RNA–Protein interactions for RNA: ENST00000515174.5

SNF8-214, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 823 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-214ENST00000515174 PLEKHG5O94827 1062 aa13.22□□□□□ -0.29
SNF8-214ENST00000515174 AMPHP49418 695 aa13.22□□□□□ -0.29
SNF8-214ENST00000515174 RARSP54136 660 aaKnown RBP13.22□□□□□ -0.29
SNF8-214ENST00000515174 LMOD2Q6P5Q4 547 aa13.22□□□□□ -0.29
SNF8-214ENST00000515174 UNC5CLQ8IV45 518 aa13.22□□□□□ -0.29
SNF8-214ENST00000515174 CCDC9Q9Y3X0 531 aaKnown RBP13.22□□□□□ -0.29
SNF8-214ENST00000515174 NRAPQ86VF7 1730 aa13.22□□□□□ -0.29
SNF8-214ENST00000515174 IGSF1Q8N6C5 1336 aa13.21□□□□□ -0.29
SNF8-214ENST00000515174 HMOX1P09601 288 aa13.21□□□□□ -0.29
SNF8-214ENST00000515174 ZNF853P0CG23 659 aa13.21□□□□□ -0.29
SNF8-214ENST00000515174 EXOC6Q8TAG9 804 aa13.21□□□□□ -0.29
SNF8-214ENST00000515174 IP6K1Q92551 441 aa13.21□□□□□ -0.29
SNF8-214ENST00000515174 CCDC136Q96JN2 1154 aa13.21□□□□□ -0.29
SNF8-214ENST00000515174 DLG5Q8TDM6 1919 aa13.21□□□□□ -0.3
SNF8-214ENST00000515174 VIRMAQ69YN4 1812 aaKnown RBP13.2□□□□□ -0.3
SNF8-214ENST00000515174 FANCIQ9NVI1 1328 aa13.2□□□□□ -0.3
SNF8-214ENST00000515174 HOXC9P31274 260 aa13.2□□□□□ -0.3
SNF8-214ENST00000515174 BRPF1P55201 1214 aaPredicted RBP13.2□□□□□ -0.3
SNF8-214ENST00000515174 GNAI1P63096 354 aa13.2□□□□□ -0.3
SNF8-214ENST00000515174 SULT6B1Q6IMI4 303 aa13.2□□□□□ -0.3
SNF8-214ENST00000515174 IFT57Q9NWB7 429 aa13.2□□□□□ -0.3
SNF8-214ENST00000515174 COL14A1Q05707 1796 aaKnown RBP13.2□□□□□ -0.3
SNF8-214ENST00000515174 A0A0G2JS52 829 aa13.19□□□□□ -0.3
SNF8-214ENST00000515174 HTATSF1O43719 755 aaKnown RBP13.19□□□□□ -0.3
SNF8-214ENST00000515174 MYT1Q01538 1121 aa13.19□□□□□ -0.3
SNF8-214ENST00000515174 B4GALNT3Q6L9W6 998 aa13.19□□□□□ -0.3
SNF8-214ENST00000515174 SEPT12Q8IYM1 358 aa13.19□□□□□ -0.3
SNF8-214ENST00000515174 PLIN1O60240 522 aa13.18□□□□□ -0.3
SNF8-214ENST00000515174 BCAR3O75815 825 aa13.18□□□□□ -0.3
SNF8-214ENST00000515174 MS4A1P11836 297 aa13.18□□□□□ -0.3
SNF8-214ENST00000515174 ALDH1L2Q3SY69 923 aa13.18□□□□□ -0.3
SNF8-214ENST00000515174 CFAP44Q96MT7 982 aa13.18□□□□□ -0.3
SNF8-214ENST00000515174 PSDA5PKW4 1024 aaPredicted RBP13.17□□□□□ -0.3
SNF8-214ENST00000515174 ARHGEF25Q86VW2 580 aa13.17□□□□□ -0.3
SNF8-214ENST00000515174 CRBNQ96SW2 442 aa13.17□□□□□ -0.3
SNF8-214ENST00000515174 EYA1Q99502 592 aa13.17□□□□□ -0.3
SNF8-214ENST00000515174 GAS2L2Q8NHY3 880 aa13.16□□□□□ -0.3
SNF8-214ENST00000515174 CABLES1Q8TDN4 633 aa13.16□□□□□ -0.3
SNF8-214ENST00000515174 NWD2Q9ULI1 1742 aa13.16□□□□□ -0.3
SNF8-214ENST00000515174 ZBTB7CA1YPR0 619 aa13.15□□□□□ -0.3
SNF8-214ENST00000515174 GCP02774 474 aa13.15□□□□□ -0.3
SNF8-214ENST00000515174 BAG6P46379 1132 aa13.15□□□□□ -0.3
SNF8-214ENST00000515174 EXOSC9Q06265 439 aaKnown RBP13.15□□□□□ -0.3
SNF8-214ENST00000515174 KRT27Q7Z3Y8 459 aa13.15□□□□□ -0.3
SNF8-214ENST00000515174 AEBP1Q8IUX7 1158 aa13.15□□□□□ -0.3
SNF8-214ENST00000515174 C20orf194Q5TEA3 1177 aa13.14□□□□□ -0.31
SNF8-214ENST00000515174 PARP4Q9UKK3 1724 aaKnown RBP13.13□□□□□ -0.31
SNF8-214ENST00000515174 GLI3P10071 1580 aa13.13□□□□□ -0.31
SNF8-214ENST00000515174 KIAA0232Q92628 1395 aa13.13□□□□□ -0.31
SNF8-214ENST00000515174 CHL1O00533 1208 aa13.13□□□□□ -0.31
SNF8-214ENST00000515174 VPS72Q15906 364 aa13.13□□□□□ -0.31
SNF8-214ENST00000515174 TSR2Q969E8 191 aaKnown RBP13.13□□□□□ -0.31
SNF8-214ENST00000515174 BABAM1Q9NWV8 329 aa13.13□□□□□ -0.31
SNF8-214ENST00000515174 SLIT2O94813 1529 aa13.13□□□□□ -0.31
SNF8-214ENST00000515174 NCAPD2Q15021 1401 aa13.13□□□□□ -0.31
SNF8-214ENST00000515174 CPDO75976 1380 aa13.12□□□□□ -0.31
SNF8-214ENST00000515174 PLEKHG2Q9H7P9 1386 aa13.12□□□□□ -0.31
SNF8-214ENST00000515174 TSHZ2Q9NRE2 1034 aa13.12□□□□□ -0.31
SNF8-214ENST00000515174 SHANK3Q9BYB0 1731 aa13.12□□□□□ -0.31
SNF8-214ENST00000515174 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.12□□□□□ -0.31
SNF8-214ENST00000515174 PKD1L3Q7Z443 1732 aa13.11□□□□□ -0.31
SNF8-214ENST00000515174 EP400Q96L91 3159 aa13.11□□□□□ -0.31
SNF8-214ENST00000515174 IPO8O15397 1037 aaKnown RBP13.11□□□□□ -0.31
SNF8-214ENST00000515174 VAMP4O75379 141 aa13.11□□□□□ -0.31
SNF8-214ENST00000515174 ZKSCAN2Q63HK3 967 aa13.11□□□□□ -0.31
SNF8-214ENST00000515174 ARHGAP45Q92619 1136 aa13.11□□□□□ -0.31
SNF8-214ENST00000515174 COL5A2P05997 1499 aaPredicted RBP13.1□□□□□ -0.31
SNF8-214ENST00000515174 ZC3H6P61129 1189 aaKnown RBP13.1□□□□□ -0.31
SNF8-214ENST00000515174 MTHFSDQ2M296 383 aaKnown RBP13.1□□□□□ -0.31
SNF8-214ENST00000515174 SSH1Q8WYL5 1049 aa13.1□□□□□ -0.31
SNF8-214ENST00000515174 MBIPQ9NS73 344 aa13.1□□□□□ -0.31
SNF8-214ENST00000515174 KIF16BQ96L93 1317 aa13.1□□□□□ -0.31
SNF8-214ENST00000515174 LRP5O75197 1615 aa13.1□□□□□ -0.31
SNF8-214ENST00000515174 BRWD3Q6RI45 1802 aa13.09□□□□□ -0.31
SNF8-214ENST00000515174 CRB1P82279 1406 aa13.09□□□□□ -0.31
SNF8-214ENST00000515174 LRRC37A3O60309 1634 aa13.09□□□□□ -0.31
SNF8-214ENST00000515174 SOS1Q07889 1333 aaPredicted RBP13.09□□□□□ -0.31
SNF8-214ENST00000515174 KDM2BQ8NHM5 1336 aa13.09□□□□□ -0.31
SNF8-214ENST00000515174 CHRNA2Q15822 529 aa13.08□□□□□ -0.32
SNF8-214ENST00000515174 FAM98CQ17RN3 349 aaKnown RBP13.08□□□□□ -0.32
SNF8-214ENST00000515174 CENPQQ7L2Z9 268 aaPredicted RBP13.08□□□□□ -0.32
SNF8-214ENST00000515174 RTF1Q92541 710 aaKnown RBP13.08□□□□□ -0.32
SNF8-214ENST00000515174 SMC4Q9NTJ3 1288 aa13.08□□□□□ -0.32
SNF8-214ENST00000515174 GNAT3A8MTJ3 354 aa13.07□□□□□ -0.32
SNF8-214ENST00000515174 CANXP27824 592 aaKnown RBP13.07□□□□□ -0.32
SNF8-214ENST00000515174 EN1Q05925 392 aaPredicted RBP13.07□□□□□ -0.32
SNF8-214ENST00000515174 R3HDM1Q15032 1099 aaKnown RBP13.07□□□□□ -0.32
SNF8-214ENST00000515174 AMOTQ4VCS5 1084 aa13.07□□□□□ -0.32
SNF8-214ENST00000515174 ATF7IPQ6VMQ6 1270 aa13.07□□□□□ -0.32
SNF8-214ENST00000515174 DZIP1LQ8IYY4 767 aaKnown RBP13.07□□□□□ -0.32
SNF8-214ENST00000515174 LTV1Q96GA3 475 aaPredicted RBP13.07□□□□□ -0.32
SNF8-214ENST00000515174 THUMPD2Q9BTF0 503 aaKnown RBP13.07□□□□□ -0.32
SNF8-214ENST00000515174 FAM83GA6ND36 823 aa13.06□□□□□ -0.32
SNF8-214ENST00000515174 ONECUT3O60422 494 aaPredicted RBP13.06□□□□□ -0.32
SNF8-214ENST00000515174 NBPF6Q5VWK0 638 aa13.06□□□□□ -0.32
SNF8-214ENST00000515174 CLUAP1Q96AJ1 413 aa13.06□□□□□ -0.32
SNF8-214ENST00000515174 NBPF4Q96M43 638 aa13.06□□□□□ -0.32
SNF8-214ENST00000515174 TCERG1O14776 1098 aaKnown RBP13.05□□□□□ -0.32
SNF8-214ENST00000515174 MVPQ14764 893 aaKnown RBP13.05□□□□□ -0.32
SNF8-214ENST00000515174 TWISTNBQ3B726 338 aaPredicted RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms