RNA–Protein interactions for RNA: ENST00000523298.5

CTNNA1-238, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-238ENST00000523298 CYLDQ9NQC7 956 aa8.63□□□□□ -1.03
CTNNA1-238ENST00000523298 TOR4AQ9NXH8 423 aa8.63□□□□□ -1.03
CTNNA1-238ENST00000523298 NOVA2Q9UNW9 492 aaKnown RBP8.63□□□□□ -1.03
CTNNA1-238ENST00000523298 ERVK-9P63128 1117 aa8.62□□□□□ -1.03
CTNNA1-238ENST00000523298 TRAIPQ9BWF2 469 aa8.62□□□□□ -1.03
CTNNA1-238ENST00000523298 NOD1Q9Y239 953 aa8.62□□□□□ -1.03
CTNNA1-238ENST00000523298 ATP5J2-PTCD1G3V325 749 aa8.61□□□□□ -1.03
CTNNA1-238ENST00000523298 LZTS3O60299 673 aaPredicted RBP8.61□□□□□ -1.03
CTNNA1-238ENST00000523298 LGR5O75473 907 aa8.61□□□□□ -1.03
CTNNA1-238ENST00000523298 SMPD1P17405 629 aa8.61□□□□□ -1.03
CTNNA1-238ENST00000523298 DPYDQ12882 1025 aa8.61□□□□□ -1.03
CTNNA1-238ENST00000523298 ELOAQ14241 798 aaKnown RBP8.61□□□□□ -1.03
CTNNA1-238ENST00000523298 CCDC116Q8IYX3 515 aa8.61□□□□□ -1.03
CTNNA1-238ENST00000523298 KDF1Q8NAX2 398 aaPredicted RBP8.61□□□□□ -1.03
CTNNA1-238ENST00000523298 ACIN1Q9UKV3 1341 aaKnown RBP8.6□□□□□ -1.03
CTNNA1-238ENST00000523298 TRIM26Q12899 539 aaPredicted RBP8.6□□□□□ -1.03
CTNNA1-238ENST00000523298 NNTQ13423 1086 aa8.6□□□□□ -1.03
CTNNA1-238ENST00000523298 SNIP1Q8TAD8 396 aaKnown RBP8.6□□□□□ -1.03
CTNNA1-238ENST00000523298 DNAAF2Q9NVR5 837 aaKnown RBP8.6□□□□□ -1.03
CTNNA1-238ENST00000523298 SFI1A8K8P3 1242 aa8.59□□□□□ -1.03
CTNNA1-238ENST00000523298 CBLBQ13191 982 aa8.59□□□□□ -1.03
CTNNA1-238ENST00000523298 NR5A1Q13285 461 aa8.59□□□□□ -1.03
CTNNA1-238ENST00000523298 ANKMY2Q8IV38 441 aa8.59□□□□□ -1.03
CTNNA1-238ENST00000523298 ITPKCQ96DU7 683 aa8.59□□□□□ -1.03
CTNNA1-238ENST00000523298 TMEM229AB2RXF0 380 aa8.58□□□□□ -1.04
CTNNA1-238ENST00000523298 PDIA4P13667 645 aaKnown RBP8.58□□□□□ -1.04
CTNNA1-238ENST00000523298 SCNN1DP51172 638 aa8.58□□□□□ -1.04
CTNNA1-238ENST00000523298 CCDC102BQ68D86 513 aa8.58□□□□□ -1.04
CTNNA1-238ENST00000523298 CC2D2BQ6DHV5 1058 aa8.58□□□□□ -1.04
CTNNA1-238ENST00000523298 SIX5Q8N196 739 aa8.58□□□□□ -1.04
CTNNA1-238ENST00000523298 TPCN2Q8NHX9 752 aa8.58□□□□□ -1.04
CTNNA1-238ENST00000523298 GAS2L2Q8NHY3 880 aa8.58□□□□□ -1.04
CTNNA1-238ENST00000523298 ZFAND3Q9H8U3 227 aa8.58□□□□□ -1.04
CTNNA1-238ENST00000523298 CSB-PGBD3P0DP91 1061 aa8.57□□□□□ -1.04
CTNNA1-238ENST00000523298 USP4Q13107 963 aa8.57□□□□□ -1.04
CTNNA1-238ENST00000523298 PHLDB3Q6NSJ2 640 aa8.57□□□□□ -1.04
CTNNA1-238ENST00000523298 LARP1Q6PKG0 1096 aaKnown RBP8.57□□□□□ -1.04
CTNNA1-238ENST00000523298 HPS1Q92902 700 aa8.57□□□□□ -1.04
CTNNA1-238ENST00000523298 TIMP2P16035 220 aa8.56□□□□□ -1.04
CTNNA1-238ENST00000523298 SCNN1AP37088 669 aa8.56□□□□□ -1.04
CTNNA1-238ENST00000523298 LARGE2Q8N3Y3 721 aa8.56□□□□□ -1.04
CTNNA1-238ENST00000523298 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.56□□□□□ -1.04
CTNNA1-238ENST00000523298 USTQ9Y2C2 406 aa8.56□□□□□ -1.04
CTNNA1-238ENST00000523298 PRR20EP86478 221 aa8.55□□□□□ -1.04
CTNNA1-238ENST00000523298 PRR20CP86479 221 aa8.55□□□□□ -1.04
CTNNA1-238ENST00000523298 PRR20DP86480 221 aa8.55□□□□□ -1.04
CTNNA1-238ENST00000523298 PRR20BP86481 221 aa8.55□□□□□ -1.04
CTNNA1-238ENST00000523298 PRR20AP86496 221 aa8.55□□□□□ -1.04
CTNNA1-238ENST00000523298 TRIM50Q86XT4 487 aa8.55□□□□□ -1.04
CTNNA1-238ENST00000523298 CYP4X1Q8N118 509 aa8.55□□□□□ -1.04
CTNNA1-238ENST00000523298 TTC24A2A3L6 582 aaPredicted RBP8.54□□□□□ -1.04
CTNNA1-238ENST00000523298 DHX9Q08211 1270 aaKnown RBP8.54□□□□□ -1.04
CTNNA1-238ENST00000523298 AGBL1Q96MI9 1066 aa8.54□□□□□ -1.04
CTNNA1-238ENST00000523298 ETNK1Q9HBU6 452 aa8.54□□□□□ -1.04
CTNNA1-238ENST00000523298 RAB6BQ9NRW1 208 aa8.54□□□□□ -1.04
CTNNA1-238ENST00000523298 WASF2Q9Y6W5 498 aa8.54□□□□□ -1.04
CTNNA1-238ENST00000523298 ZIC2O95409 532 aaPredicted RBP8.53□□□□□ -1.04
CTNNA1-238ENST00000523298 ATP1A2P50993 1020 aa8.53□□□□□ -1.04
CTNNA1-238ENST00000523298 MYT1Q01538 1121 aa8.53□□□□□ -1.04
CTNNA1-238ENST00000523298 CCDC125Q86Z20 511 aa8.53□□□□□ -1.04
CTNNA1-238ENST00000523298 TSEN2Q8NCE0 465 aaKnown RBP8.53□□□□□ -1.04
CTNNA1-238ENST00000523298 FAM200AQ8TCP9 573 aa8.53□□□□□ -1.04
CTNNA1-238ENST00000523298 ZNF358Q9NW07 568 aa8.53□□□□□ -1.04
CTNNA1-238ENST00000523298 EMILIN1Q9Y6C2 1016 aa8.53□□□□□ -1.04
CTNNA1-238ENST00000523298 MYCP01106 439 aaPredicted RBP8.52□□□□□ -1.05
CTNNA1-238ENST00000523298 WDR4P57081 412 aaKnown RBP8.52□□□□□ -1.05
CTNNA1-238ENST00000523298 PSME1Q06323 249 aa8.52□□□□□ -1.05
CTNNA1-238ENST00000523298 PURBQ96QR8 312 aaKnown RBP8.52□□□□□ -1.05
CTNNA1-238ENST00000523298 IL2RAP01589 272 aa8.51□□□□□ -1.05
CTNNA1-238ENST00000523298 GDF10P55107 478 aa8.51□□□□□ -1.05
CTNNA1-238ENST00000523298 SEC13P55735 322 aa8.51□□□□□ -1.05
CTNNA1-238ENST00000523298 OCLNQ16625 522 aa8.51□□□□□ -1.05
CTNNA1-238ENST00000523298 Q6ZVU0 165 aa8.51□□□□□ -1.05
CTNNA1-238ENST00000523298 USP3Q9Y6I4 520 aa8.51□□□□□ -1.05
CTNNA1-238ENST00000523298 ADH1AP07327 375 aa8.5□□□□□ -1.05
CTNNA1-238ENST00000523298 EPHA4P54764 986 aa8.5□□□□□ -1.05
CTNNA1-238ENST00000523298 CLP1Q92989 425 aaKnown RBP8.5□□□□□ -1.05
CTNNA1-238ENST00000523298 SIRT1Q96EB6 747 aa8.5□□□□□ -1.05
CTNNA1-238ENST00000523298 PRIMPOLQ96LW4 560 aa8.5□□□□□ -1.05
CTNNA1-238ENST00000523298 ARHGEF10LQ9HCE6 1279 aa8.5□□□□□ -1.05
CTNNA1-238ENST00000523298 SERTAD1Q9UHV2 236 aa8.5□□□□□ -1.05
CTNNA1-238ENST00000523298 HRH3Q9Y5N1 445 aa8.5□□□□□ -1.05
CTNNA1-238ENST00000523298 PRMT3O60678 531 aa8.49□□□□□ -1.05
CTNNA1-238ENST00000523298 CAPN12Q6ZSI9 719 aa8.49□□□□□ -1.05
CTNNA1-238ENST00000523298 AEBP1Q8IUX7 1158 aa8.49□□□□□ -1.05
CTNNA1-238ENST00000523298 TNS4Q8IZW8 715 aa8.49□□□□□ -1.05
CTNNA1-238ENST00000523298 PGPEP1Q9NXJ5 209 aa8.49□□□□□ -1.05
CTNNA1-238ENST00000523298 PDZRN3Q9UPQ7 1066 aa8.49□□□□□ -1.05
CTNNA1-238ENST00000523298 INHAP05111 366 aa8.48□□□□□ -1.05
CTNNA1-238ENST00000523298 SSFA2P28290 1259 aa8.48□□□□□ -1.05
CTNNA1-238ENST00000523298 WASLO00401 505 aaPredicted RBP8.47□□□□□ -1.05
CTNNA1-238ENST00000523298 C21orf2O43822 256 aa8.47□□□□□ -1.05
CTNNA1-238ENST00000523298 RELBQ01201 579 aa8.47□□□□□ -1.05
CTNNA1-238ENST00000523298 TBCELQ5QJ74 424 aa8.47□□□□□ -1.05
CTNNA1-238ENST00000523298 CYP2U1Q7Z449 544 aa8.47□□□□□ -1.05
CTNNA1-238ENST00000523298 ZNF395Q9H8N7 513 aaPredicted RBP8.47□□□□□ -1.05
CTNNA1-238ENST00000523298 A0A1W2PRU2 124 aa8.46□□□□□ -1.06
CTNNA1-238ENST00000523298 GNRH1P01148 92 aa8.46□□□□□ -1.06
CTNNA1-238ENST00000523298 SWI5Q1ZZU3 235 aa8.46□□□□□ -1.06
CTNNA1-238ENST00000523298 MEIOBQ8N635 442 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms