RNA–Protein interactions for RNA: ENST00000526673.1

SOX6-207, Transcript of SRY-box 6, humanhuman

TSL 3

Gene SOX6, Length 534 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-207ENST00000526673 WNK3Q9BYP7 1800 aa12.18□□□□□ -0.46
SOX6-207ENST00000526673 KIF16BQ96L93 1317 aa12.17□□□□□ -0.46
SOX6-207ENST00000526673 MTHFSDQ2M296 383 aaKnown RBP12.17□□□□□ -0.46
SOX6-207ENST00000526673 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.17□□□□□ -0.46
SOX6-207ENST00000526673 SHANK3Q9BYB0 1731 aa12.17□□□□□ -0.46
SOX6-207ENST00000526673 COL5A2P05997 1499 aaPredicted RBP12.16□□□□□ -0.46
SOX6-207ENST00000526673 MS4A1P11836 297 aa12.16□□□□□ -0.46
SOX6-207ENST00000526673 EXOSC9Q06265 439 aaKnown RBP12.16□□□□□ -0.46
SOX6-207ENST00000526673 AMOTQ4VCS5 1084 aa12.16□□□□□ -0.46
SOX6-207ENST00000526673 NBPF6Q5VWK0 638 aa12.16□□□□□ -0.46
SOX6-207ENST00000526673 NBPF4Q96M43 638 aa12.16□□□□□ -0.46
SOX6-207ENST00000526673 PHLPP1O60346 1717 aa12.15□□□□□ -0.46
SOX6-207ENST00000526673 GNAT3A8MTJ3 354 aa12.15□□□□□ -0.46
SOX6-207ENST00000526673 SOX12O15370 315 aa12.15□□□□□ -0.46
SOX6-207ENST00000526673 XPCQ01831 940 aaPredicted RBP12.15□□□□□ -0.46
SOX6-207ENST00000526673 ANKRD24Q8TF21 1146 aa12.15□□□□□ -0.46
SOX6-207ENST00000526673 ARHGAP45Q92619 1136 aa12.15□□□□□ -0.46
SOX6-207ENST00000526673 TSR2Q969E8 191 aaKnown RBP12.15□□□□□ -0.46
SOX6-207ENST00000526673 MBIPQ9NS73 344 aa12.15□□□□□ -0.46
SOX6-207ENST00000526673 NWD2Q9ULI1 1742 aa12.14□□□□□ -0.47
SOX6-207ENST00000526673 BCAR3O75815 825 aa12.14□□□□□ -0.47
SOX6-207ENST00000526673 IRX6P78412 446 aaPredicted RBP12.14□□□□□ -0.47
SOX6-207ENST00000526673 AXIN2Q9Y2T1 843 aa12.14□□□□□ -0.47
SOX6-207ENST00000526673 NRAPQ86VF7 1730 aa12.14□□□□□ -0.47
SOX6-207ENST00000526673 PAPPAQ13219 1627 aa12.13□□□□□ -0.47
SOX6-207ENST00000526673 VAMP4O75379 141 aa12.13□□□□□ -0.47
SOX6-207ENST00000526673 EXOC6Q8TAG9 804 aa12.13□□□□□ -0.47
SOX6-207ENST00000526673 AKAP4Q5JQC9 854 aa12.12□□□□□ -0.47
SOX6-207ENST00000526673 WDR17Q8IZU2 1322 aa12.11□□□□□ -0.47
SOX6-207ENST00000526673 MEGF6O75095 1541 aa12.11□□□□□ -0.47
SOX6-207ENST00000526673 FAM83GA6ND36 823 aa12.11□□□□□ -0.47
SOX6-207ENST00000526673 C20orf194Q5TEA3 1177 aa12.11□□□□□ -0.47
SOX6-207ENST00000526673 SSH1Q8WYL5 1049 aa12.11□□□□□ -0.47
SOX6-207ENST00000526673 RTF1Q92541 710 aaKnown RBP12.11□□□□□ -0.47
SOX6-207ENST00000526673 DDX17Q92841 729 aaKnown RBP12.11□□□□□ -0.47
SOX6-207ENST00000526673 CRBNQ96SW2 442 aa12.11□□□□□ -0.47
SOX6-207ENST00000526673 LRP6O75581 1613 aa12.11□□□□□ -0.47
SOX6-207ENST00000526673 KDM2BQ8NHM5 1336 aa12.11□□□□□ -0.47
SOX6-207ENST00000526673 UBR2Q8IWV8 1755 aa12.1□□□□□ -0.47
SOX6-207ENST00000526673 PLIN1O60240 522 aa12.1□□□□□ -0.47
SOX6-207ENST00000526673 HOXB7P09629 217 aa12.1□□□□□ -0.47
SOX6-207ENST00000526673 PLEKHO1Q53GL0 409 aaPredicted RBP12.1□□□□□ -0.47
SOX6-207ENST00000526673 ZKSCAN2Q63HK3 967 aa12.1□□□□□ -0.47
SOX6-207ENST00000526673 CCDC136Q96JN2 1154 aa12.1□□□□□ -0.47
SOX6-207ENST00000526673 PXDNLA1KZ92 1463 aa12.09□□□□□ -0.47
SOX6-207ENST00000526673 HEG1Q9ULI3 1381 aa12.09□□□□□ -0.47
SOX6-207ENST00000526673 IPO8O15397 1037 aaKnown RBP12.09□□□□□ -0.47
SOX6-207ENST00000526673 TWISTNBQ3B726 338 aaPredicted RBP12.09□□□□□ -0.47
SOX6-207ENST00000526673 ATF7IPQ6VMQ6 1270 aa12.09□□□□□ -0.47
SOX6-207ENST00000526673 IL17REQ8NFR9 667 aa12.09□□□□□ -0.47
SOX6-207ENST00000526673 LRRC59Q96AG4 307 aaKnown RBP12.09□□□□□ -0.47
SOX6-207ENST00000526673 THUMPD2Q9BTF0 503 aaKnown RBP12.09□□□□□ -0.47
SOX6-207ENST00000526673 LAMB4A4D0S4 1761 aa12.09□□□□□ -0.47
SOX6-207ENST00000526673 GLI3P10071 1580 aa12.09□□□□□ -0.47
SOX6-207ENST00000526673 LMOD2Q6P5Q4 547 aa12.08□□□□□ -0.48
SOX6-207ENST00000526673 MCM10Q7L590 875 aa12.08□□□□□ -0.48
SOX6-207ENST00000526673 CHMP4AQ9BY43 222 aa12.08□□□□□ -0.48
SOX6-207ENST00000526673 SMC4Q9NTJ3 1288 aa12.08□□□□□ -0.48
SOX6-207ENST00000526673 RGS12O14924 1447 aa12.08□□□□□ -0.48
SOX6-207ENST00000526673 ABCC4O15439 1325 aa12.08□□□□□ -0.48
SOX6-207ENST00000526673 DISP2A7MBM2 1401 aa12.07□□□□□ -0.48
SOX6-207ENST00000526673 TRIM27P14373 513 aa12.07□□□□□ -0.48
SOX6-207ENST00000526673 ZC3H6P61129 1189 aaKnown RBP12.07□□□□□ -0.48
SOX6-207ENST00000526673 DCTN1Q14203 1278 aa12.07□□□□□ -0.48
SOX6-207ENST00000526673 MVPQ14764 893 aaKnown RBP12.07□□□□□ -0.48
SOX6-207ENST00000526673 TAF7Q15545 349 aaPredicted RBP12.07□□□□□ -0.48
SOX6-207ENST00000526673 B4GALNT3Q6L9W6 998 aa12.07□□□□□ -0.48
SOX6-207ENST00000526673 MRPL50Q8N5N7 158 aaKnown RBP12.07□□□□□ -0.48
SOX6-207ENST00000526673 PTPRCP08575 1304 aa12.07□□□□□ -0.48
SOX6-207ENST00000526673 IBTKQ9P2D0 1353 aaPredicted RBP12.06□□□□□ -0.48
SOX6-207ENST00000526673 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.06□□□□□ -0.48
SOX6-207ENST00000526673 KDM6AO15550 1401 aaPredicted RBP12.06□□□□□ -0.48
SOX6-207ENST00000526673 CENPQQ7L2Z9 268 aaPredicted RBP12.06□□□□□ -0.48
SOX6-207ENST00000526673 DZIP1LQ8IYY4 767 aaKnown RBP12.06□□□□□ -0.48
SOX6-207ENST00000526673 TSPYL6Q8N831 410 aa12.06□□□□□ -0.48
SOX6-207ENST00000526673 C8orf58Q8NAV2 365 aa12.06□□□□□ -0.48
SOX6-207ENST00000526673 CLUAP1Q96AJ1 413 aa12.06□□□□□ -0.48
SOX6-207ENST00000526673 CICQ96RK0 1608 aaPredicted RBP12.05□□□□□ -0.48
SOX6-207ENST00000526673 USHBP1Q8N6Y0 703 aa12.05□□□□□ -0.48
SOX6-207ENST00000526673 LTV1Q96GA3 475 aaPredicted RBP12.05□□□□□ -0.48
SOX6-207ENST00000526673 CARD10Q9BWT7 1032 aa12.05□□□□□ -0.48
SOX6-207ENST00000526673 CHMP4BQ9H444 224 aaKnown RBP12.05□□□□□ -0.48
SOX6-207ENST00000526673 DDX19BQ9UMR2 479 aa12.05□□□□□ -0.48
SOX6-207ENST00000526673 RLBP1P12271 317 aa12.04□□□□□ -0.48
SOX6-207ENST00000526673 CABLES1Q8TDN4 633 aa12.04□□□□□ -0.48
SOX6-207ENST00000526673 RAPGEF4Q8WZA2 1011 aa12.04□□□□□ -0.48
SOX6-207ENST00000526673 PRDM11Q9NQV5 511 aa12.04□□□□□ -0.48
SOX6-207ENST00000526673 TSPYL4Q9UJ04 414 aa12.04□□□□□ -0.48
SOX6-207ENST00000526673 SPG7Q9UQ90 795 aa12.04□□□□□ -0.48
SOX6-207ENST00000526673 C5P01031 1676 aa12.03□□□□□ -0.48
SOX6-207ENST00000526673 TOGARAM1Q9Y4F4 1720 aa12.03□□□□□ -0.48
SOX6-207ENST00000526673 RNMTO43148 476 aaKnown RBP12.03□□□□□ -0.48
SOX6-207ENST00000526673 HSP90AB1P08238 724 aaKnown RBP12.03□□□□□ -0.48
SOX6-207ENST00000526673 TATP17735 454 aaPredicted RBP12.03□□□□□ -0.48
SOX6-207ENST00000526673 CANXP27824 592 aaKnown RBP12.03□□□□□ -0.48
SOX6-207ENST00000526673 ZNF530Q6P9A1 599 aaPredicted RBP12.03□□□□□ -0.48
SOX6-207ENST00000526673 API5Q9BZZ5 524 aaKnown RBP12.03□□□□□ -0.48
SOX6-207ENST00000526673 TOM1O60784 492 aa12.02□□□□□ -0.49
SOX6-207ENST00000526673 PHKG2P15735 406 aa12.02□□□□□ -0.49
SOX6-207ENST00000526673 NKX1-1Q15270 411 aaPredicted RBP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms