RNA–Protein interactions for RNA: ENST00000515629.5

SLC38A9-223, Transcript of solute carrier family 38 member 9, human

TSL 2 BASIC

Gene SLC38A9, Length 2,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLC38A9-223	ENST00000515629	TSPYL2	Q9H2G4	693 aa	Predicted RBP	5.41	□□□□□ -1.54
SLC38A9-223	ENST00000515629	NOP58	Q9Y2X3	529 aa	Known RBP	5.41	□□□□□ -1.54
SLC38A9-223	ENST00000515629	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	5.41	□□□□□ -1.54
SLC38A9-223	ENST00000515629	CCDC189	A1A4V9	331 aa		5.41	□□□□□ -1.54
SLC38A9-223	ENST00000515629	LMOD1	P29536	600 aa	Predicted RBP	5.41	□□□□□ -1.54
SLC38A9-223	ENST00000515629	MARS	P56192	900 aa	Known RBP	5.41	□□□□□ -1.54
SLC38A9-223	ENST00000515629	NEURL4	Q96JN8	1562 aa		5.41	□□□□□ -1.54
SLC38A9-223	ENST00000515629	WASHC2C	Q9Y4E1	1318 aa		5.41	□□□□□ -1.54
SLC38A9-223	ENST00000515629	PZP	P20742	1482 aa		5.41	□□□□□ -1.54
SLC38A9-223	ENST00000515629	SHANK2	Q9UPX8	1470 aa		5.41	□□□□□ -1.54
SLC38A9-223	ENST00000515629	NUTM2F	A1L443	756 aa		5.41	□□□□□ -1.54
SLC38A9-223	ENST00000515629	TOM1	O60784	492 aa		5.41	□□□□□ -1.54
SLC38A9-223	ENST00000515629	PHF14	O94880	888 aa		5.41	□□□□□ -1.54
SLC38A9-223	ENST00000515629	BIRC2	Q13490	618 aa		5.41	□□□□□ -1.54
SLC38A9-223	ENST00000515629	PPP1R12C	Q9BZL4	782 aa		5.41	□□□□□ -1.54
SLC38A9-223	ENST00000515629	EHBP1L1	Q8N3D4	1523 aa		5.4	□□□□□ -1.54
SLC38A9-223	ENST00000515629	CEP162	Q5TB80	1403 aa		5.4	□□□□□ -1.54
SLC38A9-223	ENST00000515629	BDNF	P23560	247 aa		5.4	□□□□□ -1.54
SLC38A9-223	ENST00000515629	TBX4	P57082	545 aa		5.4	□□□□□ -1.54
SLC38A9-223	ENST00000515629	NLRP6	P59044	892 aa		5.4	□□□□□ -1.54
SLC38A9-223	ENST00000515629	CHADL	Q6NUI6	762 aa		5.4	□□□□□ -1.54
SLC38A9-223	ENST00000515629	ANKLE2	Q86XL3	938 aa		5.4	□□□□□ -1.54
SLC38A9-223	ENST00000515629	THEMIS	Q8N1K5	641 aa	Predicted RBP	5.4	□□□□□ -1.54
SLC38A9-223	ENST00000515629	PMFBP1	Q8TBY8	1022 aa		5.4	□□□□□ -1.54
SLC38A9-223	ENST00000515629	RPS6KC1	Q96S38	1066 aa		5.4	□□□□□ -1.54
SLC38A9-223	ENST00000515629	WWC3	Q9ULE0	1092 aa		5.4	□□□□□ -1.54
SLC38A9-223	ENST00000515629	SALL2	Q9Y467	1007 aa	Predicted RBP	5.4	□□□□□ -1.54
SLC38A9-223	ENST00000515629	MIA2	Q96PC5	1412 aa		5.4	□□□□□ -1.55
SLC38A9-223	ENST00000515629	CCDC141	Q6ZP82	1450 aa		5.4	□□□□□ -1.55
SLC38A9-223	ENST00000515629	CPS1	P31327	1500 aa		5.4	□□□□□ -1.55
SLC38A9-223	ENST00000515629	KDM5D	Q9BY66	1539 aa		5.4	□□□□□ -1.55
SLC38A9-223	ENST00000515629	EPB41L2	O43491	1005 aa	Known RBP	5.4	□□□□□ -1.55
SLC38A9-223	ENST00000515629	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	5.4	□□□□□ -1.55
SLC38A9-223	ENST00000515629	KAT6B	Q8WYB5	2073 aa		5.39	□□□□□ -1.55
SLC38A9-223	ENST00000515629	PALM3	A6NDB9	673 aa	Predicted RBP	5.39	□□□□□ -1.55
SLC38A9-223	ENST00000515629	ZNF500	O60304	480 aa	Predicted RBP	5.39	□□□□□ -1.55
SLC38A9-223	ENST00000515629	VAMP1	P23763	118 aa		5.39	□□□□□ -1.55
SLC38A9-223	ENST00000515629	SSFA2	P28290	1259 aa		5.39	□□□□□ -1.55
SLC38A9-223	ENST00000515629	PDE6B	P35913	854 aa		5.39	□□□□□ -1.55
SLC38A9-223	ENST00000515629	RFC5	P40937	340 aa		5.39	□□□□□ -1.55
SLC38A9-223	ENST00000515629	RHBDL3	P58872	404 aa		5.39	□□□□□ -1.55
SLC38A9-223	ENST00000515629	MFSD10	Q14728	455 aa		5.39	□□□□□ -1.55
SLC38A9-223	ENST00000515629	PIK3R5	Q8WYR1	880 aa		5.39	□□□□□ -1.55
SLC38A9-223	ENST00000515629	DDX27	Q96GQ7	796 aa	Known RBP	5.39	□□□□□ -1.55
SLC38A9-223	ENST00000515629	ZSWIM4	Q9H7M6	989 aa		5.39	□□□□□ -1.55
SLC38A9-223	ENST00000515629	PRKAG2	Q9UGJ0	569 aa		5.39	□□□□□ -1.55
SLC38A9-223	ENST00000515629	DMGDH	Q9UI17	866 aa	Known RBP	5.39	□□□□□ -1.55
SLC38A9-223	ENST00000515629	COMMD10	Q9Y6G5	202 aa		5.39	□□□□□ -1.55
SLC38A9-223	ENST00000515629	POLR1A	O95602	1720 aa	Predicted RBP	5.39	□□□□□ -1.55
SLC38A9-223	ENST00000515629	NCOA2	Q15596	1464 aa		5.39	□□□□□ -1.55
SLC38A9-223	ENST00000515629	MED1	Q15648	1581 aa	Predicted RBP	5.39	□□□□□ -1.55
SLC38A9-223	ENST00000515629	C7	P10643	843 aa		5.39	□□□□□ -1.55
SLC38A9-223	ENST00000515629	SERPINB4	P48594	390 aa		5.39	□□□□□ -1.55
SLC38A9-223	ENST00000515629	PIP4P2	Q8N4L2	257 aa		5.39	□□□□□ -1.55
SLC38A9-223	ENST00000515629	BACH2	Q9BYV9	841 aa		5.39	□□□□□ -1.55
SLC38A9-223	ENST00000515629	IRF2BPL	Q9H1B7	796 aa		5.39	□□□□□ -1.55
SLC38A9-223	ENST00000515629	COL4A3BP	Q9Y5P4	624 aa		5.39	□□□□□ -1.55
SLC38A9-223	ENST00000515629	CAMSAP2	Q08AD1	1489 aa		5.38	□□□□□ -1.55
SLC38A9-223	ENST00000515629	VWDE	Q8N2E2	1590 aa		5.38	□□□□□ -1.55
SLC38A9-223	ENST00000515629	UGGT1	Q9NYU2	1555 aa		5.38	□□□□□ -1.55
SLC38A9-223	ENST00000515629	NPHP4	O75161	1426 aa	Predicted RBP	5.38	□□□□□ -1.55
SLC38A9-223	ENST00000515629	FXR2	P51116	673 aa	Known RBP eCLIP	5.38	□□□□□ -1.55
SLC38A9-223	ENST00000515629	BIN2	Q9UBW5	565 aa	Predicted RBP	5.38	□□□□□ -1.55
SLC38A9-223	ENST00000515629	MED14	O60244	1454 aa		5.38	□□□□□ -1.55
SLC38A9-223	ENST00000515629	NLRP1	Q9C000	1473 aa		5.38	□□□□□ -1.55
SLC38A9-223	ENST00000515629	FAM135A	Q9P2D6	1515 aa		5.38	□□□□□ -1.55
SLC38A9-223	ENST00000515629	ALK	Q9UM73	1620 aa		5.38	□□□□□ -1.55
SLC38A9-223	ENST00000515629	TSPY4	P0CV99	314 aa		5.38	□□□□□ -1.55
SLC38A9-223	ENST00000515629	TSPY10	P0CW01	314 aa		5.38	□□□□□ -1.55
SLC38A9-223	ENST00000515629	LIG1	P18858	919 aa		5.38	□□□□□ -1.55
SLC38A9-223	ENST00000515629	PLEKHG6	Q3KR16	790 aa		5.38	□□□□□ -1.55
SLC38A9-223	ENST00000515629	PHLDB3	Q6NSJ2	640 aa		5.38	□□□□□ -1.55
SLC38A9-223	ENST00000515629	IFNL1	Q8IU54	200 aa		5.38	□□□□□ -1.55
SLC38A9-223	ENST00000515629	EXOC5	O00471	708 aa		5.37	□□□□□ -1.55
SLC38A9-223	ENST00000515629	POLD1	P28340	1107 aa		5.37	□□□□□ -1.55
SLC38A9-223	ENST00000515629	GYS2	P54840	703 aa		5.37	□□□□□ -1.55
SLC38A9-223	ENST00000515629	EVA1C	P58658	441 aa		5.37	□□□□□ -1.55
SLC38A9-223	ENST00000515629	HDLBP	Q00341	1268 aa	Known RBP	5.37	□□□□□ -1.55
SLC38A9-223	ENST00000515629	JAZF1	Q86VZ6	243 aa		5.37	□□□□□ -1.55
SLC38A9-223	ENST00000515629	FMNL3	Q8IVF7	1028 aa		5.37	□□□□□ -1.55
SLC38A9-223	ENST00000515629	EFCAB3	Q8N7B9	438 aa		5.37	□□□□□ -1.55
SLC38A9-223	ENST00000515629	KIF12	Q96FN5	646 aa		5.37	□□□□□ -1.55
SLC38A9-223	ENST00000515629	ANP32E	Q9BTT0	268 aa		5.37	□□□□□ -1.55
SLC38A9-223	ENST00000515629	CUEDC1	Q9NWM3	386 aa	Predicted RBP	5.37	□□□□□ -1.55
SLC38A9-223	ENST00000515629	GNPAT	O15228	680 aa		5.37	□□□□□ -1.55
SLC38A9-223	ENST00000515629	S100B	P04271	92 aa	Predicted RBP	5.37	□□□□□ -1.55
SLC38A9-223	ENST00000515629	RTL5	Q5HYW3	569 aa	Predicted RBP	5.37	□□□□□ -1.55
SLC38A9-223	ENST00000515629	CCAR1	Q8IX12	1150 aa	Known RBP	5.37	□□□□□ -1.55
SLC38A9-223	ENST00000515629	HELB	Q8NG08	1087 aa	Predicted RBP	5.37	□□□□□ -1.55
SLC38A9-223	ENST00000515629	CXorf38	Q8TB03	319 aa		5.37	□□□□□ -1.55
SLC38A9-223	ENST00000515629	FBXO9	Q9UK97	447 aa	Predicted RBP	5.37	□□□□□ -1.55
SLC38A9-223	ENST00000515629	DEPDC5	O75140	1603 aa		5.36	□□□□□ -1.55
SLC38A9-223	ENST00000515629	STK10	O94804	968 aa	Known RBP	5.36	□□□□□ -1.55
SLC38A9-223	ENST00000515629	B4GALNT3	Q6L9W6	998 aa		5.36	□□□□□ -1.55
SLC38A9-223	ENST00000515629	ZNF280D	Q6N043	979 aa		5.36	□□□□□ -1.55
SLC38A9-223	ENST00000515629	AMOTL1	Q8IY63	956 aa		5.36	□□□□□ -1.55
SLC38A9-223	ENST00000515629	RPUSD2	Q8IZ73	545 aa	Known RBP	5.36	□□□□□ -1.55
SLC38A9-223	ENST00000515629	MRPL42	Q9Y6G3	142 aa	Known RBP	5.36	□□□□□ -1.55
SLC38A9-223	ENST00000515629	LRRC7	Q96NW7	1537 aa		5.36	□□□□□ -1.55
SLC38A9-223	ENST00000515629	ARHGEF5	Q12774	1597 aa		5.36	□□□□□ -1.55

Retrieved 100 of 20,778 RNA–protein pairs in 141.2 ms