RNA–Protein interactions for RNA: ENST00000522165.5

COL13A1-214, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,061 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-214ENST00000522165 NCOA3Q9Y6Q9 1424 aa32.94■■■□□ 2.86
COL13A1-214ENST00000522165 HTATSF1O43719 755 aaKnown RBP32.93■■■□□ 2.86
COL13A1-214ENST00000522165 KRT28Q7Z3Y7 464 aa32.93■■■□□ 2.86
COL13A1-214ENST00000522165 DCCP43146 1447 aa32.92■■■□□ 2.86
COL13A1-214ENST00000522165 HSPA2P54652 639 aa32.92■■■□□ 2.86
COL13A1-214ENST00000522165 ZBTB40Q9NUA8 1239 aa32.92■■■□□ 2.86
COL13A1-214ENST00000522165 GCP02774 474 aa32.91■■■□□ 2.86
COL13A1-214ENST00000522165 HAP1P54257 671 aaPredicted RBP32.91■■■□□ 2.86
COL13A1-214ENST00000522165 MST1RQ04912 1400 aa32.91■■■□□ 2.86
COL13A1-214ENST00000522165 ATF3P18847 181 aa32.9■■■□□ 2.86
COL13A1-214ENST00000522165 USP19O94966 1318 aa32.9■■■□□ 2.86
COL13A1-214ENST00000522165 ANP32AP39687 249 aaKnown RBP32.9■■■□□ 2.86
COL13A1-214ENST00000522165 KRT24Q2M2I5 525 aa32.89■■■□□ 2.86
COL13A1-214ENST00000522165 LRRC37A3O60309 1634 aa32.88■■■□□ 2.85
COL13A1-214ENST00000522165 GNAT3A8MTJ3 354 aa32.87■■■□□ 2.85
COL13A1-214ENST00000522165 ARHGEF25Q86VW2 580 aa32.87■■■□□ 2.85
COL13A1-214ENST00000522165 ABCC4O15439 1325 aa32.87■■■□□ 2.85
COL13A1-214ENST00000522165 HDAC1Q13547 482 aaPredicted RBP32.87■■■□□ 2.85
COL13A1-214ENST00000522165 FAM161AQ3B820 660 aa32.87■■■□□ 2.85
COL13A1-214ENST00000522165 USHBP1Q8N6Y0 703 aa32.87■■■□□ 2.85
COL13A1-214ENST00000522165 LMOD2Q6P5Q4 547 aa32.86■■■□□ 2.85
COL13A1-214ENST00000522165 ZBTB7CA1YPR0 619 aa32.86■■■□□ 2.85
COL13A1-214ENST00000522165 NBPF6Q5VWK0 638 aa32.86■■■□□ 2.85
COL13A1-214ENST00000522165 NBPF4Q96M43 638 aa32.86■■■□□ 2.85
COL13A1-214ENST00000522165 MSH6P52701 1360 aa32.85■■■□□ 2.85
COL13A1-214ENST00000522165 API5Q9BZZ5 524 aaKnown RBP32.84■■■□□ 2.85
COL13A1-214ENST00000522165 MIS18AQ9NYP9 233 aa32.84■■■□□ 2.85
COL13A1-214ENST00000522165 TSPYL4Q9UJ04 414 aa32.84■■■□□ 2.85
COL13A1-214ENST00000522165 MAP3K5Q99683 1374 aa32.84■■■□□ 2.85
COL13A1-214ENST00000522165 C8orf34Q49A92 452 aa32.84■■■□□ 2.85
COL13A1-214ENST00000522165 PDZRN3Q9UPQ7 1066 aa32.82■■■□□ 2.85
COL13A1-214ENST00000522165 ALS2Q96Q42 1657 aa32.82■■■□□ 2.84
COL13A1-214ENST00000522165 CHMP4BQ9H444 224 aaKnown RBP32.81■■■□□ 2.84
COL13A1-214ENST00000522165 ZBTB7BO15156 539 aaPredicted RBP32.81■■■□□ 2.84
COL13A1-214ENST00000522165 CADPS2Q86UW7 1296 aa32.79■■■□□ 2.84
COL13A1-214ENST00000522165 RGPD2P0DJD1 1756 aa32.79■■■□□ 2.84
COL13A1-214ENST00000522165 IL17REQ8NFR9 667 aa32.78■■■□□ 2.84
COL13A1-214ENST00000522165 PLEKHG5O94827 1062 aa32.78■■■□□ 2.84
COL13A1-214ENST00000522165 IPO9Q96P70 1041 aaKnown RBP32.78■■■□□ 2.84
COL13A1-214ENST00000522165 KDM4FA0A1W2PPD8 638 aa32.77■■■□□ 2.84
COL13A1-214ENST00000522165 LMTK3Q96Q04 1460 aa32.76■■■□□ 2.84
COL13A1-214ENST00000522165 NPM2Q86SE8 214 aaKnown RBP32.76■■■□□ 2.83
COL13A1-214ENST00000522165 LRRC59Q96AG4 307 aaKnown RBP32.76■■■□□ 2.83
COL13A1-214ENST00000522165 NCAPD2Q15021 1401 aa32.75■■■□□ 2.83
COL13A1-214ENST00000522165 MED1Q15648 1581 aaPredicted RBP32.74■■■□□ 2.83
COL13A1-214ENST00000522165 BABAM1Q9NWV8 329 aa32.73■■■□□ 2.83
COL13A1-214ENST00000522165 SMC5Q8IY18 1101 aa32.73■■■□□ 2.83
COL13A1-214ENST00000522165 RGS12O14924 1447 aa32.72■■■□□ 2.83
COL13A1-214ENST00000522165 ANKRD24Q8TF21 1146 aa32.72■■■□□ 2.83
COL13A1-214ENST00000522165 PTPRCP08575 1304 aa32.72■■■□□ 2.83
COL13A1-214ENST00000522165 STRCQ7RTU9 1775 aa32.71■■■□□ 2.83
COL13A1-214ENST00000522165 DDX17Q92841 729 aaKnown RBP32.71■■■□□ 2.83
COL13A1-214ENST00000522165 TAF7Q15545 349 aaPredicted RBP32.71■■■□□ 2.83
COL13A1-214ENST00000522165 NPHP3Q7Z494 1330 aa32.7■■■□□ 2.83
COL13A1-214ENST00000522165 AXIN2Q9Y2T1 843 aa32.7■■■□□ 2.83
COL13A1-214ENST00000522165 XIRP1Q702N8 1843 aaKnown RBP32.7■■■□□ 2.82
COL13A1-214ENST00000522165 CEMIPQ8WUJ3 1361 aa32.69■■■□□ 2.82
COL13A1-214ENST00000522165 INTS3Q68E01 1043 aaKnown RBP32.69■■■□□ 2.82
COL13A1-214ENST00000522165 CAMTA1Q9Y6Y1 1673 aa32.69■■■□□ 2.82
COL13A1-214ENST00000522165 SLC4A2P04920 1241 aa32.68■■■□□ 2.82
COL13A1-214ENST00000522165 VIRMAQ69YN4 1812 aaKnown RBP32.67■■■□□ 2.82
COL13A1-214ENST00000522165 PLEKHO1Q53GL0 409 aaPredicted RBP32.66■■■□□ 2.82
COL13A1-214ENST00000522165 LMO7Q8WWI1 1683 aa32.65■■■□□ 2.82
COL13A1-214ENST00000522165 ANP32EQ9BTT0 268 aa32.65■■■□□ 2.82
COL13A1-214ENST00000522165 NOP58Q9Y2X3 529 aaKnown RBP32.65■■■□□ 2.82
COL13A1-214ENST00000522165 SOS1Q07889 1333 aaPredicted RBP32.64■■■□□ 2.82
COL13A1-214ENST00000522165 TNS3Q68CZ2 1445 aa32.64■■■□□ 2.82
COL13A1-214ENST00000522165 ZC3H6P61129 1189 aaKnown RBP32.64■■■□□ 2.82
COL13A1-214ENST00000522165 AMOTQ4VCS5 1084 aa32.64■■■□□ 2.82
COL13A1-214ENST00000522165 C1orf115Q9H7X2 142 aa32.64■■■□□ 2.82
COL13A1-214ENST00000522165 PXDNQ92626 1479 aa32.64■■■□□ 2.82
COL13A1-214ENST00000522165 ERICH6Q7L0X2 663 aa32.63■■■□□ 2.81
COL13A1-214ENST00000522165 RGPD5Q99666 1765 aa32.63■■■□□ 2.81
COL13A1-214ENST00000522165 AKAP4Q5JQC9 854 aa32.63■■■□□ 2.81
COL13A1-214ENST00000522165 ZNF530Q6P9A1 599 aaPredicted RBP32.62■■■□□ 2.81
COL13A1-214ENST00000522165 ERBB3P21860 1342 aa32.61■■■□□ 2.81
COL13A1-214ENST00000522165 LGR6Q9HBX8 967 aa32.6■■■□□ 2.81
COL13A1-214ENST00000522165 NUCB1Q02818 461 aa32.59■■■□□ 2.81
COL13A1-214ENST00000522165 G2E3Q7L622 706 aa32.59■■■□□ 2.81
COL13A1-214ENST00000522165 STK31Q9BXU1 1019 aa32.59■■■□□ 2.81
COL13A1-214ENST00000522165 CCDC30Q5VVM6 783 aa32.58■■■□□ 2.81
COL13A1-214ENST00000522165 SPATA31A3Q5VYP0 1347 aa32.58■■■□□ 2.81
COL13A1-214ENST00000522165 SIRT2Q8IXJ6 389 aa32.58■■■□□ 2.81
COL13A1-214ENST00000522165 FAM208AQ9UK61 1670 aaKnown RBP32.58■■■□□ 2.81
COL13A1-214ENST00000522165 ZBTB47Q9UFB7 747 aaPredicted RBP32.57■■■□□ 2.8
COL13A1-214ENST00000522165 GCC1Q96CN9 775 aa32.56■■■□□ 2.8
COL13A1-214ENST00000522165 BRINP3Q76B58 766 aa32.55■■■□□ 2.8
COL13A1-214ENST00000522165 COL18A1P39060 1754 aa32.55■■■□□ 2.8
COL13A1-214ENST00000522165 ZNF335Q9H4Z2 1342 aaPredicted RBP32.54■■■□□ 2.8
COL13A1-214ENST00000522165 C1orf141Q5JVX7 400 aa32.54■■■□□ 2.8
COL13A1-214ENST00000522165 CRYBG1Q9Y4K1 1723 aa32.53■■■□□ 2.8
COL13A1-214ENST00000522165 CABLES1Q8TDN4 633 aa32.53■■■□□ 2.8
COL13A1-214ENST00000522165 KDM3BQ7LBC6 1761 aa32.53■■■□□ 2.8
COL13A1-214ENST00000522165 OVOS2A0A0G2JMS6 1433 aa32.52■■■□□ 2.8
COL13A1-214ENST00000522165 CACNA1FO60840 1977 aa32.52■■■□□ 2.8
COL13A1-214ENST00000522165 MPRIPQ6WCQ1 1025 aa32.52■■■□□ 2.8
COL13A1-214ENST00000522165 RNMTO43148 476 aaKnown RBP32.51■■■□□ 2.8
COL13A1-214ENST00000522165 CHD1LQ86WJ1 897 aa32.51■■■□□ 2.8
COL13A1-214ENST00000522165 ABCC6O95255 1503 aa32.51■■■□□ 2.79
COL13A1-214ENST00000522165 TEFQ10587 303 aa32.5■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms