RNA–Protein interactions for RNA: ENST00000519116.5

CTNNA1-214, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-214ENST00000519116 SLC27A3Q5K4L6 730 aa9.4□□□□□ -0.9
CTNNA1-214ENST00000519116 CENPJQ9HC77 1338 aaPredicted RBP9.39□□□□□ -0.91
CTNNA1-214ENST00000519116 NLGN2Q8NFZ4 835 aa9.39□□□□□ -0.91
CTNNA1-214ENST00000519116 GPBP1L1Q9HC44 474 aaPredicted RBP9.39□□□□□ -0.91
CTNNA1-214ENST00000519116 LRRC4BQ9NT99 713 aa9.39□□□□□ -0.91
CTNNA1-214ENST00000519116 SOX12O15370 315 aa9.38□□□□□ -0.91
CTNNA1-214ENST00000519116 YBX3P16989 372 aaKnown RBP eCLIP9.38□□□□□ -0.91
CTNNA1-214ENST00000519116 TFCP2L1Q9NZI6 479 aa9.38□□□□□ -0.91
CTNNA1-214ENST00000519116 TOPAZ1Q8N9V7 1692 aa9.38□□□□□ -0.91
CTNNA1-214ENST00000519116 ATP10DQ9P241 1426 aa9.38□□□□□ -0.91
CTNNA1-214ENST00000519116 PNPLA7Q6ZV29 1317 aa9.37□□□□□ -0.91
CTNNA1-214ENST00000519116 TTC21BQ7Z4L5 1316 aa9.37□□□□□ -0.91
CTNNA1-214ENST00000519116 IL2RBP14784 551 aa9.37□□□□□ -0.91
CTNNA1-214ENST00000519116 TTC21AQ8NDW8 1320 aa9.36□□□□□ -0.91
CTNNA1-214ENST00000519116 NLRP2Q9NX02 1062 aa9.36□□□□□ -0.91
CTNNA1-214ENST00000519116 ARHGEF28Q8N1W1 1705 aaKnown RBP9.36□□□□□ -0.91
CTNNA1-214ENST00000519116 RAB3GAP2Q9H2M9 1393 aa9.36□□□□□ -0.91
CTNNA1-214ENST00000519116 PAPPAQ13219 1627 aa9.35□□□□□ -0.91
CTNNA1-214ENST00000519116 NBPF1Q3BBV0 1214 aa9.35□□□□□ -0.91
CTNNA1-214ENST00000519116 SHANK3Q9BYB0 1731 aa9.35□□□□□ -0.91
CTNNA1-214ENST00000519116 SBF2Q86WG5 1849 aa9.35□□□□□ -0.91
CTNNA1-214ENST00000519116 GOLGB1Q14789 3259 aaKnown RBP9.35□□□□□ -0.91
CTNNA1-214ENST00000519116 ABCC6O95255 1503 aa9.35□□□□□ -0.91
CTNNA1-214ENST00000519116 ERBB3P21860 1342 aa9.34□□□□□ -0.91
CTNNA1-214ENST00000519116 EVC2Q86UK5 1308 aa9.34□□□□□ -0.91
CTNNA1-214ENST00000519116 CD2APQ9Y5K6 639 aa9.34□□□□□ -0.91
CTNNA1-214ENST00000519116 CHD4Q14839 1912 aa9.34□□□□□ -0.91
CTNNA1-214ENST00000519116 TRPM1Q7Z4N2 1603 aa9.33□□□□□ -0.92
CTNNA1-214ENST00000519116 COL18A1P39060 1754 aa9.32□□□□□ -0.92
CTNNA1-214ENST00000519116 GALR2O43603 387 aaPredicted RBP9.32□□□□□ -0.92
CTNNA1-214ENST00000519116 APLP1P51693 650 aa9.32□□□□□ -0.92
CTNNA1-214ENST00000519116 DDX54Q8TDD1 881 aaKnown RBP9.32□□□□□ -0.92
CTNNA1-214ENST00000519116 ZNF526Q8TF50 670 aaPredicted RBP9.32□□□□□ -0.92
CTNNA1-214ENST00000519116 ADCY9O60503 1353 aa9.32□□□□□ -0.92
CTNNA1-214ENST00000519116 NHSQ6T4R5 1651 aa9.32□□□□□ -0.92
CTNNA1-214ENST00000519116 HMGB2P26583 209 aaKnown RBP9.31□□□□□ -0.92
CTNNA1-214ENST00000519116 KCNQ4P56696 695 aa9.31□□□□□ -0.92
CTNNA1-214ENST00000519116 ANKRD24Q8TF21 1146 aa9.31□□□□□ -0.92
CTNNA1-214ENST00000519116 SYTL4Q96C24 671 aaPredicted RBP9.31□□□□□ -0.92
CTNNA1-214ENST00000519116 NFAT5O94916 1531 aa9.31□□□□□ -0.92
CTNNA1-214ENST00000519116 PRIM1P49642 420 aaKnown RBP9.3□□□□□ -0.92
CTNNA1-214ENST00000519116 COL23A1Q86Y22 540 aaPredicted RBP9.3□□□□□ -0.92
CTNNA1-214ENST00000519116 CCNL1Q9UK58 526 aaPredicted RBP9.3□□□□□ -0.92
CTNNA1-214ENST00000519116 PIK3C2AO00443 1686 aa9.29□□□□□ -0.92
CTNNA1-214ENST00000519116 USP31Q70CQ4 1352 aa9.29□□□□□ -0.92
CTNNA1-214ENST00000519116 KTN1Q86UP2 1357 aaKnown RBP9.29□□□□□ -0.92
CTNNA1-214ENST00000519116 ANKRD36BQ8N2N9 1353 aa9.29□□□□□ -0.92
CTNNA1-214ENST00000519116 KIF3CO14782 793 aa9.29□□□□□ -0.92
CTNNA1-214ENST00000519116 MSL1Q68DK7 614 aa9.29□□□□□ -0.92
CTNNA1-214ENST00000519116 FLAD1Q8NFF5 587 aa9.29□□□□□ -0.92
CTNNA1-214ENST00000519116 AKAP12Q02952 1782 aa9.29□□□□□ -0.92
CTNNA1-214ENST00000519116 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.28□□□□□ -0.92
CTNNA1-214ENST00000519116 DCBLD2Q96PD2 775 aa9.28□□□□□ -0.92
CTNNA1-214ENST00000519116 PHF12Q96QT6 1004 aa9.28□□□□□ -0.92
CTNNA1-214ENST00000519116 WNK3Q9BYP7 1800 aa9.28□□□□□ -0.92
CTNNA1-214ENST00000519116 DNAJC5GQ8N7S2 189 aa9.27□□□□□ -0.93
CTNNA1-214ENST00000519116 NSD2O96028 1365 aa9.26□□□□□ -0.93
CTNNA1-214ENST00000519116 USP47Q96K76 1375 aa9.26□□□□□ -0.93
CTNNA1-214ENST00000519116 TOMM70O94826 608 aa9.26□□□□□ -0.93
CTNNA1-214ENST00000519116 NME9Q86XW9 330 aa9.26□□□□□ -0.93
CTNNA1-214ENST00000519116 ZCRB1Q8TBF4 217 aaKnown RBP9.26□□□□□ -0.93
CTNNA1-214ENST00000519116 IP6K1Q92551 441 aa9.26□□□□□ -0.93
CTNNA1-214ENST00000519116 IGSF1Q8N6C5 1336 aa9.26□□□□□ -0.93
CTNNA1-214ENST00000519116 QRICH2Q9H0J4 1663 aa9.26□□□□□ -0.93
CTNNA1-214ENST00000519116 KIAA1210Q9ULL0 1709 aa9.25□□□□□ -0.93
CTNNA1-214ENST00000519116 LTV1Q96GA3 475 aaPredicted RBP9.24□□□□□ -0.93
CTNNA1-214ENST00000519116 COL24A1Q17RW2 1714 aa9.24□□□□□ -0.93
CTNNA1-214ENST00000519116 BTAF1O14981 1849 aa9.24□□□□□ -0.93
CTNNA1-214ENST00000519116 SBNO2Q9Y2G9 1366 aa9.24□□□□□ -0.93
CTNNA1-214ENST00000519116 HDGFL2Q7Z4V5 671 aaPredicted RBP9.23□□□□□ -0.93
CTNNA1-214ENST00000519116 QSER1Q2KHR3 1735 aa9.22□□□□□ -0.93
CTNNA1-214ENST00000519116 COL13A1Q5TAT6 717 aaPredicted RBP9.22□□□□□ -0.93
CTNNA1-214ENST00000519116 KLRG1Q96E93 195 aa9.22□□□□□ -0.93
CTNNA1-214ENST00000519116 AK7Q96M32 723 aa9.22□□□□□ -0.93
CTNNA1-214ENST00000519116 WWC3Q9ULE0 1092 aa9.22□□□□□ -0.93
CTNNA1-214ENST00000519116 CGNL1Q0VF96 1302 aa9.22□□□□□ -0.93
CTNNA1-214ENST00000519116 PRELPP51888 382 aa9.21□□□□□ -0.94
CTNNA1-214ENST00000519116 TNS4Q8IZW8 715 aa9.21□□□□□ -0.94
CTNNA1-214ENST00000519116 JMYQ8N9B5 988 aa9.21□□□□□ -0.94
CTNNA1-214ENST00000519116 RBM46Q8TBY0 533 aaKnown RBP9.21□□□□□ -0.94
CTNNA1-214ENST00000519116 TMC1Q8TDI8 760 aa9.21□□□□□ -0.94
CTNNA1-214ENST00000519116 EDC4Q6P2E9 1401 aaKnown RBP9.21□□□□□ -0.94
CTNNA1-214ENST00000519116 NSD3Q9BZ95 1437 aa9.21□□□□□ -0.94
CTNNA1-214ENST00000519116 POTEB2H3BUK9 544 aa9.2□□□□□ -0.94
CTNNA1-214ENST00000519116 AMPHP49418 695 aa9.2□□□□□ -0.94
CTNNA1-214ENST00000519116 SMARCC1Q92922 1105 aaPredicted RBP9.2□□□□□ -0.94
CTNNA1-214ENST00000519116 TERF2IPQ9NYB0 399 aa9.2□□□□□ -0.94
CTNNA1-214ENST00000519116 ROCK2O75116 1388 aaKnown RBP9.2□□□□□ -0.94
CTNNA1-214ENST00000519116 PALLDQ8WX93 1383 aa9.2□□□□□ -0.94
CTNNA1-214ENST00000519116 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.19□□□□□ -0.94
CTNNA1-214ENST00000519116 PHF14O94880 888 aa9.19□□□□□ -0.94
CTNNA1-214ENST00000519116 SSFA2P28290 1259 aa9.19□□□□□ -0.94
CTNNA1-214ENST00000519116 HOXC9P31274 260 aa9.19□□□□□ -0.94
CTNNA1-214ENST00000519116 FSTL1Q12841 308 aa9.19□□□□□ -0.94
CTNNA1-214ENST00000519116 C16orf71Q8IYS4 520 aaPredicted RBP9.19□□□□□ -0.94
CTNNA1-214ENST00000519116 RAPGEF4Q8WZA2 1011 aa9.19□□□□□ -0.94
CTNNA1-214ENST00000519116 L3MBTL2Q969R5 705 aa9.19□□□□□ -0.94
CTNNA1-214ENST00000519116 MEGF6O75095 1541 aa9.18□□□□□ -0.94
CTNNA1-214ENST00000519116 TGFB2P61812 414 aa9.18□□□□□ -0.94
CTNNA1-214ENST00000519116 MAP3K19Q56UN5 1328 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms