RNA–Protein interactions for RNA: ENST00000518531.5

TNFRSF10B-203, Transcript of TNF receptor superfamily member 10b, humanhuman

TSL 3

Gene TNFRSF10B, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF10B-203ENST00000518531 SYTL4Q96C24 671 aaPredicted RBP22.28■■□□□ 1.16
TNFRSF10B-203ENST00000518531 LY75O60449 1722 aa22.28■■□□□ 1.16
TNFRSF10B-203ENST00000518531 PRIM1P49642 420 aaKnown RBP22.27■■□□□ 1.16
TNFRSF10B-203ENST00000518531 NLGN2Q8NFZ4 835 aa22.27■■□□□ 1.16
TNFRSF10B-203ENST00000518531 SHANK3Q9BYB0 1731 aa22.26■■□□□ 1.15
TNFRSF10B-203ENST00000518531 GIGYF1O75420 1035 aaPredicted RBP22.25■■□□□ 1.15
TNFRSF10B-203ENST00000518531 MAP3K19Q56UN5 1328 aa22.24■■□□□ 1.15
TNFRSF10B-203ENST00000518531 MEGF6O75095 1541 aa22.23■■□□□ 1.15
TNFRSF10B-203ENST00000518531 HOXC9P31274 260 aa22.22■■□□□ 1.15
TNFRSF10B-203ENST00000518531 RGPD2P0DJD1 1756 aa22.22■■□□□ 1.15
TNFRSF10B-203ENST00000518531 ZCRB1Q8TBF4 217 aaKnown RBP22.21■■□□□ 1.15
TNFRSF10B-203ENST00000518531 PUS7Q96PZ0 661 aaKnown RBP22.21■■□□□ 1.15
TNFRSF10B-203ENST00000518531 CCNL1Q9UK58 526 aaPredicted RBP22.21■■□□□ 1.15
TNFRSF10B-203ENST00000518531 FBLN1P23142 703 aa22.2■■□□□ 1.14
TNFRSF10B-203ENST00000518531 COG3Q96JB2 828 aa22.2■■□□□ 1.14
TNFRSF10B-203ENST00000518531 YBX3P16989 372 aaKnown RBP eCLIP22.19■■□□□ 1.14
TNFRSF10B-203ENST00000518531 AMPHP49418 695 aa22.19■■□□□ 1.14
TNFRSF10B-203ENST00000518531 CEP350Q5VT06 3117 aa22.19■■□□□ 1.14
TNFRSF10B-203ENST00000518531 COL23A1Q86Y22 540 aaPredicted RBP22.18■■□□□ 1.14
TNFRSF10B-203ENST00000518531 USP47Q96K76 1375 aa22.17■■□□□ 1.14
TNFRSF10B-203ENST00000518531 MSH5O43196 834 aa22.17■■□□□ 1.14
TNFRSF10B-203ENST00000518531 RTL1A6NKG5 1358 aa22.15■■□□□ 1.14
TNFRSF10B-203ENST00000518531 GRIN3BO60391 1043 aa22.15■■□□□ 1.14
TNFRSF10B-203ENST00000518531 MSL1Q68DK7 614 aa22.15■■□□□ 1.14
TNFRSF10B-203ENST00000518531 NBPF6Q5VWK0 638 aa22.14■■□□□ 1.13
TNFRSF10B-203ENST00000518531 NBPF4Q96M43 638 aa22.14■■□□□ 1.13
TNFRSF10B-203ENST00000518531 TESK2Q96S53 571 aa22.14■■□□□ 1.13
TNFRSF10B-203ENST00000518531 C5P01031 1676 aa22.14■■□□□ 1.13
TNFRSF10B-203ENST00000518531 USHBP1Q8N6Y0 703 aa22.13■■□□□ 1.13
TNFRSF10B-203ENST00000518531 RRS1Q15050 365 aaKnown RBP22.11■■□□□ 1.13
TNFRSF10B-203ENST00000518531 TONSLQ96HA7 1378 aa22.11■■□□□ 1.13
TNFRSF10B-203ENST00000518531 CGNL1Q0VF96 1302 aa22.1■■□□□ 1.13
TNFRSF10B-203ENST00000518531 ATP10DQ9P241 1426 aa22.1■■□□□ 1.13
TNFRSF10B-203ENST00000518531 ST20-MTHFSA0A0A6YYL1 179 aa22.09■■□□□ 1.13
TNFRSF10B-203ENST00000518531 RAPGEF4Q8WZA2 1011 aa22.09■■□□□ 1.13
TNFRSF10B-203ENST00000518531 SMG6Q86US8 1419 aaKnown RBP22.08■■□□□ 1.13
TNFRSF10B-203ENST00000518531 CD2APQ9Y5K6 639 aa22.07■■□□□ 1.12
TNFRSF10B-203ENST00000518531 PALLDQ8WX93 1383 aa22.07■■□□□ 1.12
TNFRSF10B-203ENST00000518531 TAF1LQ8IZX4 1826 aa22.06■■□□□ 1.12
TNFRSF10B-203ENST00000518531 TATP17735 454 aaPredicted RBP22.06■■□□□ 1.12
TNFRSF10B-203ENST00000518531 GGNBP2Q9H3C7 697 aa22.06■■□□□ 1.12
TNFRSF10B-203ENST00000518531 PCDH11XQ9BZA7 1347 aa22.06■■□□□ 1.12
TNFRSF10B-203ENST00000518531 PCDH11YQ9BZA8 1340 aa22.06■■□□□ 1.12
TNFRSF10B-203ENST00000518531 FYB1O15117 783 aa22.05■■□□□ 1.12
TNFRSF10B-203ENST00000518531 IFFO2Q5TF58 517 aa22.05■■□□□ 1.12
TNFRSF10B-203ENST00000518531 C4BP0C0L5 1744 aa22.04■■□□□ 1.12
TNFRSF10B-203ENST00000518531 TOGARAM1Q9Y4F4 1720 aa22.04■■□□□ 1.12
TNFRSF10B-203ENST00000518531 FLAD1Q8NFF5 587 aa22.04■■□□□ 1.12
TNFRSF10B-203ENST00000518531 INSRP06213 1382 aa22.03■■□□□ 1.12
TNFRSF10B-203ENST00000518531 HSP90AB2PQ58FF8 381 aa22.03■■□□□ 1.12
TNFRSF10B-203ENST00000518531 MPRIPQ6WCQ1 1025 aa22.03■■□□□ 1.12
TNFRSF10B-203ENST00000518531 ADCY9O60503 1353 aa22.02■■□□□ 1.12
TNFRSF10B-203ENST00000518531 AMIGO3Q86WK7 504 aa22.02■■□□□ 1.12
TNFRSF10B-203ENST00000518531 CYP27B1O15528 508 aa22.01■■□□□ 1.11
TNFRSF10B-203ENST00000518531 GPBP1L1Q9HC44 474 aaPredicted RBP22.01■■□□□ 1.11
TNFRSF10B-203ENST00000518531 FLT4P35916 1363 aa22■■□□□ 1.11
TNFRSF10B-203ENST00000518531 SLC24A1O60721 1099 aa22■■□□□ 1.11
TNFRSF10B-203ENST00000518531 HMGB2P26583 209 aaKnown RBP22■■□□□ 1.11
TNFRSF10B-203ENST00000518531 ITGB4P16144 1822 aa21.99■■□□□ 1.11
TNFRSF10B-203ENST00000518531 AK7Q96M32 723 aa21.99■■□□□ 1.11
TNFRSF10B-203ENST00000518531 KIF20BQ96Q89 1820 aa21.99■■□□□ 1.11
TNFRSF10B-203ENST00000518531 PKD1L3Q7Z443 1732 aa21.98■■□□□ 1.11
TNFRSF10B-203ENST00000518531 SMIM5Q71RC9 77 aa21.98■■□□□ 1.11
TNFRSF10B-203ENST00000518531 ZNF526Q8TF50 670 aaPredicted RBP21.98■■□□□ 1.11
TNFRSF10B-203ENST00000518531 UBR3Q6ZT12 1888 aa21.98■■□□□ 1.11
TNFRSF10B-203ENST00000518531 KIF24Q5T7B8 1368 aa21.98■■□□□ 1.11
TNFRSF10B-203ENST00000518531 PHF14O94880 888 aa21.97■■□□□ 1.11
TNFRSF10B-203ENST00000518531 SMARCC1Q92922 1105 aaPredicted RBP21.97■■□□□ 1.11
TNFRSF10B-203ENST00000518531 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.96■■□□□ 1.11
TNFRSF10B-203ENST00000518531 WWC3Q9ULE0 1092 aa21.96■■□□□ 1.11
TNFRSF10B-203ENST00000518531 IGSF1Q8N6C5 1336 aa21.96■■□□□ 1.11
TNFRSF10B-203ENST00000518531 PIGBQ92521 554 aa21.95■■□□□ 1.1
TNFRSF10B-203ENST00000518531 TMF1P82094 1093 aa21.94■■□□□ 1.1
TNFRSF10B-203ENST00000518531 NCAPD2Q15021 1401 aa21.94■■□□□ 1.1
TNFRSF10B-203ENST00000518531 NSD3Q9BZ95 1437 aa21.94■■□□□ 1.1
TNFRSF10B-203ENST00000518531 MAP2P11137 1827 aaKnown RBP21.94■■□□□ 1.1
TNFRSF10B-203ENST00000518531 HSPA6P17066 643 aa21.93■■□□□ 1.1
TNFRSF10B-203ENST00000518531 LINC00116Q8NCU8 138 aa21.92■■□□□ 1.1
TNFRSF10B-203ENST00000518531 EMILIN1Q9Y6C2 1016 aa21.92■■□□□ 1.1
TNFRSF10B-203ENST00000518531 SSFA2P28290 1259 aa21.91■■□□□ 1.1
TNFRSF10B-203ENST00000518531 NKX1-1Q15270 411 aaPredicted RBP21.91■■□□□ 1.1
TNFRSF10B-203ENST00000518531 LOC102724428A0A0B4J2F2 783 aa21.9■■□□□ 1.1
TNFRSF10B-203ENST00000518531 SIK1P57059 783 aa21.9■■□□□ 1.1
TNFRSF10B-203ENST00000518531 ANKRD26Q9UPS8 1709 aa21.89■■□□□ 1.09
TNFRSF10B-203ENST00000518531 CARD14Q9BXL6 1004 aa21.88■■□□□ 1.09
TNFRSF10B-203ENST00000518531 SPG7Q9UQ90 795 aa21.88■■□□□ 1.09
TNFRSF10B-203ENST00000518531 CICQ96RK0 1608 aaPredicted RBP21.88■■□□□ 1.09
TNFRSF10B-203ENST00000518531 GNPATO15228 680 aa21.87■■□□□ 1.09
TNFRSF10B-203ENST00000518531 ITPK1Q13572 414 aa21.87■■□□□ 1.09
TNFRSF10B-203ENST00000518531 PPM1GO15355 546 aaPredicted RBP21.86■■□□□ 1.09
TNFRSF10B-203ENST00000518531 TMOD3Q9NYL9 352 aa21.86■■□□□ 1.09
TNFRSF10B-203ENST00000518531 ASAP1Q9ULH1 1129 aa21.86■■□□□ 1.09
TNFRSF10B-203ENST00000518531 KIF3CO14782 793 aa21.85■■□□□ 1.09
TNFRSF10B-203ENST00000518531 CDCA8Q53HL2 280 aa21.84■■□□□ 1.09
TNFRSF10B-203ENST00000518531 PXDNLA1KZ92 1463 aa21.83■■□□□ 1.09
TNFRSF10B-203ENST00000518531 MMP10P09238 476 aa21.83■■□□□ 1.09
TNFRSF10B-203ENST00000518531 ATP6V1AP38606 617 aa21.83■■□□□ 1.09
TNFRSF10B-203ENST00000518531 EYA1Q99502 592 aa21.83■■□□□ 1.09
TNFRSF10B-203ENST00000518531 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.83■■□□□ 1.09
TNFRSF10B-203ENST00000518531 KIAA1551Q9HCM1 1747 aa21.83■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms