RNA–Protein interactions for RNA: ENST00000522165.5

COL13A1-214, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-214ENST00000522165 NCOA3Q9Y6Q9 1424 aa32.94■■■□□ 2.86
COL13A1-214ENST00000522165 HTATSF1O43719 755 aaKnown RBP32.93■■■□□ 2.86
COL13A1-214ENST00000522165 KRT28Q7Z3Y7 464 aa32.93■■■□□ 2.86
COL13A1-214ENST00000522165 DCCP43146 1447 aa32.92■■■□□ 2.86
COL13A1-214ENST00000522165 HSPA2P54652 639 aa32.92■■■□□ 2.86
COL13A1-214ENST00000522165 ZBTB40Q9NUA8 1239 aa32.92■■■□□ 2.86
COL13A1-214ENST00000522165 GCP02774 474 aa32.91■■■□□ 2.86
COL13A1-214ENST00000522165 HAP1P54257 671 aaPredicted RBP32.91■■■□□ 2.86
COL13A1-214ENST00000522165 MST1RQ04912 1400 aa32.91■■■□□ 2.86
COL13A1-214ENST00000522165 ATF3P18847 181 aa32.9■■■□□ 2.86
COL13A1-214ENST00000522165 USP19O94966 1318 aa32.9■■■□□ 2.86
COL13A1-214ENST00000522165 ANP32AP39687 249 aaKnown RBP32.9■■■□□ 2.86
COL13A1-214ENST00000522165 KRT24Q2M2I5 525 aa32.89■■■□□ 2.86
COL13A1-214ENST00000522165 LRRC37A3O60309 1634 aa32.88■■■□□ 2.85
COL13A1-214ENST00000522165 GNAT3A8MTJ3 354 aa32.87■■■□□ 2.85
COL13A1-214ENST00000522165 ARHGEF25Q86VW2 580 aa32.87■■■□□ 2.85
COL13A1-214ENST00000522165 ABCC4O15439 1325 aa32.87■■■□□ 2.85
COL13A1-214ENST00000522165 HDAC1Q13547 482 aaPredicted RBP32.87■■■□□ 2.85
COL13A1-214ENST00000522165 FAM161AQ3B820 660 aa32.87■■■□□ 2.85
COL13A1-214ENST00000522165 USHBP1Q8N6Y0 703 aa32.87■■■□□ 2.85
COL13A1-214ENST00000522165 LMOD2Q6P5Q4 547 aa32.86■■■□□ 2.85
COL13A1-214ENST00000522165 ZBTB7CA1YPR0 619 aa32.86■■■□□ 2.85
COL13A1-214ENST00000522165 NBPF6Q5VWK0 638 aa32.86■■■□□ 2.85
COL13A1-214ENST00000522165 NBPF4Q96M43 638 aa32.86■■■□□ 2.85
COL13A1-214ENST00000522165 MSH6P52701 1360 aa32.85■■■□□ 2.85
COL13A1-214ENST00000522165 API5Q9BZZ5 524 aaKnown RBP32.84■■■□□ 2.85
COL13A1-214ENST00000522165 MIS18AQ9NYP9 233 aa32.84■■■□□ 2.85
COL13A1-214ENST00000522165 TSPYL4Q9UJ04 414 aa32.84■■■□□ 2.85
COL13A1-214ENST00000522165 MAP3K5Q99683 1374 aa32.84■■■□□ 2.85
COL13A1-214ENST00000522165 C8orf34Q49A92 452 aa32.84■■■□□ 2.85
COL13A1-214ENST00000522165 PDZRN3Q9UPQ7 1066 aa32.82■■■□□ 2.85
COL13A1-214ENST00000522165 ALS2Q96Q42 1657 aa32.82■■■□□ 2.84
COL13A1-214ENST00000522165 CHMP4BQ9H444 224 aaKnown RBP32.81■■■□□ 2.84
COL13A1-214ENST00000522165 ZBTB7BO15156 539 aaPredicted RBP32.81■■■□□ 2.84
COL13A1-214ENST00000522165 CADPS2Q86UW7 1296 aa32.79■■■□□ 2.84
COL13A1-214ENST00000522165 RGPD2P0DJD1 1756 aa32.79■■■□□ 2.84
COL13A1-214ENST00000522165 IL17REQ8NFR9 667 aa32.78■■■□□ 2.84
COL13A1-214ENST00000522165 PLEKHG5O94827 1062 aa32.78■■■□□ 2.84
COL13A1-214ENST00000522165 IPO9Q96P70 1041 aaKnown RBP32.78■■■□□ 2.84
COL13A1-214ENST00000522165 KDM4FA0A1W2PPD8 638 aa32.77■■■□□ 2.84
COL13A1-214ENST00000522165 LMTK3Q96Q04 1460 aa32.76■■■□□ 2.84
COL13A1-214ENST00000522165 NPM2Q86SE8 214 aaKnown RBP32.76■■■□□ 2.83
COL13A1-214ENST00000522165 LRRC59Q96AG4 307 aaKnown RBP32.76■■■□□ 2.83
COL13A1-214ENST00000522165 NCAPD2Q15021 1401 aa32.75■■■□□ 2.83
COL13A1-214ENST00000522165 MED1Q15648 1581 aaPredicted RBP32.74■■■□□ 2.83
COL13A1-214ENST00000522165 BABAM1Q9NWV8 329 aa32.73■■■□□ 2.83
COL13A1-214ENST00000522165 SMC5Q8IY18 1101 aa32.73■■■□□ 2.83
COL13A1-214ENST00000522165 RGS12O14924 1447 aa32.72■■■□□ 2.83
COL13A1-214ENST00000522165 ANKRD24Q8TF21 1146 aa32.72■■■□□ 2.83
COL13A1-214ENST00000522165 PTPRCP08575 1304 aa32.72■■■□□ 2.83
COL13A1-214ENST00000522165 STRCQ7RTU9 1775 aa32.71■■■□□ 2.83
COL13A1-214ENST00000522165 DDX17Q92841 729 aaKnown RBP32.71■■■□□ 2.83
COL13A1-214ENST00000522165 TAF7Q15545 349 aaPredicted RBP32.71■■■□□ 2.83
COL13A1-214ENST00000522165 NPHP3Q7Z494 1330 aa32.7■■■□□ 2.83
COL13A1-214ENST00000522165 AXIN2Q9Y2T1 843 aa32.7■■■□□ 2.83
COL13A1-214ENST00000522165 XIRP1Q702N8 1843 aaKnown RBP32.7■■■□□ 2.82
COL13A1-214ENST00000522165 CEMIPQ8WUJ3 1361 aa32.69■■■□□ 2.82
COL13A1-214ENST00000522165 INTS3Q68E01 1043 aaKnown RBP32.69■■■□□ 2.82
COL13A1-214ENST00000522165 CAMTA1Q9Y6Y1 1673 aa32.69■■■□□ 2.82
COL13A1-214ENST00000522165 SLC4A2P04920 1241 aa32.68■■■□□ 2.82
COL13A1-214ENST00000522165 VIRMAQ69YN4 1812 aaKnown RBP32.67■■■□□ 2.82
COL13A1-214ENST00000522165 PLEKHO1Q53GL0 409 aaPredicted RBP32.66■■■□□ 2.82
COL13A1-214ENST00000522165 LMO7Q8WWI1 1683 aa32.65■■■□□ 2.82
COL13A1-214ENST00000522165 ANP32EQ9BTT0 268 aa32.65■■■□□ 2.82
COL13A1-214ENST00000522165 NOP58Q9Y2X3 529 aaKnown RBP32.65■■■□□ 2.82
COL13A1-214ENST00000522165 SOS1Q07889 1333 aaPredicted RBP32.64■■■□□ 2.82
COL13A1-214ENST00000522165 TNS3Q68CZ2 1445 aa32.64■■■□□ 2.82
COL13A1-214ENST00000522165 ZC3H6P61129 1189 aaKnown RBP32.64■■■□□ 2.82
COL13A1-214ENST00000522165 AMOTQ4VCS5 1084 aa32.64■■■□□ 2.82
COL13A1-214ENST00000522165 C1orf115Q9H7X2 142 aa32.64■■■□□ 2.82
COL13A1-214ENST00000522165 PXDNQ92626 1479 aa32.64■■■□□ 2.82
COL13A1-214ENST00000522165 ERICH6Q7L0X2 663 aa32.63■■■□□ 2.81
COL13A1-214ENST00000522165 RGPD5Q99666 1765 aa32.63■■■□□ 2.81
COL13A1-214ENST00000522165 AKAP4Q5JQC9 854 aa32.63■■■□□ 2.81
COL13A1-214ENST00000522165 ZNF530Q6P9A1 599 aaPredicted RBP32.62■■■□□ 2.81
COL13A1-214ENST00000522165 ERBB3P21860 1342 aa32.61■■■□□ 2.81
COL13A1-214ENST00000522165 LGR6Q9HBX8 967 aa32.6■■■□□ 2.81
COL13A1-214ENST00000522165 NUCB1Q02818 461 aa32.59■■■□□ 2.81
COL13A1-214ENST00000522165 G2E3Q7L622 706 aa32.59■■■□□ 2.81
COL13A1-214ENST00000522165 STK31Q9BXU1 1019 aa32.59■■■□□ 2.81
COL13A1-214ENST00000522165 CCDC30Q5VVM6 783 aa32.58■■■□□ 2.81
COL13A1-214ENST00000522165 SPATA31A3Q5VYP0 1347 aa32.58■■■□□ 2.81
COL13A1-214ENST00000522165 SIRT2Q8IXJ6 389 aa32.58■■■□□ 2.81
COL13A1-214ENST00000522165 FAM208AQ9UK61 1670 aaKnown RBP32.58■■■□□ 2.81
COL13A1-214ENST00000522165 ZBTB47Q9UFB7 747 aaPredicted RBP32.57■■■□□ 2.8
COL13A1-214ENST00000522165 GCC1Q96CN9 775 aa32.56■■■□□ 2.8
COL13A1-214ENST00000522165 BRINP3Q76B58 766 aa32.55■■■□□ 2.8
COL13A1-214ENST00000522165 COL18A1P39060 1754 aa32.55■■■□□ 2.8
COL13A1-214ENST00000522165 ZNF335Q9H4Z2 1342 aaPredicted RBP32.54■■■□□ 2.8
COL13A1-214ENST00000522165 C1orf141Q5JVX7 400 aa32.54■■■□□ 2.8
COL13A1-214ENST00000522165 CRYBG1Q9Y4K1 1723 aa32.53■■■□□ 2.8
COL13A1-214ENST00000522165 CABLES1Q8TDN4 633 aa32.53■■■□□ 2.8
COL13A1-214ENST00000522165 KDM3BQ7LBC6 1761 aa32.53■■■□□ 2.8
COL13A1-214ENST00000522165 OVOS2A0A0G2JMS6 1433 aa32.52■■■□□ 2.8
COL13A1-214ENST00000522165 CACNA1FO60840 1977 aa32.52■■■□□ 2.8
COL13A1-214ENST00000522165 MPRIPQ6WCQ1 1025 aa32.52■■■□□ 2.8
COL13A1-214ENST00000522165 RNMTO43148 476 aaKnown RBP32.51■■■□□ 2.8
COL13A1-214ENST00000522165 CHD1LQ86WJ1 897 aa32.51■■■□□ 2.8
COL13A1-214ENST00000522165 ABCC6O95255 1503 aa32.51■■■□□ 2.79
COL13A1-214ENST00000522165 TEFQ10587 303 aa32.5■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms