RNA–Protein interactions for RNA: ENST00000517880.1

CPEB4-203, Transcript of cytoplasmic polyadenylation element binding protein 4, humanhuman

TSL 1 (best) BASIC

Gene CPEB4, Length 1,416 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB4-203ENST00000517880 CADPS2Q86UW7 1296 aa13.73□□□□□ -0.21
CPEB4-203ENST00000517880 RTF1Q92541 710 aaKnown RBP13.73□□□□□ -0.21
CPEB4-203ENST00000517880 ORAI2Q96SN7 254 aa13.73□□□□□ -0.21
CPEB4-203ENST00000517880 NFAT5O94916 1531 aa13.73□□□□□ -0.21
CPEB4-203ENST00000517880 CHL1O00533 1208 aa13.73□□□□□ -0.21
CPEB4-203ENST00000517880 PITPNM1O00562 1244 aa13.73□□□□□ -0.21
CPEB4-203ENST00000517880 FOXO3O43524 673 aa13.73□□□□□ -0.21
CPEB4-203ENST00000517880 BCL2L13Q9BXK5 485 aa13.73□□□□□ -0.21
CPEB4-203ENST00000517880 PLSCR2Q9NRY7 297 aa13.73□□□□□ -0.21
CPEB4-203ENST00000517880 DDX19BQ9UMR2 479 aa13.73□□□□□ -0.21
CPEB4-203ENST00000517880 KIAA0232Q92628 1395 aa13.72□□□□□ -0.21
CPEB4-203ENST00000517880 THUMPD2Q9BTF0 503 aaKnown RBP13.72□□□□□ -0.21
CPEB4-203ENST00000517880 BABAM1Q9NWV8 329 aa13.72□□□□□ -0.21
CPEB4-203ENST00000517880 NOB1Q9ULX3 412 aaKnown RBP13.72□□□□□ -0.21
CPEB4-203ENST00000517880 TMEM94Q12767 1356 aa13.71□□□□□ -0.21
CPEB4-203ENST00000517880 SLIT3O75094 1523 aa13.71□□□□□ -0.21
CPEB4-203ENST00000517880 LTN1O94822 1766 aa13.71□□□□□ -0.21
CPEB4-203ENST00000517880 RLBP1P12271 317 aa13.71□□□□□ -0.22
CPEB4-203ENST00000517880 MTHFSDQ2M296 383 aaKnown RBP13.71□□□□□ -0.22
CPEB4-203ENST00000517880 TWISTNBQ3B726 338 aaPredicted RBP13.71□□□□□ -0.22
CPEB4-203ENST00000517880 RWDD1Q9H446 243 aaPredicted RBP13.71□□□□□ -0.22
CPEB4-203ENST00000517880 USP19O94966 1318 aa13.71□□□□□ -0.22
CPEB4-203ENST00000517880 TRPM3Q9HCF6 1732 aaPredicted RBP13.7□□□□□ -0.22
CPEB4-203ENST00000517880 GCP02774 474 aa13.7□□□□□ -0.22
CPEB4-203ENST00000517880 TRIM27P14373 513 aa13.7□□□□□ -0.22
CPEB4-203ENST00000517880 LHX8Q68G74 356 aa13.7□□□□□ -0.22
CPEB4-203ENST00000517880 MRPL50Q8N5N7 158 aaKnown RBP13.7□□□□□ -0.22
CPEB4-203ENST00000517880 FAM83GA6ND36 823 aa13.69□□□□□ -0.22
CPEB4-203ENST00000517880 MSH6P52701 1360 aa13.69□□□□□ -0.22
CPEB4-203ENST00000517880 SOS1Q07889 1333 aaPredicted RBP13.69□□□□□ -0.22
CPEB4-203ENST00000517880 ARHGEF25Q86VW2 580 aa13.69□□□□□ -0.22
CPEB4-203ENST00000517880 CRB1P82279 1406 aa13.68□□□□□ -0.22
CPEB4-203ENST00000517880 GNAT3A8MTJ3 354 aa13.68□□□□□ -0.22
CPEB4-203ENST00000517880 API5Q9BZZ5 524 aaKnown RBP13.68□□□□□ -0.22
CPEB4-203ENST00000517880 STRCP1A6NGW2 1772 aa13.68□□□□□ -0.22
CPEB4-203ENST00000517880 NPHP3Q7Z494 1330 aa13.67□□□□□ -0.22
CPEB4-203ENST00000517880 KDM4FA0A1W2PPD8 638 aa13.67□□□□□ -0.22
CPEB4-203ENST00000517880 DCTN1Q14203 1278 aa13.67□□□□□ -0.22
CPEB4-203ENST00000517880 C8orf58Q8NAV2 365 aa13.67□□□□□ -0.22
CPEB4-203ENST00000517880 IGHDP01880 384 aa13.66□□□□□ -0.22
CPEB4-203ENST00000517880 HSPA2P54652 639 aa13.66□□□□□ -0.22
CPEB4-203ENST00000517880 MCM10Q7L590 875 aa13.66□□□□□ -0.22
CPEB4-203ENST00000517880 TSPYL6Q8N831 410 aa13.66□□□□□ -0.22
CPEB4-203ENST00000517880 LMTK3Q96Q04 1460 aa13.66□□□□□ -0.22
CPEB4-203ENST00000517880 PDE4AP27815 886 aa13.65□□□□□ -0.22
CPEB4-203ENST00000517880 LTV1Q96GA3 475 aaPredicted RBP13.65□□□□□ -0.22
CPEB4-203ENST00000517880 TNNQ9UQP3 1299 aa13.65□□□□□ -0.22
CPEB4-203ENST00000517880 ALS2Q96Q42 1657 aa13.65□□□□□ -0.22
CPEB4-203ENST00000517880 MAP3K5Q99683 1374 aa13.65□□□□□ -0.22
CPEB4-203ENST00000517880 AMOTQ4VCS5 1084 aa13.64□□□□□ -0.23
CPEB4-203ENST00000517880 LMOD2Q6P5Q4 547 aa13.64□□□□□ -0.23
CPEB4-203ENST00000517880 ITPRIPQ8IWB1 547 aa13.64□□□□□ -0.23
CPEB4-203ENST00000517880 TMEM57Q8N5G2 664 aa13.64□□□□□ -0.23
CPEB4-203ENST00000517880 CHMP4AQ9BY43 222 aa13.64□□□□□ -0.23
CPEB4-203ENST00000517880 BACH2Q9BYV9 841 aa13.64□□□□□ -0.23
CPEB4-203ENST00000517880 PCDHB15Q9Y5E8 787 aa13.64□□□□□ -0.23
CPEB4-203ENST00000517880 HDAC1Q13547 482 aaPredicted RBP13.64□□□□□ -0.23
CPEB4-203ENST00000517880 PLEKHO1Q53GL0 409 aaPredicted RBP13.64□□□□□ -0.23
CPEB4-203ENST00000517880 ZBTB40Q9NUA8 1239 aa13.64□□□□□ -0.23
CPEB4-203ENST00000517880 NCAPD2Q15021 1401 aa13.63□□□□□ -0.23
CPEB4-203ENST00000517880 STRCQ7RTU9 1775 aa13.63□□□□□ -0.23
CPEB4-203ENST00000517880 ELL2O00472 640 aaPredicted RBP13.63□□□□□ -0.23
CPEB4-203ENST00000517880 XPCQ01831 940 aaPredicted RBP13.63□□□□□ -0.23
CPEB4-203ENST00000517880 TAF7Q15545 349 aaPredicted RBP13.63□□□□□ -0.23
CPEB4-203ENST00000517880 NBPF6Q5VWK0 638 aa13.63□□□□□ -0.23
CPEB4-203ENST00000517880 NBPF4Q96M43 638 aa13.63□□□□□ -0.23
CPEB4-203ENST00000517880 TSPYL4Q9UJ04 414 aa13.63□□□□□ -0.23
CPEB4-203ENST00000517880 PTPRCP08575 1304 aa13.62□□□□□ -0.23
CPEB4-203ENST00000517880 PLEKHG2Q9H7P9 1386 aa13.61□□□□□ -0.23
CPEB4-203ENST00000517880 ABCC6O95255 1503 aa13.61□□□□□ -0.23
CPEB4-203ENST00000517880 LRRC37A3O60309 1634 aa13.61□□□□□ -0.23
CPEB4-203ENST00000517880 ABCC4O15439 1325 aa13.61□□□□□ -0.23
CPEB4-203ENST00000517880 TNS3Q68CZ2 1445 aa13.6□□□□□ -0.23
CPEB4-203ENST00000517880 ZBTB7BO15156 539 aaPredicted RBP13.6□□□□□ -0.23
CPEB4-203ENST00000517880 FAM161AQ3B820 660 aa13.6□□□□□ -0.23
CPEB4-203ENST00000517880 AKAP4Q5JQC9 854 aa13.6□□□□□ -0.23
CPEB4-203ENST00000517880 ANKRD24Q8TF21 1146 aa13.6□□□□□ -0.23
CPEB4-203ENST00000517880 SPATA31A3Q5VYP0 1347 aa13.59□□□□□ -0.23
CPEB4-203ENST00000517880 ZBTB7CA1YPR0 619 aa13.59□□□□□ -0.23
CPEB4-203ENST00000517880 ANP32AP39687 249 aaKnown RBP13.59□□□□□ -0.23
CPEB4-203ENST00000517880 INTS3Q68E01 1043 aaKnown RBP13.59□□□□□ -0.23
CPEB4-203ENST00000517880 IL17REQ8NFR9 667 aa13.59□□□□□ -0.23
CPEB4-203ENST00000517880 CAMTA1Q9Y6Y1 1673 aa13.59□□□□□ -0.23
CPEB4-203ENST00000517880 OVOS2A0A0G2JMS6 1433 aa13.59□□□□□ -0.23
CPEB4-203ENST00000517880 XIRP1Q702N8 1843 aaKnown RBP13.58□□□□□ -0.23
CPEB4-203ENST00000517880 CEMIPQ8WUJ3 1361 aa13.58□□□□□ -0.24
CPEB4-203ENST00000517880 MED1Q15648 1581 aaPredicted RBP13.57□□□□□ -0.24
CPEB4-203ENST00000517880 PXDNQ92626 1479 aa13.57□□□□□ -0.24
CPEB4-203ENST00000517880 CCDC30Q5VVM6 783 aa13.57□□□□□ -0.24
CPEB4-203ENST00000517880 USHBP1Q8N6Y0 703 aa13.57□□□□□ -0.24
CPEB4-203ENST00000517880 HOXB7P09629 217 aa13.56□□□□□ -0.24
CPEB4-203ENST00000517880 C1orf141Q5JVX7 400 aa13.56□□□□□ -0.24
CPEB4-203ENST00000517880 SMC5Q8IY18 1101 aa13.56□□□□□ -0.24
CPEB4-203ENST00000517880 STK31Q9BXU1 1019 aa13.56□□□□□ -0.24
CPEB4-203ENST00000517880 SLAIN2Q9P270 581 aa13.56□□□□□ -0.24
CPEB4-203ENST00000517880 LMO7Q8WWI1 1683 aa13.56□□□□□ -0.24
CPEB4-203ENST00000517880 CPDO75976 1380 aa13.56□□□□□ -0.24
CPEB4-203ENST00000517880 CACNA1FO60840 1977 aa13.56□□□□□ -0.24
CPEB4-203ENST00000517880 RGS3P49796 1198 aa13.56□□□□□ -0.24
CPEB4-203ENST00000517880 ZNF530Q6P9A1 599 aaPredicted RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms