RNA–Protein interactions for RNA: ENST00000526262.5

PPFIA1-206, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 1 (best)

Gene PPFIA1, Length 4,537 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-206ENST00000526262 REC8O95072 547 aa10.85□□□□□ -0.67
PPFIA1-206ENST00000526262 CLASRPQ8N2M8 674 aaKnown RBP10.85□□□□□ -0.67
PPFIA1-206ENST00000526262 C8orf58Q8NAV2 365 aa10.85□□□□□ -0.67
PPFIA1-206ENST00000526262 F6X3S4 739 aa10.85□□□□□ -0.67
PPFIA1-206ENST00000526262 PTPRCP08575 1304 aa10.84□□□□□ -0.67
PPFIA1-206ENST00000526262 TOM1O60784 492 aa10.84□□□□□ -0.67
PPFIA1-206ENST00000526262 FLIIQ13045 1269 aa10.84□□□□□ -0.67
PPFIA1-206ENST00000526262 AKAP4Q5JQC9 854 aa10.84□□□□□ -0.67
PPFIA1-206ENST00000526262 DIAPH3Q9NSV4 1193 aa10.84□□□□□ -0.67
PPFIA1-206ENST00000526262 DBF4Q9UBU7 674 aaPredicted RBP10.84□□□□□ -0.67
PPFIA1-206ENST00000526262 TRIM35Q9UPQ4 493 aa10.84□□□□□ -0.67
PPFIA1-206ENST00000526262 KIF6Q6ZMV9 814 aa10.84□□□□□ -0.67
PPFIA1-206ENST00000526262 ARHGAP45Q92619 1136 aa10.84□□□□□ -0.67
PPFIA1-206ENST00000526262 CLTCQ00610 1675 aaKnown RBP10.84□□□□□ -0.67
PPFIA1-206ENST00000526262 NCBP3Q53F19 620 aaKnown RBP10.84□□□□□ -0.67
PPFIA1-206ENST00000526262 TMOD3Q9NYL9 352 aa10.84□□□□□ -0.67
PPFIA1-206ENST00000526262 ERC2O15083 957 aa10.83□□□□□ -0.68
PPFIA1-206ENST00000526262 CHD1LQ86WJ1 897 aa10.83□□□□□ -0.68
PPFIA1-206ENST00000526262 SETBP1Q9Y6X0 1596 aa10.83□□□□□ -0.68
PPFIA1-206ENST00000526262 ARHGEF40Q8TER5 1519 aa10.83□□□□□ -0.68
PPFIA1-206ENST00000526262 VAMP4O75379 141 aa10.83□□□□□ -0.68
PPFIA1-206ENST00000526262 INTS3Q68E01 1043 aaKnown RBP10.83□□□□□ -0.68
PPFIA1-206ENST00000526262 SLAIN2Q9P270 581 aa10.83□□□□□ -0.68
PPFIA1-206ENST00000526262 TMEM94Q12767 1356 aa10.83□□□□□ -0.68
PPFIA1-206ENST00000526262 ST18O60284 1047 aa10.83□□□□□ -0.68
PPFIA1-206ENST00000526262 RUFY2Q8WXA3 655 aa10.83□□□□□ -0.68
PPFIA1-206ENST00000526262 ZMYM4Q5VZL5 1548 aa10.83□□□□□ -0.68
PPFIA1-206ENST00000526262 TSPYL6Q8N831 410 aa10.83□□□□□ -0.68
PPFIA1-206ENST00000526262 AATKQ6ZMQ8 1374 aa10.82□□□□□ -0.68
PPFIA1-206ENST00000526262 VWDEQ8N2E2 1590 aa10.82□□□□□ -0.68
PPFIA1-206ENST00000526262 EXOC5O00471 708 aa10.82□□□□□ -0.68
PPFIA1-206ENST00000526262 DDX17Q92841 729 aaKnown RBP10.82□□□□□ -0.68
PPFIA1-206ENST00000526262 BACH2Q9BYV9 841 aa10.82□□□□□ -0.68
PPFIA1-206ENST00000526262 FRMPD1Q5SYB0 1578 aa10.82□□□□□ -0.68
PPFIA1-206ENST00000526262 SRGAP3O43295 1099 aa10.82□□□□□ -0.68
PPFIA1-206ENST00000526262 SLC4A3P48751 1232 aa10.82□□□□□ -0.68
PPFIA1-206ENST00000526262 FMNL2Q96PY5 1086 aa10.82□□□□□ -0.68
PPFIA1-206ENST00000526262 CDC45O75419 566 aa10.82□□□□□ -0.68
PPFIA1-206ENST00000526262 USP6P35125 1406 aa10.82□□□□□ -0.68
PPFIA1-206ENST00000526262 FRAT2O75474 233 aaPredicted RBP10.81□□□□□ -0.68
PPFIA1-206ENST00000526262 NGLY1Q96IV0 654 aa10.81□□□□□ -0.68
PPFIA1-206ENST00000526262 LRRCC1Q9C099 1032 aa10.81□□□□□ -0.68
PPFIA1-206ENST00000526262 TMX4Q9H1E5 349 aaPredicted RBP10.81□□□□□ -0.68
PPFIA1-206ENST00000526262 STARD3NLO95772 234 aa10.81□□□□□ -0.68
PPFIA1-206ENST00000526262 ZCRB1Q8TBF4 217 aaKnown RBP10.81□□□□□ -0.68
PPFIA1-206ENST00000526262 DNAAF4Q8WXU2 420 aa10.81□□□□□ -0.68
PPFIA1-206ENST00000526262 C22orf23Q9BZE7 217 aa10.81□□□□□ -0.68
PPFIA1-206ENST00000526262 HYPKQ9NX55 129 aa10.81□□□□□ -0.68
PPFIA1-206ENST00000526262 ZC3H13Q5T200 1668 aaKnown RBP10.81□□□□□ -0.68
PPFIA1-206ENST00000526262 MAP3K5Q99683 1374 aa10.81□□□□□ -0.68
PPFIA1-206ENST00000526262 NEXMIFQ5QGS0 1516 aa10.81□□□□□ -0.68
PPFIA1-206ENST00000526262 UBAP1LF5GYI3 381 aa10.81□□□□□ -0.68
PPFIA1-206ENST00000526262 LARP1Q6PKG0 1096 aaKnown RBP10.81□□□□□ -0.68
PPFIA1-206ENST00000526262 ERC1Q8IUD2 1116 aa10.81□□□□□ -0.68
PPFIA1-206ENST00000526262 MRPL50Q8N5N7 158 aaKnown RBP10.81□□□□□ -0.68
PPFIA1-206ENST00000526262 NEUROD6Q96NK8 337 aa10.81□□□□□ -0.68
PPFIA1-206ENST00000526262 ANO2Q9NQ90 1003 aa10.81□□□□□ -0.68
PPFIA1-206ENST00000526262 KRT24Q2M2I5 525 aa10.8□□□□□ -0.68
PPFIA1-206ENST00000526262 TPRNQ4KMQ1 711 aa10.8□□□□□ -0.68
PPFIA1-206ENST00000526262 TAOK2Q9UL54 1235 aa10.8□□□□□ -0.68
PPFIA1-206ENST00000526262 DEPDC5O75140 1603 aa10.8□□□□□ -0.68
PPFIA1-206ENST00000526262 MSH5O43196 834 aa10.8□□□□□ -0.68
PPFIA1-206ENST00000526262 LRRFIP1Q32MZ4 808 aaKnown RBP10.8□□□□□ -0.68
PPFIA1-206ENST00000526262 NBPF6Q5VWK0 638 aa10.79□□□□□ -0.68
PPFIA1-206ENST00000526262 SKAP1Q86WV1 359 aa10.79□□□□□ -0.68
PPFIA1-206ENST00000526262 NBPF4Q96M43 638 aa10.79□□□□□ -0.68
PPFIA1-206ENST00000526262 NOL8Q76FK4 1167 aaKnown RBP10.79□□□□□ -0.68
PPFIA1-206ENST00000526262 LAMC1P11047 1609 aa10.79□□□□□ -0.68
PPFIA1-206ENST00000526262 LMTK3Q96Q04 1460 aa10.79□□□□□ -0.68
PPFIA1-206ENST00000526262 FAM177BA6PVY3 158 aa10.79□□□□□ -0.68
PPFIA1-206ENST00000526262 EXOC6BQ9Y2D4 811 aa10.79□□□□□ -0.68
PPFIA1-206ENST00000526262 PI4KAP2A4QPH2 592 aa10.78□□□□□ -0.68
PPFIA1-206ENST00000526262 IGHDP01880 384 aa10.78□□□□□ -0.68
PPFIA1-206ENST00000526262 ANXA1P04083 346 aa10.78□□□□□ -0.68
PPFIA1-206ENST00000526262 RLBP1P12271 317 aa10.78□□□□□ -0.68
PPFIA1-206ENST00000526262 PI4KAP1Q8N8J0 262 aa10.78□□□□□ -0.68
PPFIA1-206ENST00000526262 TNNQ9UQP3 1299 aa10.78□□□□□ -0.68
PPFIA1-206ENST00000526262 SNRPA1P09661 255 aaKnown RBP10.78□□□□□ -0.68
PPFIA1-206ENST00000526262 PLEKHF1Q96S99 279 aa10.78□□□□□ -0.68
PPFIA1-206ENST00000526262 FOXD4L1Q9NU39 408 aa10.78□□□□□ -0.68
PPFIA1-206ENST00000526262 CHL1O00533 1208 aa10.78□□□□□ -0.68
PPFIA1-206ENST00000526262 ARHGEF10O15013 1369 aa10.78□□□□□ -0.68
PPFIA1-206ENST00000526262 HSP90B1P14625 803 aaKnown RBP10.78□□□□□ -0.68
PPFIA1-206ENST00000526262 SLC39A6Q13433 755 aa10.78□□□□□ -0.68
PPFIA1-206ENST00000526262 PCDHB15Q9Y5E8 787 aa10.78□□□□□ -0.68
PPFIA1-206ENST00000526262 IL2RBP14784 551 aa10.77□□□□□ -0.68
PPFIA1-206ENST00000526262 GBP4Q96PP9 640 aa10.77□□□□□ -0.68
PPFIA1-206ENST00000526262 PIK3C2BO00750 1634 aa10.77□□□□□ -0.68
PPFIA1-206ENST00000526262 SIL1Q9H173 461 aa10.77□□□□□ -0.69
PPFIA1-206ENST00000526262 NRXN1Q9ULB1 1477 aa10.77□□□□□ -0.69
PPFIA1-206ENST00000526262 CNTROBQ8N137 903 aa10.77□□□□□ -0.69
PPFIA1-206ENST00000526262 NFATC2IPQ8NCF5 419 aa10.77□□□□□ -0.69
PPFIA1-206ENST00000526262 RNF123Q5XPI4 1314 aa10.77□□□□□ -0.69
PPFIA1-206ENST00000526262 ZKSCAN1P17029 563 aaPredicted RBP10.77□□□□□ -0.69
PPFIA1-206ENST00000526262 CHPF2Q9P2E5 772 aa10.77□□□□□ -0.69
PPFIA1-206ENST00000526262 MYD88Q99836 296 aa10.76□□□□□ -0.69
PPFIA1-206ENST00000526262 IL1RAPL2Q9NP60 686 aa10.76□□□□□ -0.69
PPFIA1-206ENST00000526262 LRRFIP2Q9Y608 721 aaKnown RBP10.76□□□□□ -0.69
PPFIA1-206ENST00000526262 RNMTO43148 476 aaKnown RBP10.76□□□□□ -0.69
PPFIA1-206ENST00000526262 DCAF5Q96JK2 942 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms