RNA–Protein interactions for RNA: ENST00000518716.1

PABPC1-207, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-207ENST00000518716 IDI1Q13907 227 aa9.61□□□□□ -0.87
PABPC1-207ENST00000518716 FCF1Q9Y324 198 aaKnown RBP9.61□□□□□ -0.87
PABPC1-207ENST00000518716 CEP152O94986 1710 aa9.61□□□□□ -0.87
PABPC1-207ENST00000518716 DUOX2Q9NRD8 1548 aa9.61□□□□□ -0.87
PABPC1-207ENST00000518716 KDM5AP29375 1690 aaKnown RBP9.61□□□□□ -0.87
PABPC1-207ENST00000518716 PROSER2Q86WR7 435 aaPredicted RBP9.6□□□□□ -0.87
PABPC1-207ENST00000518716 ATP13A2Q9NQ11 1180 aa9.6□□□□□ -0.87
PABPC1-207ENST00000518716 SLAIN2Q9P270 581 aa9.6□□□□□ -0.87
PABPC1-207ENST00000518716 JCADQ9P266 1359 aa9.6□□□□□ -0.87
PABPC1-207ENST00000518716 PIK3C2BO00750 1634 aa9.6□□□□□ -0.87
PABPC1-207ENST00000518716 LRRC9Q6ZRR7 1453 aa9.59□□□□□ -0.87
PABPC1-207ENST00000518716 NWD1Q149M9 1564 aa9.59□□□□□ -0.87
PABPC1-207ENST00000518716 CD2BP2O95400 341 aaKnown RBP9.59□□□□□ -0.87
PABPC1-207ENST00000518716 SLC26A8Q96RN1 970 aa9.59□□□□□ -0.87
PABPC1-207ENST00000518716 SETD1AO15047 1707 aaKnown RBP9.59□□□□□ -0.87
PABPC1-207ENST00000518716 NKTRP30414 1462 aaKnown RBP9.59□□□□□ -0.87
PABPC1-207ENST00000518716 ERBINQ96RT1 1412 aa9.58□□□□□ -0.88
PABPC1-207ENST00000518716 LMTK2Q8IWU2 1503 aa9.58□□□□□ -0.88
PABPC1-207ENST00000518716 WDR70Q9NW82 654 aa9.58□□□□□ -0.88
PABPC1-207ENST00000518716 NOS1P29475 1434 aa9.57□□□□□ -0.88
PABPC1-207ENST00000518716 MYOM3Q5VTT5 1437 aa9.57□□□□□ -0.88
PABPC1-207ENST00000518716 EFCAB6Q5THR3 1501 aa9.57□□□□□ -0.88
PABPC1-207ENST00000518716 SMPD1P17405 629 aa9.57□□□□□ -0.88
PABPC1-207ENST00000518716 MLLT3P42568 568 aaPredicted RBP9.57□□□□□ -0.88
PABPC1-207ENST00000518716 KANK4Q5T7N3 995 aaPredicted RBP9.57□□□□□ -0.88
PABPC1-207ENST00000518716 TRIM47Q96LD4 638 aa9.57□□□□□ -0.88
PABPC1-207ENST00000518716 KIF15Q9NS87 1388 aa9.57□□□□□ -0.88
PABPC1-207ENST00000518716 SRCAPQ6ZRS2 3230 aa9.57□□□□□ -0.88
PABPC1-207ENST00000518716 ABCC5O15440 1437 aa9.56□□□□□ -0.88
PABPC1-207ENST00000518716 LRP6O75581 1613 aa9.56□□□□□ -0.88
PABPC1-207ENST00000518716 COL16A1Q07092 1604 aaPredicted RBP9.56□□□□□ -0.88
PABPC1-207ENST00000518716 TTC24A2A3L6 582 aaPredicted RBP9.56□□□□□ -0.88
PABPC1-207ENST00000518716 BBXQ8WY36 941 aaPredicted RBP9.56□□□□□ -0.88
PABPC1-207ENST00000518716 FGD6Q6ZV73 1430 aa9.56□□□□□ -0.88
PABPC1-207ENST00000518716 NCOA3Q9Y6Q9 1424 aa9.56□□□□□ -0.88
PABPC1-207ENST00000518716 MSH6P52701 1360 aa9.55□□□□□ -0.88
PABPC1-207ENST00000518716 THAP11Q96EK4 314 aa9.55□□□□□ -0.88
PABPC1-207ENST00000518716 ZFYVE9O95405 1425 aa9.55□□□□□ -0.88
PABPC1-207ENST00000518716 SPATA31A6Q5VVP1 1343 aa9.55□□□□□ -0.88
PABPC1-207ENST00000518716 PHLPP1O60346 1717 aa9.54□□□□□ -0.88
PABPC1-207ENST00000518716 LORP23490 312 aaPredicted RBP9.54□□□□□ -0.88
PABPC1-207ENST00000518716 FAM160A2Q8N612 972 aaPredicted RBP9.54□□□□□ -0.88
PABPC1-207ENST00000518716 RRP7BPQ9NSQ0 103 aa9.54□□□□□ -0.88
PABPC1-207ENST00000518716 SLC52A1Q9NWF4 448 aa9.54□□□□□ -0.88
PABPC1-207ENST00000518716 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.53□□□□□ -0.88
PABPC1-207ENST00000518716 ZNF772Q68DY9 489 aaPredicted RBP9.53□□□□□ -0.88
PABPC1-207ENST00000518716 TBX22Q9Y458 520 aa9.53□□□□□ -0.88
PABPC1-207ENST00000518716 CHD2O14647 1828 aaKnown RBP9.53□□□□□ -0.88
PABPC1-207ENST00000518716 CDK12Q9NYV4 1490 aaPredicted RBP9.53□□□□□ -0.88
PABPC1-207ENST00000518716 PLEKHG1Q9ULL1 1385 aa9.52□□□□□ -0.88
PABPC1-207ENST00000518716 ADGRB3O60242 1522 aa9.52□□□□□ -0.88
PABPC1-207ENST00000518716 PRDM9Q9NQV7 894 aa9.52□□□□□ -0.89
PABPC1-207ENST00000518716 AHDC1Q5TGY3 1603 aaPredicted RBP9.52□□□□□ -0.89
PABPC1-207ENST00000518716 VPS8Q8N3P4 1428 aa9.51□□□□□ -0.89
PABPC1-207ENST00000518716 MORN1Q5T089 497 aa9.51□□□□□ -0.89
PABPC1-207ENST00000518716 SENP2Q9HC62 589 aa9.51□□□□□ -0.89
PABPC1-207ENST00000518716 KANK1Q14678 1352 aa9.5□□□□□ -0.89
PABPC1-207ENST00000518716 ADAMTS13Q76LX8 1427 aa9.5□□□□□ -0.89
PABPC1-207ENST00000518716 J3QL48 77 aa9.5□□□□□ -0.89
PABPC1-207ENST00000518716 RXRBP28702 533 aa9.5□□□□□ -0.89
PABPC1-207ENST00000518716 C19orf44Q9H6X5 657 aa9.5□□□□□ -0.89
PABPC1-207ENST00000518716 DIP2AQ14689 1571 aa9.5□□□□□ -0.89
PABPC1-207ENST00000518716 DAPK1P53355 1430 aa9.49□□□□□ -0.89
PABPC1-207ENST00000518716 CROCC2H7BZ55 1655 aa9.49□□□□□ -0.89
PABPC1-207ENST00000518716 SHPRHQ149N8 1683 aa9.49□□□□□ -0.89
PABPC1-207ENST00000518716 WNT7AO00755 349 aa9.49□□□□□ -0.89
PABPC1-207ENST00000518716 SPRYD3Q8NCJ5 442 aa9.49□□□□□ -0.89
PABPC1-207ENST00000518716 SNIP1Q8TAD8 396 aaKnown RBP9.49□□□□□ -0.89
PABPC1-207ENST00000518716 TRIM52Q96A61 297 aa9.49□□□□□ -0.89
PABPC1-207ENST00000518716 RPRD2Q5VT52 1461 aaKnown RBP9.48□□□□□ -0.89
PABPC1-207ENST00000518716 BRINP3Q76B58 766 aa9.48□□□□□ -0.89
PABPC1-207ENST00000518716 PXYLP1Q8TE99 480 aa9.48□□□□□ -0.89
PABPC1-207ENST00000518716 PIK3R4Q99570 1358 aa9.48□□□□□ -0.89
PABPC1-207ENST00000518716 RIMS2Q9UQ26 1411 aa9.48□□□□□ -0.89
PABPC1-207ENST00000518716 TMEM131LA2VDJ0 1609 aa9.47□□□□□ -0.89
PABPC1-207ENST00000518716 FAM181BA6NEQ2 426 aa9.47□□□□□ -0.89
PABPC1-207ENST00000518716 GMPRP36959 345 aa9.47□□□□□ -0.89
PABPC1-207ENST00000518716 HPS1Q92902 700 aa9.47□□□□□ -0.89
PABPC1-207ENST00000518716 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.47□□□□□ -0.89
PABPC1-207ENST00000518716 SETD5Q9C0A6 1442 aa9.47□□□□□ -0.89
PABPC1-207ENST00000518716 FUT2Q10981 343 aa9.46□□□□□ -0.9
PABPC1-207ENST00000518716 MRGPRX2Q96LB1 330 aa9.46□□□□□ -0.9
PABPC1-207ENST00000518716 SLC27A5Q9Y2P5 690 aa9.46□□□□□ -0.9
PABPC1-207ENST00000518716 ANKRD30AQ9BXX3 1397 aa9.46□□□□□ -0.9
PABPC1-207ENST00000518716 PTPN23Q9H3S7 1636 aa9.45□□□□□ -0.9
PABPC1-207ENST00000518716 MYO5BQ9ULV0 1848 aa9.45□□□□□ -0.9
PABPC1-207ENST00000518716 FMNL1O95466 1100 aaPredicted RBP9.45□□□□□ -0.9
PABPC1-207ENST00000518716 MEX3CQ5U5Q3 659 aaKnown RBP9.45□□□□□ -0.9
PABPC1-207ENST00000518716 ZSCAN1Q8NBB4 408 aa9.45□□□□□ -0.9
PABPC1-207ENST00000518716 KIFC2Q96AC6 838 aa9.45□□□□□ -0.9
PABPC1-207ENST00000518716 PTPRUQ92729 1446 aa9.45□□□□□ -0.9
PABPC1-207ENST00000518716 ADGRL2O95490 1459 aa9.45□□□□□ -0.9
PABPC1-207ENST00000518716 NUTM2FA1L443 756 aa9.44□□□□□ -0.9
PABPC1-207ENST00000518716 ZBTB24O43167 697 aaPredicted RBP9.44□□□□□ -0.9
PABPC1-207ENST00000518716 ATF3P18847 181 aa9.44□□□□□ -0.9
PABPC1-207ENST00000518716 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.44□□□□□ -0.9
PABPC1-207ENST00000518716 BCANQ96GW7 911 aa9.44□□□□□ -0.9
PABPC1-207ENST00000518716 AFF2P51816 1311 aa9.44□□□□□ -0.9
PABPC1-207ENST00000518716 DCCP43146 1447 aa9.44□□□□□ -0.9
PABPC1-207ENST00000518716 RGS12O14924 1447 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms