RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 CAPN12Q6ZSI9 719 aa5.41□□□□□ -1.54
RNU4-60P-201ENST00000517239 TATDN2Q93075 761 aa5.41□□□□□ -1.54
RNU4-60P-201ENST00000517239 BRINP2Q9C0B6 783 aa5.41□□□□□ -1.54
RNU4-60P-201ENST00000517239 IFT57Q9NWB7 429 aa5.41□□□□□ -1.54
RNU4-60P-201ENST00000517239 MAGEC2Q9UBF1 373 aaPredicted RBP5.41□□□□□ -1.54
RNU4-60P-201ENST00000517239 NOD1Q9Y239 953 aa5.41□□□□□ -1.54
RNU4-60P-201ENST00000517239 FAN1Q9Y2M0 1017 aa5.41□□□□□ -1.54
RNU4-60P-201ENST00000517239 PCDHGA4Q9Y5G9 962 aa5.41□□□□□ -1.54
RNU4-60P-201ENST00000517239 COL4A3BPQ9Y5P4 624 aa5.41□□□□□ -1.54
RNU4-60P-201ENST00000517239 MRPL42Q9Y6G3 142 aaKnown RBP5.41□□□□□ -1.54
RNU4-60P-201ENST00000517239 SFI1A8K8P3 1242 aa5.4□□□□□ -1.54
RNU4-60P-201ENST00000517239 PRPF40AO75400 957 aaKnown RBP5.4□□□□□ -1.54
RNU4-60P-201ENST00000517239 MCCD1P59942 119 aaPredicted RBP5.4□□□□□ -1.54
RNU4-60P-201ENST00000517239 FGD1P98174 961 aa5.4□□□□□ -1.54
RNU4-60P-201ENST00000517239 TSGA10IPQ3SY00 556 aa5.4□□□□□ -1.54
RNU4-60P-201ENST00000517239 TMC4Q7Z404 712 aa5.4□□□□□ -1.54
RNU4-60P-201ENST00000517239 VPS37DQ86XT2 251 aa5.4□□□□□ -1.54
RNU4-60P-201ENST00000517239 PHTF2Q8N3S3 785 aa5.4□□□□□ -1.54
RNU4-60P-201ENST00000517239 MRFAP1L1Q96HT8 127 aa5.4□□□□□ -1.54
RNU4-60P-201ENST00000517239 TSKSQ9UJT2 592 aa5.4□□□□□ -1.54
RNU4-60P-201ENST00000517239 G3BP2Q9UN86 482 aaKnown RBP5.4□□□□□ -1.54
RNU4-60P-201ENST00000517239 CCDC194A0A1B0GVG4 234 aa5.39□□□□□ -1.55
RNU4-60P-201ENST00000517239 NBPF26B4DH59 902 aa5.39□□□□□ -1.55
RNU4-60P-201ENST00000517239 TREHO43280 583 aa5.39□□□□□ -1.55
RNU4-60P-201ENST00000517239 DKK1O94907 266 aa5.39□□□□□ -1.55
RNU4-60P-201ENST00000517239 PLCG2P16885 1265 aa5.39□□□□□ -1.55
RNU4-60P-201ENST00000517239 DAB2P98082 770 aa5.39□□□□□ -1.55
RNU4-60P-201ENST00000517239 NAA30Q147X3 362 aaPredicted RBP5.39□□□□□ -1.55
RNU4-60P-201ENST00000517239 MAP7D1Q3KQU3 841 aa5.39□□□□□ -1.55
RNU4-60P-201ENST00000517239 RBCK1Q9BYM8 510 aa5.39□□□□□ -1.55
RNU4-60P-201ENST00000517239 PCDH12Q9NPG4 1184 aa5.39□□□□□ -1.55
RNU4-60P-201ENST00000517239 FKBPLQ9UIM3 349 aa5.39□□□□□ -1.55
RNU4-60P-201ENST00000517239 WWC3Q9ULE0 1092 aa5.39□□□□□ -1.55
RNU4-60P-201ENST00000517239 KIAA1024Q9UPX6 916 aa5.39□□□□□ -1.55
RNU4-60P-201ENST00000517239 PCDHB9Q9Y5E1 797 aa5.39□□□□□ -1.55
RNU4-60P-201ENST00000517239 SMAPO00193 183 aa5.38□□□□□ -1.55
RNU4-60P-201ENST00000517239 FAM13AO94988 1023 aa5.38□□□□□ -1.55
RNU4-60P-201ENST00000517239 SLC10A3P09131 477 aa5.38□□□□□ -1.55
RNU4-60P-201ENST00000517239 COL9A1P20849 921 aa5.38□□□□□ -1.55
RNU4-60P-201ENST00000517239 FMR1Q06787 632 aaKnown RBP eCLIP5.38□□□□□ -1.55
RNU4-60P-201ENST00000517239 NFE2L2Q16236 605 aa5.38□□□□□ -1.55
RNU4-60P-201ENST00000517239 PLEKHG6Q3KR16 790 aa5.38□□□□□ -1.55
RNU4-60P-201ENST00000517239 GRIPAP1Q4V328 841 aa5.38□□□□□ -1.55
RNU4-60P-201ENST00000517239 CCDC102BQ68D86 513 aa5.38□□□□□ -1.55
RNU4-60P-201ENST00000517239 SMC5Q8IY18 1101 aa5.38□□□□□ -1.55
RNU4-60P-201ENST00000517239 ZNF654Q8IZM8 581 aa5.38□□□□□ -1.55
RNU4-60P-201ENST00000517239 SIX5Q8N196 739 aa5.38□□□□□ -1.55
RNU4-60P-201ENST00000517239 PMM1Q92871 262 aa5.38□□□□□ -1.55
RNU4-60P-201ENST00000517239 GABBR1Q9UBS5 961 aa5.38□□□□□ -1.55
RNU4-60P-201ENST00000517239 NDUFB5O43674 189 aa5.37□□□□□ -1.55
RNU4-60P-201ENST00000517239 DNAJC6O75061 913 aa5.37□□□□□ -1.55
RNU4-60P-201ENST00000517239 CENPBP07199 599 aaPredicted RBP5.37□□□□□ -1.55
RNU4-60P-201ENST00000517239 ATN1P54259 1190 aaPredicted RBP5.37□□□□□ -1.55
RNU4-60P-201ENST00000517239 AAMPQ13685 434 aa5.37□□□□□ -1.55
RNU4-60P-201ENST00000517239 HSP90AB4PQ58FF6 505 aa5.37□□□□□ -1.55
RNU4-60P-201ENST00000517239 TRAF7Q6Q0C0 670 aa5.37□□□□□ -1.55
RNU4-60P-201ENST00000517239 PACS2Q86VP3 889 aa5.37□□□□□ -1.55
RNU4-60P-201ENST00000517239 MCF2L2Q86YR7 1114 aa5.37□□□□□ -1.55
RNU4-60P-201ENST00000517239 TPCN2Q8NHX9 752 aa5.37□□□□□ -1.55
RNU4-60P-201ENST00000517239 EMILIN1Q9Y6C2 1016 aa5.37□□□□□ -1.55
RNU4-60P-201ENST00000517239 PPP1R12AO14974 1030 aaPredicted RBP5.36□□□□□ -1.55
RNU4-60P-201ENST00000517239 PTCD1O75127 700 aaKnown RBP5.36□□□□□ -1.55
RNU4-60P-201ENST00000517239 GTF2IP78347 998 aa5.36□□□□□ -1.55
RNU4-60P-201ENST00000517239 ATP2B2Q01814 1243 aa5.36□□□□□ -1.55
RNU4-60P-201ENST00000517239 EHHADHQ08426 723 aa5.36□□□□□ -1.55
RNU4-60P-201ENST00000517239 FUT2Q10981 343 aa5.36□□□□□ -1.55
RNU4-60P-201ENST00000517239 DSC3Q14574 896 aa5.36□□□□□ -1.55
RNU4-60P-201ENST00000517239 ZNF394Q53GI3 561 aa5.36□□□□□ -1.55
RNU4-60P-201ENST00000517239 LYPD8Q6UX82 237 aa5.36□□□□□ -1.55
RNU4-60P-201ENST00000517239 APBB1IPQ7Z5R6 666 aaPredicted RBP5.36□□□□□ -1.55
RNU4-60P-201ENST00000517239 TEX2Q8IWB9 1127 aa5.36□□□□□ -1.55
RNU4-60P-201ENST00000517239 GAS2L2Q8NHY3 880 aa5.36□□□□□ -1.55
RNU4-60P-201ENST00000517239 PURBQ96QR8 312 aaKnown RBP5.36□□□□□ -1.55
RNU4-60P-201ENST00000517239 SETDB2Q96T68 719 aa5.36□□□□□ -1.55
RNU4-60P-201ENST00000517239 SPOCK3Q9BQ16 436 aa5.36□□□□□ -1.55
RNU4-60P-201ENST00000517239 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.36□□□□□ -1.55
RNU4-60P-201ENST00000517239 SPC25Q9HBM1 224 aa5.36□□□□□ -1.55
RNU4-60P-201ENST00000517239 DDX41Q9UJV9 622 aaKnown RBP5.36□□□□□ -1.55
RNU4-60P-201ENST00000517239 A0A0U1RQG5 324 aaPredicted RBP5.35□□□□□ -1.55
RNU4-60P-201ENST00000517239 KDM4FA0A1W2PPD8 638 aa5.35□□□□□ -1.55
RNU4-60P-201ENST00000517239 K7ELQ4 463 aaPredicted RBP5.35□□□□□ -1.55
RNU4-60P-201ENST00000517239 S100BP04271 92 aaPredicted RBP5.35□□□□□ -1.55
RNU4-60P-201ENST00000517239 XRCC5P13010 732 aaKnown RBP5.35□□□□□ -1.55
RNU4-60P-201ENST00000517239 RACK1P63244 317 aaKnown RBP5.35□□□□□ -1.55
RNU4-60P-201ENST00000517239 FKBP5Q13451 457 aaPredicted RBP5.35□□□□□ -1.55
RNU4-60P-201ENST00000517239 OXLD1Q5BKU9 147 aa5.35□□□□□ -1.55
RNU4-60P-201ENST00000517239 CCAR1Q8IX12 1150 aaKnown RBP5.35□□□□□ -1.55
RNU4-60P-201ENST00000517239 HELQQ8TDG4 1101 aa5.35□□□□□ -1.55
RNU4-60P-201ENST00000517239 IRF2BPLQ9H1B7 796 aa5.35□□□□□ -1.55
RNU4-60P-201ENST00000517239 DDX56Q9NY93 547 aaKnown RBP5.35□□□□□ -1.55
RNU4-60P-201ENST00000517239 CHIC2Q9UKJ5 165 aa5.35□□□□□ -1.55
RNU4-60P-201ENST00000517239 PCDHGB7Q9Y5F8 929 aa5.35□□□□□ -1.55
RNU4-60P-201ENST00000517239 MPSTP25325 297 aa5.34□□□□□ -1.55
RNU4-60P-201ENST00000517239 RALBP1Q15311 655 aa5.34□□□□□ -1.55
RNU4-60P-201ENST00000517239 IER5LQ5T953 404 aa5.34□□□□□ -1.55
RNU4-60P-201ENST00000517239 RETREG3Q86VR2 466 aa5.34□□□□□ -1.55
RNU4-60P-201ENST00000517239 FMNL3Q8IVF7 1028 aa5.34□□□□□ -1.55
RNU4-60P-201ENST00000517239 CKAP2LQ8IYA6 745 aa5.34□□□□□ -1.55
RNU4-60P-201ENST00000517239 CCDC146Q8IYE0 955 aa5.34□□□□□ -1.55
RNU4-60P-201ENST00000517239 RPUSD2Q8IZ73 545 aaKnown RBP5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms