RNA–Protein interactions for RNA: ENST00000522230.1

CKS1BP7-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 7, humanhuman

BASIC

Gene CKS1BP7, Length 235 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP7-201ENST00000522230 PCDHGA11Q9Y5H2 935 aa4.69□□□□□ -1.66
CKS1BP7-201ENST00000522230 ELOAQ14241 798 aaKnown RBP4.68□□□□□ -1.66
CKS1BP7-201ENST00000522230 ZNF697Q5TEC3 545 aa4.68□□□□□ -1.66
CKS1BP7-201ENST00000522230 RNF20Q5VTR2 975 aa4.68□□□□□ -1.66
CKS1BP7-201ENST00000522230 SPRYD7Q5W111 196 aa4.68□□□□□ -1.66
CKS1BP7-201ENST00000522230 CCDC102BQ68D86 513 aa4.68□□□□□ -1.66
CKS1BP7-201ENST00000522230 KCTD17Q8N5Z5 321 aa4.68□□□□□ -1.66
CKS1BP7-201ENST00000522230 FAM200AQ8TCP9 573 aa4.68□□□□□ -1.66
CKS1BP7-201ENST00000522230 GZF1Q9H116 711 aaPredicted RBP4.68□□□□□ -1.66
CKS1BP7-201ENST00000522230 MAP4K5Q9Y4K4 846 aa4.68□□□□□ -1.66
CKS1BP7-201ENST00000522230 A0A0G2JS52 829 aa4.67□□□□□ -1.66
CKS1BP7-201ENST00000522230 WNT7AO00755 349 aa4.67□□□□□ -1.66
CKS1BP7-201ENST00000522230 PHLDB3Q6NSJ2 640 aa4.67□□□□□ -1.66
CKS1BP7-201ENST00000522230 TRIM50Q86XT4 487 aa4.67□□□□□ -1.66
CKS1BP7-201ENST00000522230 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.67□□□□□ -1.66
CKS1BP7-201ENST00000522230 ZNF784Q8NCA9 323 aaPredicted RBP4.67□□□□□ -1.66
CKS1BP7-201ENST00000522230 PRIMPOLQ96LW4 560 aa4.67□□□□□ -1.66
CKS1BP7-201ENST00000522230 CDK15Q96Q40 435 aa4.67□□□□□ -1.66
CKS1BP7-201ENST00000522230 PRKD2Q9BZL6 878 aa4.67□□□□□ -1.66
CKS1BP7-201ENST00000522230 PKD2L1Q9P0L9 805 aa4.67□□□□□ -1.66
CKS1BP7-201ENST00000522230 TNFRSF10AO00220 468 aa4.66□□□□□ -1.66
CKS1BP7-201ENST00000522230 LZTS3O60299 673 aaPredicted RBP4.66□□□□□ -1.66
CKS1BP7-201ENST00000522230 PRMT3O60678 531 aa4.66□□□□□ -1.66
CKS1BP7-201ENST00000522230 ADH1CP00326 375 aa4.66□□□□□ -1.66
CKS1BP7-201ENST00000522230 ALDH1A1P00352 501 aa4.66□□□□□ -1.66
CKS1BP7-201ENST00000522230 ADD1P35611 737 aaKnown RBP4.66□□□□□ -1.66
CKS1BP7-201ENST00000522230 PPP1R26Q5T8A7 1209 aaPredicted RBP4.66□□□□□ -1.66
CKS1BP7-201ENST00000522230 SEPT12Q8IYM1 358 aa4.66□□□□□ -1.66
CKS1BP7-201ENST00000522230 TSEN2Q8NCE0 465 aaKnown RBP4.66□□□□□ -1.66
CKS1BP7-201ENST00000522230 OSBPL3Q9H4L5 887 aa4.66□□□□□ -1.66
CKS1BP7-201ENST00000522230 CDV3Q9UKY7 258 aaKnown RBP4.66□□□□□ -1.66
CKS1BP7-201ENST00000522230 IVNS1ABPQ9Y6Y0 642 aa4.66□□□□□ -1.66
CKS1BP7-201ENST00000522230 J3QL48 77 aa4.65□□□□□ -1.67
CKS1BP7-201ENST00000522230 LILRA1O75019 489 aa4.65□□□□□ -1.67
CKS1BP7-201ENST00000522230 BRD1O95696 1058 aa4.65□□□□□ -1.67
CKS1BP7-201ENST00000522230 MYCP01106 439 aaPredicted RBP4.65□□□□□ -1.67
CKS1BP7-201ENST00000522230 ATP1A2P50993 1020 aa4.65□□□□□ -1.67
CKS1BP7-201ENST00000522230 ERVK-9P63128 1117 aa4.65□□□□□ -1.67
CKS1BP7-201ENST00000522230 USP4Q13107 963 aa4.65□□□□□ -1.67
CKS1BP7-201ENST00000522230 CBLBQ13191 982 aa4.65□□□□□ -1.67
CKS1BP7-201ENST00000522230 IFFO2Q5TF58 517 aa4.65□□□□□ -1.67
CKS1BP7-201ENST00000522230 CC2D2BQ6DHV5 1058 aa4.65□□□□□ -1.67
CKS1BP7-201ENST00000522230 CCDC116Q8IYX3 515 aa4.65□□□□□ -1.67
CKS1BP7-201ENST00000522230 SIX5Q8N196 739 aa4.65□□□□□ -1.67
CKS1BP7-201ENST00000522230 LARGE2Q8N3Y3 721 aa4.65□□□□□ -1.67
CKS1BP7-201ENST00000522230 PURBQ96QR8 312 aaKnown RBP4.65□□□□□ -1.67
CKS1BP7-201ENST00000522230 RAB6BQ9NRW1 208 aa4.65□□□□□ -1.67
CKS1BP7-201ENST00000522230 TMEM229AB2RXF0 380 aa4.64□□□□□ -1.67
CKS1BP7-201ENST00000522230 ATP2B4P23634 1241 aa4.64□□□□□ -1.67
CKS1BP7-201ENST00000522230 SCNN1DP51172 638 aa4.64□□□□□ -1.67
CKS1BP7-201ENST00000522230 SEC13P55735 322 aa4.64□□□□□ -1.67
CKS1BP7-201ENST00000522230 NNTQ13423 1086 aa4.64□□□□□ -1.67
CKS1BP7-201ENST00000522230 ZNF598Q86UK7 904 aaKnown RBP4.64□□□□□ -1.67
CKS1BP7-201ENST00000522230 HINFPQ9BQA5 517 aa4.64□□□□□ -1.67
CKS1BP7-201ENST00000522230 ZFAND3Q9H8U3 227 aa4.64□□□□□ -1.67
CKS1BP7-201ENST00000522230 ZNF358Q9NW07 568 aa4.64□□□□□ -1.67
CKS1BP7-201ENST00000522230 SERTAD1Q9UHV2 236 aa4.64□□□□□ -1.67
CKS1BP7-201ENST00000522230 SSFA2P28290 1259 aa4.63□□□□□ -1.67
CKS1BP7-201ENST00000522230 PDE4CQ08493 712 aa4.63□□□□□ -1.67
CKS1BP7-201ENST00000522230 TBCELQ5QJ74 424 aa4.63□□□□□ -1.67
CKS1BP7-201ENST00000522230 CAPN12Q6ZSI9 719 aa4.63□□□□□ -1.67
CKS1BP7-201ENST00000522230 TNS4Q8IZW8 715 aa4.63□□□□□ -1.67
CKS1BP7-201ENST00000522230 CLP1Q92989 425 aaKnown RBP4.63□□□□□ -1.67
CKS1BP7-201ENST00000522230 SIRT1Q96EB6 747 aa4.63□□□□□ -1.67
CKS1BP7-201ENST00000522230 AGBL1Q96MI9 1066 aa4.63□□□□□ -1.67
CKS1BP7-201ENST00000522230 MKNK1Q9BUB5 465 aa4.63□□□□□ -1.67
CKS1BP7-201ENST00000522230 ETNK1Q9HBU6 452 aa4.63□□□□□ -1.67
CKS1BP7-201ENST00000522230 GDF9O60383 454 aa4.62□□□□□ -1.67
CKS1BP7-201ENST00000522230 SERPINB4P48594 390 aa4.62□□□□□ -1.67
CKS1BP7-201ENST00000522230 GDF10P55107 478 aa4.62□□□□□ -1.67
CKS1BP7-201ENST00000522230 MYT1Q01538 1121 aa4.62□□□□□ -1.67
CKS1BP7-201ENST00000522230 DHX9Q08211 1270 aaKnown RBP4.62□□□□□ -1.67
CKS1BP7-201ENST00000522230 KCNA1Q09470 495 aa4.62□□□□□ -1.67
CKS1BP7-201ENST00000522230 NR5A1Q13285 461 aa4.62□□□□□ -1.67
CKS1BP7-201ENST00000522230 OCLNQ16625 522 aa4.62□□□□□ -1.67
CKS1BP7-201ENST00000522230 TRIM67Q6ZTA4 783 aa4.62□□□□□ -1.67
CKS1BP7-201ENST00000522230 MPNDQ8N594 471 aa4.62□□□□□ -1.67
CKS1BP7-201ENST00000522230 ITPKCQ96DU7 683 aa4.62□□□□□ -1.67
CKS1BP7-201ENST00000522230 ESF1Q9H501 851 aaKnown RBP4.62□□□□□ -1.67
CKS1BP7-201ENST00000522230 ARHGEF10LQ9HCE6 1279 aa4.62□□□□□ -1.67
CKS1BP7-201ENST00000522230 RBM19Q9Y4C8 960 aaKnown RBP4.62□□□□□ -1.67
CKS1BP7-201ENST00000522230 USP3Q9Y6I4 520 aa4.62□□□□□ -1.67
CKS1BP7-201ENST00000522230 WASF2Q9Y6W5 498 aa4.62□□□□□ -1.67
CKS1BP7-201ENST00000522230 TTC24A2A3L6 582 aaPredicted RBP4.61□□□□□ -1.67
CKS1BP7-201ENST00000522230 SWI5Q1ZZU3 235 aa4.61□□□□□ -1.67
CKS1BP7-201ENST00000522230 KDF1Q8NAX2 398 aaPredicted RBP4.61□□□□□ -1.67
CKS1BP7-201ENST00000522230 ANO2Q9NQ90 1003 aa4.61□□□□□ -1.67
CKS1BP7-201ENST00000522230 CXXC1Q9P0U4 656 aaPredicted RBP4.61□□□□□ -1.67
CKS1BP7-201ENST00000522230 SEPT3Q9UH03 358 aa4.61□□□□□ -1.67
CKS1BP7-201ENST00000522230 ZIC2O95409 532 aaPredicted RBP4.6□□□□□ -1.67
CKS1BP7-201ENST00000522230 IL2RAP01589 272 aa4.6□□□□□ -1.67
CKS1BP7-201ENST00000522230 SMPD1P17405 629 aa4.6□□□□□ -1.67
CKS1BP7-201ENST00000522230 WDR4P57081 412 aaKnown RBP4.6□□□□□ -1.67
CKS1BP7-201ENST00000522230 RELBQ01201 579 aa4.6□□□□□ -1.67
CKS1BP7-201ENST00000522230 FKBP5Q13451 457 aaPredicted RBP4.6□□□□□ -1.67
CKS1BP7-201ENST00000522230 TMCO4Q5TGY1 634 aa4.6□□□□□ -1.67
CKS1BP7-201ENST00000522230 TXNDC2Q86VQ3 553 aa4.6□□□□□ -1.67
CKS1BP7-201ENST00000522230 CYP4X1Q8N118 509 aa4.6□□□□□ -1.67
CKS1BP7-201ENST00000522230 SNIP1Q8TAD8 396 aaKnown RBP4.6□□□□□ -1.67
CKS1BP7-201ENST00000522230 SCG3Q8WXD2 468 aaKnown RBP4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms