RNA–Protein interactions for RNA: ENST00000518882.2

PCDHGA11-202, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDHGA11, Length 2,263 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-202ENST00000518882 AGLP35573 1532 aa20.5■□□□□ 0.87
PCDHGA11-202ENST00000518882 PRR36Q9H6K5 1346 aa20.5■□□□□ 0.87
PCDHGA11-202ENST00000518882 SMARCA5O60264 1052 aaPredicted RBP20.5■□□□□ 0.87
PCDHGA11-202ENST00000518882 PTMSP20962 102 aa20.49■□□□□ 0.87
PCDHGA11-202ENST00000518882 RABEP1Q15276 862 aa20.49■□□□□ 0.87
PCDHGA11-202ENST00000518882 RTL1A6NKG5 1358 aa20.49■□□□□ 0.87
PCDHGA11-202ENST00000518882 CHL1O00533 1208 aa20.48■□□□□ 0.87
PCDHGA11-202ENST00000518882 BAG4O95429 457 aaKnown RBP20.48■□□□□ 0.87
PCDHGA11-202ENST00000518882 APBB1O00213 710 aa20.48■□□□□ 0.87
PCDHGA11-202ENST00000518882 SDSP20132 328 aa20.48■□□□□ 0.87
PCDHGA11-202ENST00000518882 MLECQ14165 292 aa20.48■□□□□ 0.87
PCDHGA11-202ENST00000518882 MEIS3Q99687 375 aa20.47■□□□□ 0.87
PCDHGA11-202ENST00000518882 PEAK1Q9H792 1746 aa20.47■□□□□ 0.87
PCDHGA11-202ENST00000518882 RPAP2Q8IXW5 612 aaPredicted RBP20.47■□□□□ 0.87
PCDHGA11-202ENST00000518882 ESPNB1AK53 854 aa20.46■□□□□ 0.87
PCDHGA11-202ENST00000518882 PPP6R1Q9UPN7 881 aa20.46■□□□□ 0.87
PCDHGA11-202ENST00000518882 RGPD1P0DJD0 1748 aa20.45■□□□□ 0.86
PCDHGA11-202ENST00000518882 PKP1Q13835 747 aa20.45■□□□□ 0.86
PCDHGA11-202ENST00000518882 TECPR2O15040 1411 aa20.45■□□□□ 0.86
PCDHGA11-202ENST00000518882 KIAA0232Q92628 1395 aa20.44■□□□□ 0.86
PCDHGA11-202ENST00000518882 FAM69CQ0P6D2 419 aa20.44■□□□□ 0.86
PCDHGA11-202ENST00000518882 KLHL40Q2TBA0 621 aa20.44■□□□□ 0.86
PCDHGA11-202ENST00000518882 NAP1L5Q96NT1 182 aaPredicted RBP20.44■□□□□ 0.86
PCDHGA11-202ENST00000518882 GOLGA6L22H0YM25 854 aa20.43■□□□□ 0.86
PCDHGA11-202ENST00000518882 DDX49Q9Y6V7 483 aaKnown RBP20.43■□□□□ 0.86
PCDHGA11-202ENST00000518882 PTPRCP08575 1304 aa20.43■□□□□ 0.86
PCDHGA11-202ENST00000518882 CYP2E1P05181 493 aaPredicted RBP20.43■□□□□ 0.86
PCDHGA11-202ENST00000518882 HSP90AB2PQ58FF8 381 aa20.42■□□□□ 0.86
PCDHGA11-202ENST00000518882 CRB1P82279 1406 aa20.42■□□□□ 0.86
PCDHGA11-202ENST00000518882 TTC21BQ7Z4L5 1316 aa20.42■□□□□ 0.86
PCDHGA11-202ENST00000518882 RIMS1Q86UR5 1692 aaKnown RBP20.42■□□□□ 0.86
PCDHGA11-202ENST00000518882 MCTP1Q6DN14 999 aa20.42■□□□□ 0.86
PCDHGA11-202ENST00000518882 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.42■□□□□ 0.86
PCDHGA11-202ENST00000518882 MIS18AQ9NYP9 233 aa20.42■□□□□ 0.86
PCDHGA11-202ENST00000518882 DIP2BQ9P265 1576 aa20.42■□□□□ 0.86
PCDHGA11-202ENST00000518882 OVOS2A0A0J9YW53 1432 aa20.41■□□□□ 0.86
PCDHGA11-202ENST00000518882 OVOS2Q6IE36 1432 aa20.41■□□□□ 0.86
PCDHGA11-202ENST00000518882 NALCNQ8IZF0 1738 aa20.41■□□□□ 0.86
PCDHGA11-202ENST00000518882 SLC4A2P04920 1241 aa20.41■□□□□ 0.86
PCDHGA11-202ENST00000518882 HAP1P54257 671 aaPredicted RBP20.41■□□□□ 0.86
PCDHGA11-202ENST00000518882 TRIM44Q96DX7 344 aaPredicted RBP20.41■□□□□ 0.86
PCDHGA11-202ENST00000518882 SIRT1Q96EB6 747 aa20.41■□□□□ 0.86
PCDHGA11-202ENST00000518882 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.41■□□□□ 0.86
PCDHGA11-202ENST00000518882 ROBO2Q9HCK4 1378 aa20.4■□□□□ 0.86
PCDHGA11-202ENST00000518882 TOPAZ1Q8N9V7 1692 aa20.4■□□□□ 0.86
PCDHGA11-202ENST00000518882 CYB5RLQ6IPT4 315 aa20.4■□□□□ 0.86
PCDHGA11-202ENST00000518882 ZGPATQ8N5A5 531 aaKnown RBP20.4■□□□□ 0.86
PCDHGA11-202ENST00000518882 IBTKQ9P2D0 1353 aaPredicted RBP20.4■□□□□ 0.86
PCDHGA11-202ENST00000518882 NUCB2P80303 420 aa20.39■□□□□ 0.85
PCDHGA11-202ENST00000518882 G2E3Q7L622 706 aa20.39■□□□□ 0.85
PCDHGA11-202ENST00000518882 ACEP12821 1306 aa20.39■□□□□ 0.85
PCDHGA11-202ENST00000518882 NUTM2FA1L443 756 aa20.38■□□□□ 0.85
PCDHGA11-202ENST00000518882 LMBRD1Q9NUN5 540 aa20.38■□□□□ 0.85
PCDHGA11-202ENST00000518882 F6X3S4 739 aa20.38■□□□□ 0.85
PCDHGA11-202ENST00000518882 FOXO3O43524 673 aa20.38■□□□□ 0.85
PCDHGA11-202ENST00000518882 NASPP49321 788 aaPredicted RBP20.38■□□□□ 0.85
PCDHGA11-202ENST00000518882 CASC1Q6TDU7 716 aa20.38■□□□□ 0.85
PCDHGA11-202ENST00000518882 TUBGCP6Q96RT7 1819 aa20.37■□□□□ 0.85
PCDHGA11-202ENST00000518882 SOX12O15370 315 aa20.37■□□□□ 0.85
PCDHGA11-202ENST00000518882 FMN2Q9NZ56 1722 aa20.36■□□□□ 0.85
PCDHGA11-202ENST00000518882 SLC4A10Q6U841 1118 aa20.36■□□□□ 0.85
PCDHGA11-202ENST00000518882 ST18O60284 1047 aa20.36■□□□□ 0.85
PCDHGA11-202ENST00000518882 PPP1R9BQ96SB3 815 aa20.36■□□□□ 0.85
PCDHGA11-202ENST00000518882 ZDHHC9Q9Y397 364 aa20.36■□□□□ 0.85
PCDHGA11-202ENST00000518882 REC8O95072 547 aa20.35■□□□□ 0.85
PCDHGA11-202ENST00000518882 CCDC173Q0VFZ6 552 aa20.35■□□□□ 0.85
PCDHGA11-202ENST00000518882 CAVIN1Q6NZI2 390 aaKnown RBP20.35■□□□□ 0.85
PCDHGA11-202ENST00000518882 USP6P35125 1406 aa20.35■□□□□ 0.85
PCDHGA11-202ENST00000518882 ERC2O15083 957 aa20.34■□□□□ 0.85
PCDHGA11-202ENST00000518882 PDE1AP54750 535 aa20.34■□□□□ 0.85
PCDHGA11-202ENST00000518882 UBE2Q2Q8WVN8 375 aa20.34■□□□□ 0.85
PCDHGA11-202ENST00000518882 MAP3K19Q56UN5 1328 aa20.34■□□□□ 0.85
PCDHGA11-202ENST00000518882 ZNF445P59923 1031 aa20.34■□□□□ 0.85
PCDHGA11-202ENST00000518882 CWC22Q9HCG8 908 aaKnown RBP20.34■□□□□ 0.85
PCDHGA11-202ENST00000518882 NCLP19338 710 aaKnown RBP20.33■□□□□ 0.85
PCDHGA11-202ENST00000518882 MTHFSDQ2M296 383 aaKnown RBP20.33■□□□□ 0.85
PCDHGA11-202ENST00000518882 ZSCAN23Q3MJ62 389 aa20.33■□□□□ 0.85
PCDHGA11-202ENST00000518882 TSHZ3Q63HK5 1081 aa20.33■□□□□ 0.85
PCDHGA11-202ENST00000518882 CHAMP1Q96JM3 812 aa20.33■□□□□ 0.85
PCDHGA11-202ENST00000518882 OSBPL3Q9H4L5 887 aa20.33■□□□□ 0.85
PCDHGA11-202ENST00000518882 HMMRO75330 724 aa20.33■□□□□ 0.84
PCDHGA11-202ENST00000518882 TSPYL4Q9UJ04 414 aa20.32■□□□□ 0.84
PCDHGA11-202ENST00000518882 USP31Q70CQ4 1352 aa20.32■□□□□ 0.84
PCDHGA11-202ENST00000518882 UBR1Q8IWV7 1749 aa20.32■□□□□ 0.84
PCDHGA11-202ENST00000518882 EXOC6BQ9Y2D4 811 aa20.32■□□□□ 0.84
PCDHGA11-202ENST00000518882 ADAMTS13Q76LX8 1427 aa20.31■□□□□ 0.84
PCDHGA11-202ENST00000518882 PLEKHG3A1L390 1219 aa20.31■□□□□ 0.84
PCDHGA11-202ENST00000518882 GPT2Q8TD30 523 aa20.3■□□□□ 0.84
PCDHGA11-202ENST00000518882 PRPF40AO75400 957 aaKnown RBP20.3■□□□□ 0.84
PCDHGA11-202ENST00000518882 CCT4P50991 539 aaKnown RBP20.3■□□□□ 0.84
PCDHGA11-202ENST00000518882 SALL3Q9BXA9 1300 aa20.3■□□□□ 0.84
PCDHGA11-202ENST00000518882 ARHGEF10O15013 1369 aa20.3■□□□□ 0.84
PCDHGA11-202ENST00000518882 SSH2Q76I76 1423 aa20.29■□□□□ 0.84
PCDHGA11-202ENST00000518882 TMEM2Q9UHN6 1383 aa20.29■□□□□ 0.84
PCDHGA11-202ENST00000518882 RBM27Q9P2N5 1060 aaKnown RBP20.29■□□□□ 0.84
PCDHGA11-202ENST00000518882 XRN1Q8IZH2 1706 aaKnown RBP20.29■□□□□ 0.84
PCDHGA11-202ENST00000518882 FAM208AQ9UK61 1670 aaKnown RBP20.29■□□□□ 0.84
PCDHGA11-202ENST00000518882 RTF1Q92541 710 aaKnown RBP20.28■□□□□ 0.84
PCDHGA11-202ENST00000518882 CEP170BQ9Y4F5 1589 aaPredicted RBP20.28■□□□□ 0.84
PCDHGA11-202ENST00000518882 GNAI2P04899 355 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms