RNA–Protein interactions for RNA: ENST00000518531.5

TNFRSF10B-203, Transcript of TNF receptor superfamily member 10b, humanhuman

TSL 3

Gene TNFRSF10B, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF10B-203ENST00000518531 NISCHQ9Y2I1 1504 aa39.98■■■■□ 3.99
TNFRSF10B-203ENST00000518531 ABCC9O60706 1549 aa36.4■■■■□ 3.42
TNFRSF10B-203ENST00000518531 CCDC180Q9P1Z9 1646 aa36.03■■■■□ 3.36
TNFRSF10B-203ENST00000518531 DNAJC5BQ9UF47 199 aa34.48■■■■□ 3.11
TNFRSF10B-203ENST00000518531 RB1CC1Q8TDY2 1594 aa34.47■■■■□ 3.11
TNFRSF10B-203ENST00000518531 NACADO15069 1562 aa34.15■■■■□ 3.06
TNFRSF10B-203ENST00000518531 DCAF8L2P0C7V8 631 aa33.85■■■■□ 3.01
TNFRSF10B-203ENST00000518531 PABPN1Q86U42 306 aaKnown RBP eCLIP33.82■■■■□ 3
TNFRSF10B-203ENST00000518531 UNC13AQ9UPW8 1703 aa33.7■■■□□ 2.99
TNFRSF10B-203ENST00000518531 MYO15BQ96JP2 1530 aa33.55■■■□□ 2.96
TNFRSF10B-203ENST00000518531 BICRAQ9NZM4 1560 aa33.51■■■□□ 2.96
TNFRSF10B-203ENST00000518531 ZCCHC6Q5VYS8 1495 aaKnown RBP33.07■■■□□ 2.88
TNFRSF10B-203ENST00000518531 SHROOM4Q9ULL8 1493 aa32.99■■■□□ 2.87
TNFRSF10B-203ENST00000518531 DCAF1Q9Y4B6 1507 aa32.99■■■□□ 2.87
TNFRSF10B-203ENST00000518531 CC2D2AQ9P2K1 1620 aa32.86■■■□□ 2.85
TNFRSF10B-203ENST00000518531 CECR2Q9BXF3 1484 aa32.83■■■□□ 2.85
TNFRSF10B-203ENST00000518531 SCRIBQ14160 1630 aa32.83■■■□□ 2.85
TNFRSF10B-203ENST00000518531 EIF4G1Q04637 1599 aaKnown RBP32.7■■■□□ 2.83
TNFRSF10B-203ENST00000518531 DNAJC5Q9H3Z4 198 aa31.9■■■□□ 2.7
TNFRSF10B-203ENST00000518531 NCAPD3P42695 1498 aa31.52■■■□□ 2.64
TNFRSF10B-203ENST00000518531 CUX2O14529 1486 aa31.51■■■□□ 2.63
TNFRSF10B-203ENST00000518531 ERCC6Q03468 1493 aa31.45■■■□□ 2.62
TNFRSF10B-203ENST00000518531 ATAD2BQ9ULI0 1458 aa31.39■■■□□ 2.62
TNFRSF10B-203ENST00000518531 SMARCA2P51531 1590 aa31.28■■■□□ 2.6
TNFRSF10B-203ENST00000518531 SMARCA4P51532 1647 aa31.27■■■□□ 2.6
TNFRSF10B-203ENST00000518531 HMGXB3Q12766 1538 aa31.27■■■□□ 2.6
TNFRSF10B-203ENST00000518531 NESP48681 1621 aa31.18■■■□□ 2.58
TNFRSF10B-203ENST00000518531 BAZ1BQ9UIG0 1483 aaKnown RBP31.06■■■□□ 2.56
TNFRSF10B-203ENST00000518531 BAZ1AQ9NRL2 1556 aaPredicted RBP31.05■■■□□ 2.56
TNFRSF10B-203ENST00000518531 PEG3Q9GZU2 1588 aa30.96■■■□□ 2.55
TNFRSF10B-203ENST00000518531 THOC2Q8NI27 1593 aaKnown RBP30.95■■■□□ 2.54
TNFRSF10B-203ENST00000518531 LAMC3Q9Y6N6 1575 aa30.88■■■□□ 2.53
TNFRSF10B-203ENST00000518531 MROH2BQ7Z745 1585 aa30.82■■■□□ 2.52
TNFRSF10B-203ENST00000518531 KIF21AQ7Z4S6 1674 aa30.76■■■□□ 2.51
TNFRSF10B-203ENST00000518531 PDS5BQ9NTI5 1447 aa30.7■■■□□ 2.5
TNFRSF10B-203ENST00000518531 CADPSQ9ULU8 1353 aa30.54■■■□□ 2.48
TNFRSF10B-203ENST00000518531 MRC2Q9UBG0 1479 aa30.48■■■□□ 2.47
TNFRSF10B-203ENST00000518531 WIZO95785 1651 aa30.42■■■□□ 2.46
TNFRSF10B-203ENST00000518531 WDR62O43379 1518 aa30.42■■■□□ 2.46
TNFRSF10B-203ENST00000518531 TRIM41Q8WV44 630 aa30.35■■■□□ 2.45
TNFRSF10B-203ENST00000518531 CEP164Q9UPV0 1460 aa30.28■■■□□ 2.44
TNFRSF10B-203ENST00000518531 FANCD2Q9BXW9 1451 aa30.21■■■□□ 2.43
TNFRSF10B-203ENST00000518531 CFTRP13569 1480 aa30.13■■■□□ 2.41
TNFRSF10B-203ENST00000518531 RSF1Q96T23 1441 aaPredicted RBP30.03■■■□□ 2.4
TNFRSF10B-203ENST00000518531 TOP2AP11388 1531 aaKnown RBP30.01■■■□□ 2.4
TNFRSF10B-203ENST00000518531 URB2Q14146 1524 aaKnown RBP30.01■■■□□ 2.4
TNFRSF10B-203ENST00000518531 OSCARQ8IYS5 282 aa29.97■■■□□ 2.39
TNFRSF10B-203ENST00000518531 PRDM2Q13029 1718 aa29.79■■■□□ 2.36
TNFRSF10B-203ENST00000518531 ZNF608Q9ULD9 1512 aaPredicted RBP29.71■■■□□ 2.35
TNFRSF10B-203ENST00000518531 IFT140Q96RY7 1462 aa29.68■■■□□ 2.34
TNFRSF10B-203ENST00000518531 RIMBP3CA6NJZ7 1639 aa29.68■■■□□ 2.34
TNFRSF10B-203ENST00000518531 RIMBP3BA6NNM3 1639 aa29.68■■■□□ 2.34
TNFRSF10B-203ENST00000518531 RIMBP3Q9UFD9 1639 aa29.68■■■□□ 2.34
TNFRSF10B-203ENST00000518531 CCDC88BA6NC98 1476 aa29.67■■■□□ 2.34
TNFRSF10B-203ENST00000518531 TOPBP1Q92547 1522 aa29.61■■■□□ 2.33
TNFRSF10B-203ENST00000518531 ARHGEF11O15085 1522 aa29.55■■■□□ 2.32
TNFRSF10B-203ENST00000518531 EIF4G3O43432 1585 aaKnown RBP29.52■■■□□ 2.32
TNFRSF10B-203ENST00000518531 ABCC8Q09428 1581 aa29.48■■■□□ 2.31
TNFRSF10B-203ENST00000518531 DNMBPQ6XZF7 1577 aa29.47■■■□□ 2.31
TNFRSF10B-203ENST00000518531 TARBP1Q13395 1621 aaKnown RBP29.38■■■□□ 2.29
TNFRSF10B-203ENST00000518531 AQRO60306 1485 aaKnown RBP eCLIP29.36■■■□□ 2.291e-7■■■■□ 25.9
TNFRSF10B-203ENST00000518531 CHD1O14646 1710 aa29.36■■■□□ 2.29
TNFRSF10B-203ENST00000518531 CYB5RLQ6IPT4 315 aa29.32■■■□□ 2.28
TNFRSF10B-203ENST00000518531 POLA1P09884 1462 aaPredicted RBP29.29■■■□□ 2.28
TNFRSF10B-203ENST00000518531 ARAP1Q96P48 1450 aa29.24■■■□□ 2.27
TNFRSF10B-203ENST00000518531 FBLN2P98095 1184 aa29.22■■■□□ 2.27
TNFRSF10B-203ENST00000518531 RAD54L2Q9Y4B4 1467 aa29.19■■■□□ 2.26
TNFRSF10B-203ENST00000518531 TDRD9Q8NDG6 1382 aaKnown RBP29.13■■■□□ 2.25
TNFRSF10B-203ENST00000518531 SOGA1O94964 1423 aa29.11■■■□□ 2.25
TNFRSF10B-203ENST00000518531 TRHP20396 242 aaPredicted RBP29.1■■■□□ 2.25
TNFRSF10B-203ENST00000518531 SNAPC4Q5SXM2 1469 aa29.07■■■□□ 2.24
TNFRSF10B-203ENST00000518531 FGD5Q6ZNL6 1462 aa29.05■■■□□ 2.24
TNFRSF10B-203ENST00000518531 WDR97A6NE52 1622 aa29.03■■■□□ 2.24
TNFRSF10B-203ENST00000518531 CLASP1Q7Z460 1538 aa29.03■■■□□ 2.24
TNFRSF10B-203ENST00000518531 CUX1P39880 1505 aa28.98■■■□□ 2.23
TNFRSF10B-203ENST00000518531 MAGI1Q96QZ7 1491 aaPredicted RBP28.96■■■□□ 2.23
TNFRSF10B-203ENST00000518531 SYNJ1O43426 1573 aa28.95■■■□□ 2.22
TNFRSF10B-203ENST00000518531 CHMP7Q8WUX9 453 aaPredicted RBP28.93■■■□□ 2.22
TNFRSF10B-203ENST00000518531 GRIN2BQ13224 1484 aa28.92■■■□□ 2.22
TNFRSF10B-203ENST00000518531 SYNJ2O15056 1496 aa28.87■■■□□ 2.21
TNFRSF10B-203ENST00000518531 PBRM1Q86U86 1689 aa28.8■■■□□ 2.2
TNFRSF10B-203ENST00000518531 GAPVD1Q14C86 1478 aa28.77■■■□□ 2.2
TNFRSF10B-203ENST00000518531 ABCA5Q8WWZ7 1642 aa28.7■■■□□ 2.19
TNFRSF10B-203ENST00000518531 ABCA10Q8WWZ4 1543 aa28.69■■■□□ 2.18
TNFRSF10B-203ENST00000518531 GRIN2AQ12879 1464 aa28.56■■■□□ 2.16
TNFRSF10B-203ENST00000518531 ERCC6L2Q5T890 1561 aa28.56■■■□□ 2.16
TNFRSF10B-203ENST00000518531 ADAMTS12P58397 1594 aa28.51■■■□□ 2.15
TNFRSF10B-203ENST00000518531 AEBP2Q6ZN18 517 aaPredicted RBP28.51■■■□□ 2.15
TNFRSF10B-203ENST00000518531 WRNQ14191 1432 aaPredicted RBP eCLIP28.49■■■□□ 2.15
TNFRSF10B-203ENST00000518531 CEP170Q5SW79 1584 aa28.49■■■□□ 2.15
TNFRSF10B-203ENST00000518531 NUP160Q12769 1436 aa28.48■■■□□ 2.15
TNFRSF10B-203ENST00000518531 SHROOM2Q13796 1616 aa28.4■■■□□ 2.14
TNFRSF10B-203ENST00000518531 BIVM-ERCC5R4GMW8 1640 aa28.4■■■□□ 2.14
TNFRSF10B-203ENST00000518531 SUPT5HO00267 1087 aaKnown RBP28.4■■■□□ 2.14
TNFRSF10B-203ENST00000518531 TOP2BQ02880 1626 aa28.4■■■□□ 2.14
TNFRSF10B-203ENST00000518531 FHAD1B1AJZ9 1412 aa28.39■■■□□ 2.14
TNFRSF10B-203ENST00000518531 ERICH3Q5RHP9 1530 aa28.32■■■□□ 2.12
TNFRSF10B-203ENST00000518531 PRG4Q92954 1404 aaPredicted RBP28.22■■■□□ 2.11
TNFRSF10B-203ENST00000518531 KIF13AQ9H1H9 1805 aa28.21■■■□□ 2.11
TNFRSF10B-203ENST00000518531 JPH4Q96JJ6 628 aa28.15■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms