRIM1P49642 420 aaKnown RBP29.11■■■□□ 2.25
PKP3-205ENST00000527442 TFCP2L1Q9NZI6 479 aa29.11■■■□□ 2.25
PKP3-205ENST00000527442 PUS7Q96PZ0 661 aaKnown RBP29.1■■■□□ 2.25
PKP3-205ENST00000527442 HOXC9P31274 260 aa29.09■■■□□ 2.25
PKP3-205ENST00000527442 FBLN1P23142 703 aa29.08■■■□□ 2.25
PKP3-205ENST00000527442 PELP1Q8IZL8 1130 aaKnown RBP29.08■■■□□ 2.25
PKP3-205ENST00000527442 NLGN2Q8NFZ4 835 aa29.08■■■□□ 2.25
PKP3-205ENST00000527442 COG3Q96JB2 828 aa29.06■■■□□ 2.24
PKP3-205ENST00000527442 ST20-MTHFSA0A0A6YYL1 179 aa29.05■■■□□ 2.24
PKP3-205ENST00000527442 AMPHP49418 695 aa29.05■■■□□ 2.24
PKP3-205ENST00000527442 ZCRB1Q8TBF4 217 aaKnown RBP29.05■■■□□ 2.24
PKP3-205ENST00000527442 C5P01031 1676 aa29.05■■■□□ 2.24
PKP3-205ENST00000527442 ZNF316A6NFI3 1004 aaPredicted RBP29.04■■■□□ 2.24
PKP3-205ENST00000527442 TESK2Q96S53 571 aa29.04■■■□□ 2.24
PKP3-205ENST00000527442 GOLGB1Q14789 3259 aaKnown RBP29.04■■■□□ 2.24
PKP3-205ENST00000527442 CCNL1Q9UK58 526 aaPredicted RBP29.03■■■□□ 2.24
PKP3-205ENST00000527442 RTL1A6NKG5 1358 aa29.01■■■□□ 2.24
PKP3-205ENST00000527442 TAF1LQ8IZX4 1826 aa29.01■■■□□ 2.23
PKP3-205ENST00000527442 GIGYF1O75420 1035 aaPredicted RBP28.98■■■□□ 2.23
PKP3-205ENST00000527442 COL23A1Q86Y22 540 aaPredicted RBP28.98■■■□□ 2.23
PKP3-205ENST00000527442 USHBP1Q8N6Y0 703 aa28.98■■■□□ 2.23
PKP3-205ENST00000527442 KIF20BQ96Q89 1820 aa28.97■■■□□ 2.23
PKP3-205ENST00000527442 YBX3P16989 372 aaKnown RBP eCLIP28.97■■■□□ 2.23
PKP3-205ENST00000527442 NBPF6Q5VWK0 638 aa28.97■■■□□ 2.23
PKP3-205ENST00000527442 NBPF4Q96M43 638 aa28.97■■■□□ 2.23
PKP3-205ENST00000527442 MSH5O43196 834 aa28.96■■■□□ 2.23
PKP3-205ENST00000527442 RRS1Q15050 365 aaKnown RBP28.96■■■□□ 2.23
PKP3-205ENST00000527442 TOGARAM1Q9Y4F4 1720 aa28.95■■■□□ 2.23
PKP3-205ENST00000527442 MSL1Q68DK7 614 aa28.94■■■□□ 2.22
PKP3-205ENST00000527442 ITGB4P16144 1822 aa28.93■■■□□ 2.22
PKP3-205ENST00000527442 SLC24A1O60721 1099 aa28.93■■■□□ 2.22
PKP3-205ENST00000527442 SMG6Q86US8 1419 aaKnown RBP28.93■■■□□ 2.22
PKP3-205ENST00000527442 CGNL1Q0VF96 1302 aa28.92■■■□□ 2.22
PKP3-205ENST00000527442 GGNBP2Q9H3C7 697 aa28.91■■■□□ 2.22
PKP3-205ENST00000527442 RAPGEF4Q8WZA2 1011 aa28.9■■■□□ 2.22
PKP3-205ENST00000527442 FYB1O15117 783 aa28.89■■■□□ 2.22
PKP3-205ENST00000527442 C4BP0C0L5 1744 aa28.89■■■□□ 2.21
PKP3-205ENST00000527442 PKD1L3Q7Z443 1732 aa28.89■■■□□ 2.21
PKP3-205ENST00000527442 GRIN3BO60391 1043 aa28.88■■■□□ 2.21
PKP3-205ENST00000527442 PALLDQ8WX93 1383 aa28.88■■■□□ 2.21
PKP3-205ENST00000527442 TATP17735 454 aaPredicted RBP28.87■■■□□ 2.21
PKP3-205ENST00000527442 TMF1P82094 1093 aa28.87■■■□□ 2.21
PKP3-205ENST00000527442 UBR3Q6ZT12 1888 aa28.86■■■□□ 2.21
PKP3-205ENST00000527442 PCDH11XQ9BZA7 1347 aa28.86■■■□□ 2.21
PKP3-205ENST00000527442 PCDH11YQ9BZA8 1340 aa28.86■■■□□ 2.21
PKP3-205ENST00000527442 INSRP06213 1382 aa28.86■■■□□ 2.21
PKP3-205ENST00000527442 HSP90AB2PQ58FF8 381 aa28.85■■■□□ 2.21
PKP3-205ENST00000527442 KIF7Q2M1P5 1343 aa28.85■■■□□ 2.21
PKP3-205ENST00000527442 WASHC2AQ641Q2 1341 aa28.85■■■□□ 2.21
PKP3-205ENST00000527442 ATP10DQ9P241 1426 aa28.85■■■□□ 2.21
PKP3-205ENST00000527442 FLT4P35916 1363 aa28.83■■■□□ 2.21
PKP3-205ENST00000527442 MPRIPQ6WCQ1 1025 aa28.81■■■□□ 2.2
PKP3-205ENST00000527442 MAP2P11137 1827 aaKnown RBP28.8■■■□□ 2.2
PKP3-205ENST00000527442 CYP27B1O15528 508 aa28.8■■■□□ 2.2
PKP3-205ENST00000527442 CD2APQ9Y5K6 639 aa28.8■■■□□ 2.2
PKP3-205ENST00000527442 CDCA8Q53HL2 280 aa28.79■■■□□ 2.2
PKP3-205ENST00000527442 AMIGO3Q86WK7 504 aa28.79■■■□□ 2.2
PKP3-205ENST00000527442 FLAD1Q8NFF5 587 aa28.79■■■□□ 2.2
PKP3-205ENST00000527442 ANKRD26Q9UPS8 1709 aa28.79■■■□□ 2.2
PKP3-205ENST00000527442 CEP350Q5VT06 3117 aa28.79■■■□□ 2.2
PKP3-205ENST00000527442 KIF24Q5T7B8 1368 aa28.78■■■□□ 2.2
PKP3-205ENST00000527442 ADCY9O60503 1353 aa28.76■■■□□ 2.2
PKP3-205ENST00000527442 NCAPD2Q15021 1401 aa28.76■■■□□ 2.19
PKP3-205ENST00000527442 SMIM5Q71RC9 77 aa28.74■■■□□ 2.19
PKP3-205ENST00000527442 AK7Q96M32 723 aa28.74■■■□□ 2.19
PKP3-205ENST00000527442 SMARCC1Q92922 1105 aaPredicted RBP28.73■■■□□ 2.19
PKP3-205ENST00000527442 EMILIN1Q9Y6C2 1016 aa28.73■■■□□ 2.19
PKP3-205ENST00000527442 PHF14O94880 888 aa28.72■■■□□ 2.19
PKP3-205ENST00000527442 HMGB2P26583 209 aaKnown RBP28.72■■■□□ 2.19
PKP3-205ENST00000527442 PIGBQ92521 554 aa28.71■■■□□ 2.19
PKP3-205ENST00000527442 IGSF1Q8N6C5 1336 aa28.69■■■□□ 2.18
PKP3-205ENST00000527442 NSD3Q9BZ95 1437 aa28.69■■■□□ 2.18
PKP3-205ENST00000527442 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.69■■■□□ 2.18
PKP3-205ENST00000527442 GPBP1L1Q9HC44 474 aaPredicted RBP28.69■■■□□ 2.18
PKP3-205ENST00000527442 WWC3Q9ULE0 1092 aa28.69■■■□□ 2.18
PKP3-205ENST00000527442 CARD14Q9BXL6 1004 aa28.68■■■□□ 2.18
PKP3-205ENST00000527442 NKX1-1Q15270 411 aaPredicted RBP28.67■■■□□ 2.18
PKP3-205ENST00000527442 ZNF526Q8TF50 670 aaPredicted RBP28.67■■■□□ 2.18
PKP3-205ENST00000527442 LINC00116Q8NCU8 138 aa28.66■■■□□ 2.18
PKP3-205ENST00000527442 IFFO2Q5TF58 517 aa28.65■■■□□ 2.18
PKP3-205ENST00000527442 KIAA1551Q9HCM1 1747 aa28.65■■■□□ 2.18
PKP3-205ENST00000527442 LOC102724428A0A0B4J2F2 783 aa28.64■■■□□ 2.18
PKP3-205ENST00000527442 SSFA2P28290 1259 aa28.64■■■□□ 2.18
PKP3-205ENST00000527442 SIK1P57059 783 aa28.64■■■□□ 2.18
PKP3-205ENST00000527442 CICQ96RK0 1608 aaPredicted RBP28.64■■■□□ 2.18
PKP3-205ENST00000527442 POLR3GLQ9BT43 218 aa28.63■■■□□ 2.17
PKP3-205ENST00000527442 SPG7Q9UQ90 795 aa28.63■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms