RNA–Protein interactions for RNA: ENST00000524084.5

CCDC25-211, Transcript of coiled-coil domain containing 25, humanhuman

TSL 3

Gene CCDC25, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25-211ENST00000524084 USP47Q96K76 1375 aa18.24■□□□□ 0.51
CCDC25-211ENST00000524084 KAT6BQ8WYB5 2073 aa18.23■□□□□ 0.51
CCDC25-211ENST00000524084 HMGB2P26583 209 aaKnown RBP18.23■□□□□ 0.51
CCDC25-211ENST00000524084 POLD1P28340 1107 aa18.23■□□□□ 0.51
CCDC25-211ENST00000524084 RAPGEF4Q8WZA2 1011 aa18.23■□□□□ 0.51
CCDC25-211ENST00000524084 TFCP2L1Q9NZI6 479 aa18.23■□□□□ 0.51
CCDC25-211ENST00000524084 FBLN1P23142 703 aa18.22■□□□□ 0.51
CCDC25-211ENST00000524084 GGNBP2Q9H3C7 697 aa18.22■□□□□ 0.51
CCDC25-211ENST00000524084 MEGF6O75095 1541 aa18.22■□□□□ 0.51
CCDC25-211ENST00000524084 QSER1Q2KHR3 1735 aa18.21■□□□□ 0.51
CCDC25-211ENST00000524084 KIF24Q5T7B8 1368 aa18.21■□□□□ 0.51
CCDC25-211ENST00000524084 RRS1Q15050 365 aaKnown RBP18.21■□□□□ 0.51
CCDC25-211ENST00000524084 NBPF6Q5VWK0 638 aa18.21■□□□□ 0.51
CCDC25-211ENST00000524084 NBPF4Q96M43 638 aa18.21■□□□□ 0.51
CCDC25-211ENST00000524084 DOT1LQ8TEK3 1739 aa18.2■□□□□ 0.5
CCDC25-211ENST00000524084 PNPLA7Q6ZV29 1317 aa18.2■□□□□ 0.5
CCDC25-211ENST00000524084 NSD2O96028 1365 aa18.19■□□□□ 0.5
CCDC25-211ENST00000524084 INSRP06213 1382 aa18.19■□□□□ 0.5
CCDC25-211ENST00000524084 FLT4P35916 1363 aa18.19■□□□□ 0.5
CCDC25-211ENST00000524084 TATP17735 454 aaPredicted RBP18.19■□□□□ 0.5
CCDC25-211ENST00000524084 TRIM26Q12899 539 aaPredicted RBP18.19■□□□□ 0.5
CCDC25-211ENST00000524084 CCNL1Q9UK58 526 aaPredicted RBP18.19■□□□□ 0.5
CCDC25-211ENST00000524084 ZNF784Q8NCA9 323 aaPredicted RBP18.18■□□□□ 0.5
CCDC25-211ENST00000524084 PCDH11XQ9BZA7 1347 aa18.18■□□□□ 0.5
CCDC25-211ENST00000524084 PCDH11YQ9BZA8 1340 aa18.18■□□□□ 0.5
CCDC25-211ENST00000524084 LY75O60449 1722 aa18.17■□□□□ 0.5
CCDC25-211ENST00000524084 SHANK3Q9BYB0 1731 aa18.17■□□□□ 0.5
CCDC25-211ENST00000524084 GPR162Q16538 588 aa18.16■□□□□ 0.5
CCDC25-211ENST00000524084 USHBP1Q8N6Y0 703 aa18.16■□□□□ 0.5
CCDC25-211ENST00000524084 RGPD2P0DJD1 1756 aa18.15■□□□□ 0.5
CCDC25-211ENST00000524084 KCNQ4P56696 695 aa18.15■□□□□ 0.5
CCDC25-211ENST00000524084 HSP90AB2PQ58FF8 381 aa18.15■□□□□ 0.5
CCDC25-211ENST00000524084 KLHL34Q8N239 644 aa18.14■□□□□ 0.49
CCDC25-211ENST00000524084 TIMELESSQ9UNS1 1208 aa18.14■□□□□ 0.49
CCDC25-211ENST00000524084 COL24A1Q17RW2 1714 aa18.13■□□□□ 0.49
CCDC25-211ENST00000524084 KIF20BQ96Q89 1820 aa18.13■□□□□ 0.49
CCDC25-211ENST00000524084 MSH5O43196 834 aa18.12■□□□□ 0.49
CCDC25-211ENST00000524084 FLAD1Q8NFF5 587 aa18.12■□□□□ 0.49
CCDC25-211ENST00000524084 NSD3Q9BZ95 1437 aa18.11■□□□□ 0.49
CCDC25-211ENST00000524084 CHD4Q14839 1912 aa18.11■□□□□ 0.49
CCDC25-211ENST00000524084 TUBGCP6Q96RT7 1819 aa18.1■□□□□ 0.49
CCDC25-211ENST00000524084 SMARCC1Q92922 1105 aaPredicted RBP18.1■□□□□ 0.49
CCDC25-211ENST00000524084 CARD14Q9BXL6 1004 aa18.1■□□□□ 0.49
CCDC25-211ENST00000524084 GOLGB1Q14789 3259 aaKnown RBP18.1■□□□□ 0.49
CCDC25-211ENST00000524084 PALLDQ8WX93 1383 aa18.09■□□□□ 0.49
CCDC25-211ENST00000524084 COL23A1Q86Y22 540 aaPredicted RBP18.09■□□□□ 0.49
CCDC25-211ENST00000524084 CYP27B1O15528 508 aa18.08■□□□□ 0.48
CCDC25-211ENST00000524084 MPRIPQ6WCQ1 1025 aa18.08■□□□□ 0.48
CCDC25-211ENST00000524084 PELP1Q8IZL8 1130 aaKnown RBP18.08■□□□□ 0.48
CCDC25-211ENST00000524084 SPG7Q9UQ90 795 aa18.08■□□□□ 0.48
CCDC25-211ENST00000524084 EMILIN1Q9Y6C2 1016 aa18.08■□□□□ 0.48
CCDC25-211ENST00000524084 NCAPD2Q15021 1401 aa18.07■□□□□ 0.48
CCDC25-211ENST00000524084 WASHC2AQ641Q2 1341 aa18.06■□□□□ 0.48
CCDC25-211ENST00000524084 CLSPNQ9HAW4 1339 aa18.06■□□□□ 0.48
CCDC25-211ENST00000524084 PPM1GO15355 546 aaPredicted RBP18.06■□□□□ 0.48
CCDC25-211ENST00000524084 GRIN3BO60391 1043 aa18.06■□□□□ 0.48
CCDC25-211ENST00000524084 NLGN2Q8NFZ4 835 aa18.06■□□□□ 0.48
CCDC25-211ENST00000524084 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.06■□□□□ 0.484e-6■■■□□ 14.8
CCDC25-211ENST00000524084 C5P01031 1676 aa18.06■□□□□ 0.48
CCDC25-211ENST00000524084 NKX1-1Q15270 411 aaPredicted RBP18.05■□□□□ 0.48
CCDC25-211ENST00000524084 PKD1L3Q7Z443 1732 aa18.04■□□□□ 0.48
CCDC25-211ENST00000524084 AK7Q96M32 723 aa18.04■□□□□ 0.48
CCDC25-211ENST00000524084 MSL1Q68DK7 614 aa18.03■□□□□ 0.48
CCDC25-211ENST00000524084 CD2APQ9Y5K6 639 aa18.03■□□□□ 0.48
CCDC25-211ENST00000524084 ANKRD26Q9UPS8 1709 aa18.03■□□□□ 0.48
CCDC25-211ENST00000524084 C1QTNF8P60827 252 aa18.02■□□□□ 0.48
CCDC25-211ENST00000524084 PIGBQ92521 554 aa18.02■□□□□ 0.48
CCDC25-211ENST00000524084 PLEKHG2Q9H7P9 1386 aa18.02■□□□□ 0.47
CCDC25-211ENST00000524084 EYA1Q99502 592 aa18.01■□□□□ 0.47
CCDC25-211ENST00000524084 TMOD3Q9NYL9 352 aa18■□□□□ 0.47
CCDC25-211ENST00000524084 POLKQ9UBT6 870 aa18■□□□□ 0.47
CCDC25-211ENST00000524084 C4BP0C0L5 1744 aa18■□□□□ 0.47
CCDC25-211ENST00000524084 TOGARAM1Q9Y4F4 1720 aa18■□□□□ 0.47
CCDC25-211ENST00000524084 GIGYF1O75420 1035 aaPredicted RBP17.99■□□□□ 0.47
CCDC25-211ENST00000524084 IFNL2Q8IZJ0 200 aa17.99■□□□□ 0.47
CCDC25-211ENST00000524084 TAF1LQ8IZX4 1826 aa17.99■□□□□ 0.47
CCDC25-211ENST00000524084 LOC102724428A0A0B4J2F2 783 aa17.98■□□□□ 0.47
CCDC25-211ENST00000524084 YBX3P16989 372 aaKnown RBP eCLIP17.98■□□□□ 0.47
CCDC25-211ENST00000524084 SSFA2P28290 1259 aa17.98■□□□□ 0.47
CCDC25-211ENST00000524084 SIK1P57059 783 aa17.98■□□□□ 0.47
CCDC25-211ENST00000524084 ITGB4P16144 1822 aa17.98■□□□□ 0.47
CCDC25-211ENST00000524084 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.97■□□□□ 0.47
CCDC25-211ENST00000524084 PHKG2P15735 406 aa17.97■□□□□ 0.47
CCDC25-211ENST00000524084 SENP3-EIF4A1A0A087X0R7 540 aa17.96■□□□□ 0.47
CCDC25-211ENST00000524084 PHF14O94880 888 aa17.96■□□□□ 0.47
CCDC25-211ENST00000524084 POLR3GLQ9BT43 218 aa17.96■□□□□ 0.47
CCDC25-211ENST00000524084 EIF4A2Q14240 407 aaKnown RBP17.95■□□□□ 0.46
CCDC25-211ENST00000524084 MAP2P11137 1827 aaKnown RBP17.95■□□□□ 0.46
CCDC25-211ENST00000524084 EIF4G2P78344 907 aaKnown RBP eCLIP17.94■□□□□ 0.46
CCDC25-211ENST00000524084 ASAP1Q9ULH1 1129 aa17.94■□□□□ 0.46
CCDC25-211ENST00000524084 HSP90AB1P08238 724 aaKnown RBP17.93■□□□□ 0.46
CCDC25-211ENST00000524084 ATP6V1AP38606 617 aa17.93■□□□□ 0.46
CCDC25-211ENST00000524084 TNNT2P45379 298 aaPredicted RBP17.93■□□□□ 0.46
CCDC25-211ENST00000524084 LINC00116Q8NCU8 138 aa17.93■□□□□ 0.46
CCDC25-211ENST00000524084 UBR3Q6ZT12 1888 aa17.92■□□□□ 0.46
CCDC25-211ENST00000524084 ERVV-2B6SEH9 535 aa17.92■□□□□ 0.46
CCDC25-211ENST00000524084 GNPATO15228 680 aa17.92■□□□□ 0.46
CCDC25-211ENST00000524084 AMIGO3Q86WK7 504 aa17.92■□□□□ 0.46
CCDC25-211ENST00000524084 PCGF6Q9BYE7 350 aa17.92■□□□□ 0.46
CCDC25-211ENST00000524084 IGSF1Q8N6C5 1336 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms