RNA–Protein interactions for RNA: ENST00000517138.1

SCARNA1-201, small Cajal body-specific RNA 1, humanhuman

BASIC

Gene SCARNA1, Length 166 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA1-201ENST00000517138 A6NJR5 290 aa11.18□□□□□ -0.62
SCARNA1-201ENST00000517138 STAU1O95793 577 aaKnown RBP11.18□□□□□ -0.62
SCARNA1-201ENST00000517138 OXLD1Q5BKU9 147 aa11.18□□□□□ -0.62
SCARNA1-201ENST00000517138 HDGFL1Q5TGJ6 251 aa11.18□□□□□ -0.62
SCARNA1-201ENST00000517138 ATP5J2-PTCD1G3V325 749 aa11.17□□□□□ -0.62
SCARNA1-201ENST00000517138 PLPP7Q8NBV4 271 aa11.17□□□□□ -0.62
SCARNA1-201ENST00000517138 TTLL8A6PVC2 850 aa11.16□□□□□ -0.62
SCARNA1-201ENST00000517138 MAN1A2O60476 641 aa11.16□□□□□ -0.62
SCARNA1-201ENST00000517138 FOXD4L5Q5VV16 416 aaPredicted RBP11.16□□□□□ -0.62
SCARNA1-201ENST00000517138 CCDC125Q86Z20 511 aa11.16□□□□□ -0.62
SCARNA1-201ENST00000517138 UCN2Q96RP3 112 aa11.16□□□□□ -0.62
SCARNA1-201ENST00000517138 RAB6BQ9NRW1 208 aa11.16□□□□□ -0.62
SCARNA1-201ENST00000517138 VEGFBP49765 207 aa11.15□□□□□ -0.62
SCARNA1-201ENST00000517138 POLMQ9NP87 494 aaPredicted RBP11.15□□□□□ -0.62
SCARNA1-201ENST00000517138 A0A1W2PRU2 124 aa11.14□□□□□ -0.63
SCARNA1-201ENST00000517138 SKIP12755 728 aa11.13□□□□□ -0.63
SCARNA1-201ENST00000517138 LCE2CQ5TA81 110 aa11.13□□□□□ -0.63
SCARNA1-201ENST00000517138 RNF217Q8TC41 542 aa11.13□□□□□ -0.63
SCARNA1-201ENST00000517138 GLMNQ92990 594 aa11.13□□□□□ -0.63
SCARNA1-201ENST00000517138 ARHGEF10LQ9HCE6 1279 aa11.13□□□□□ -0.63
SCARNA1-201ENST00000517138 MEN1O00255 615 aa11.12□□□□□ -0.63
SCARNA1-201ENST00000517138 DEPDC4Q8N2C3 294 aa11.12□□□□□ -0.63
SCARNA1-201ENST00000517138 NFX1Q12986 1120 aaKnown RBP11.11□□□□□ -0.63
SCARNA1-201ENST00000517138 TBC1D9Q6ZT07 1266 aa11.11□□□□□ -0.63
SCARNA1-201ENST00000517138 CYP2U1Q7Z449 544 aa11.11□□□□□ -0.63
SCARNA1-201ENST00000517138 MYCP01106 439 aaPredicted RBP11.1□□□□□ -0.63
SCARNA1-201ENST00000517138 ZNF777Q9ULD5 760 aaPredicted RBP11.1□□□□□ -0.63
SCARNA1-201ENST00000517138 TERTO14746 1132 aaKnown RBP11.09□□□□□ -0.63
SCARNA1-201ENST00000517138 IL2RAP01589 272 aa11.09□□□□□ -0.63
SCARNA1-201ENST00000517138 USP4Q13107 963 aa11.09□□□□□ -0.63
SCARNA1-201ENST00000517138 MAP7D1Q3KQU3 841 aa11.09□□□□□ -0.63
SCARNA1-201ENST00000517138 LCE2AQ5TA79 106 aaPredicted RBP11.09□□□□□ -0.63
SCARNA1-201ENST00000517138 ESF1Q9H501 851 aaKnown RBP11.09□□□□□ -0.63
SCARNA1-201ENST00000517138 NCOA4Q13772 614 aa11.08□□□□□ -0.64
SCARNA1-201ENST00000517138 NXF1Q9UBU9 619 aaKnown RBP11.08□□□□□ -0.64
SCARNA1-201ENST00000517138 CLN3Q13286 438 aa11.07□□□□□ -0.64
SCARNA1-201ENST00000517138 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.07□□□□□ -0.64
SCARNA1-201ENST00000517138 USP17L5A8MUK1 530 aa11.06□□□□□ -0.64
SCARNA1-201ENST00000517138 RNF144AP50876 292 aaPredicted RBP11.06□□□□□ -0.64
SCARNA1-201ENST00000517138 PTSQ03393 145 aa11.06□□□□□ -0.64
SCARNA1-201ENST00000517138 PRICKLE2Q7Z3G6 844 aa11.06□□□□□ -0.64
SCARNA1-201ENST00000517138 ETNK1Q9HBU6 452 aa11.06□□□□□ -0.64
SCARNA1-201ENST00000517138 GNRH1P01148 92 aa11.05□□□□□ -0.64
SCARNA1-201ENST00000517138 RHOQP17081 205 aa11.05□□□□□ -0.64
SCARNA1-201ENST00000517138 TREML4Q6UXN2 200 aa11.05□□□□□ -0.64
SCARNA1-201ENST00000517138 NFATC2IPQ8NCF5 419 aa11.05□□□□□ -0.64
SCARNA1-201ENST00000517138 CNKSR1Q969H4 720 aa11.05□□□□□ -0.64
SCARNA1-201ENST00000517138 TRIM52Q96A61 297 aa11.05□□□□□ -0.64
SCARNA1-201ENST00000517138 SCNN1DP51172 638 aa11.04□□□□□ -0.64
SCARNA1-201ENST00000517138 CALR3Q96L12 384 aaKnown RBP11.04□□□□□ -0.64
SCARNA1-201ENST00000517138 ZMYND15Q9H091 742 aa11.04□□□□□ -0.64
SCARNA1-201ENST00000517138 PCDHGA11Q9Y5H2 935 aa11.04□□□□□ -0.64
SCARNA1-201ENST00000517138 HRH3Q9Y5N1 445 aa11.04□□□□□ -0.64
SCARNA1-201ENST00000517138 SENP3-EIF4A1A0A087X0R7 540 aa11.03□□□□□ -0.64
SCARNA1-201ENST00000517138 ATP9BO43861 1147 aa11.03□□□□□ -0.64
SCARNA1-201ENST00000517138 PPFIA3O75145 1194 aa11.03□□□□□ -0.64
SCARNA1-201ENST00000517138 WFS1O76024 890 aa11.03□□□□□ -0.64
SCARNA1-201ENST00000517138 EML3Q32P44 896 aa11.03□□□□□ -0.64
SCARNA1-201ENST00000517138 LYSMD3Q7Z3D4 306 aa11.03□□□□□ -0.64
SCARNA1-201ENST00000517138 NLRP3Q96P20 1036 aa11.03□□□□□ -0.64
SCARNA1-201ENST00000517138 ESYT1Q9BSJ8 1104 aa11.03□□□□□ -0.64
SCARNA1-201ENST00000517138 GRIP2Q9C0E4 1043 aa11.03□□□□□ -0.64
SCARNA1-201ENST00000517138 TFIP11Q9UBB9 837 aaKnown RBP11.03□□□□□ -0.64
SCARNA1-201ENST00000517138 USP17L3A6NCW0 530 aa11.02□□□□□ -0.65
SCARNA1-201ENST00000517138 USP17L4A6NCW7 530 aa11.02□□□□□ -0.65
SCARNA1-201ENST00000517138 USP17L2Q6R6M4 530 aa11.02□□□□□ -0.65
SCARNA1-201ENST00000517138 USP17L1Q7RTZ2 530 aa11.02□□□□□ -0.65
SCARNA1-201ENST00000517138 XAGE2Q96GT9 111 aa11.02□□□□□ -0.65
SCARNA1-201ENST00000517138 ERBB4Q15303 1308 aa11.02□□□□□ -0.65
SCARNA1-201ENST00000517138 SLC35F4A4IF30 521 aa11.01□□□□□ -0.65
SCARNA1-201ENST00000517138 H3BM21 787 aa11.01□□□□□ -0.65
SCARNA1-201ENST00000517138 CENPCQ03188 943 aa11.01□□□□□ -0.65
SCARNA1-201ENST00000517138 POU4F2Q12837 409 aa11.01□□□□□ -0.65
SCARNA1-201ENST00000517138 SIRT1Q96EB6 747 aa11.01□□□□□ -0.65
SCARNA1-201ENST00000517138 TMEM229AB2RXF0 380 aa11□□□□□ -0.65
SCARNA1-201ENST00000517138 GPC1P35052 558 aa11□□□□□ -0.65
SCARNA1-201ENST00000517138 GDF10P55107 478 aa11□□□□□ -0.65
SCARNA1-201ENST00000517138 GTF2IP78347 998 aa11□□□□□ -0.65
SCARNA1-201ENST00000517138 SLC27A3Q5K4L6 730 aa11□□□□□ -0.65
SCARNA1-201ENST00000517138 CCDC155Q8N6L0 562 aa11□□□□□ -0.65
SCARNA1-201ENST00000517138 FHDC1Q9C0D6 1143 aaPredicted RBP11□□□□□ -0.65
SCARNA1-201ENST00000517138 KIAA1024Q9UPX6 916 aa11□□□□□ -0.65
SCARNA1-201ENST00000517138 NOD1Q9Y239 953 aa11□□□□□ -0.65
SCARNA1-201ENST00000517138 PALM3A6NDB9 673 aaPredicted RBP10.99□□□□□ -0.65
SCARNA1-201ENST00000517138 PLEKHM2Q8IWE5 1019 aa10.99□□□□□ -0.65
SCARNA1-201ENST00000517138 PPP1R12CQ9BZL4 782 aa10.98□□□□□ -0.65
SCARNA1-201ENST00000517138 SERTAD1Q9UHV2 236 aa10.98□□□□□ -0.65
SCARNA1-201ENST00000517138 MAFBQ9Y5Q3 323 aaPredicted RBP10.98□□□□□ -0.65
SCARNA1-201ENST00000517138 INHAP05111 366 aa10.97□□□□□ -0.65
SCARNA1-201ENST00000517138 CLDN10P78369 228 aa10.97□□□□□ -0.65
SCARNA1-201ENST00000517138 ZBTB7BO15156 539 aaPredicted RBP10.96□□□□□ -0.65
SCARNA1-201ENST00000517138 LZTS3O60299 673 aaPredicted RBP10.96□□□□□ -0.65
SCARNA1-201ENST00000517138 ESCO1Q5FWF5 840 aa10.96□□□□□ -0.65
SCARNA1-201ENST00000517138 NPAS3Q8IXF0 933 aa10.96□□□□□ -0.65
SCARNA1-201ENST00000517138 CUEDC1Q9NWM3 386 aaPredicted RBP10.96□□□□□ -0.65
SCARNA1-201ENST00000517138 MKRN1Q9UHC7 482 aaKnown RBP10.96□□□□□ -0.65
SCARNA1-201ENST00000517138 NBPF10Q6P3W6 841 aaKnown RBP10.95□□□□□ -0.66
SCARNA1-201ENST00000517138 NBPF15Q8N660 670 aa10.95□□□□□ -0.66
SCARNA1-201ENST00000517138 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.95□□□□□ -0.66
SCARNA1-201ENST00000517138 ZSCAN10Q96SZ4 725 aaPredicted RBP10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms