RNA–Protein interactions for RNA: ENST00000514822.1

PHF3-211, Transcript of PHD finger protein 3, humanhuman

TSL 4

Gene PHF3, Length 486 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-211ENST00000514822 USP4Q13107 963 aa9.72□□□□□ -0.85
PHF3-211ENST00000514822 FNBP4Q8N3X1 1017 aaPredicted RBP9.72□□□□□ -0.85
PHF3-211ENST00000514822 INSM2Q96T92 566 aaPredicted RBP9.72□□□□□ -0.85
PHF3-211ENST00000514822 OSBPL3Q9H4L5 887 aa9.72□□□□□ -0.85
PHF3-211ENST00000514822 TRAK2O60296 914 aa9.71□□□□□ -0.86
PHF3-211ENST00000514822 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.71□□□□□ -0.86
PHF3-211ENST00000514822 TSGA10IPQ3SY00 556 aa9.71□□□□□ -0.86
PHF3-211ENST00000514822 PLPP7Q8NBV4 271 aa9.71□□□□□ -0.86
PHF3-211ENST00000514822 SIRT1Q96EB6 747 aa9.71□□□□□ -0.86
PHF3-211ENST00000514822 DNMT3LQ9UJW3 386 aa9.71□□□□□ -0.86
PHF3-211ENST00000514822 CTSOP43234 321 aaPredicted RBP9.7□□□□□ -0.86
PHF3-211ENST00000514822 OXLD1Q5BKU9 147 aa9.7□□□□□ -0.86
PHF3-211ENST00000514822 NXF1Q9UBU9 619 aaKnown RBP9.7□□□□□ -0.86
PHF3-211ENST00000514822 FIGNL2A6NMB9 653 aa9.69□□□□□ -0.86
PHF3-211ENST00000514822 A0A1W2PRU2 124 aa9.68□□□□□ -0.86
PHF3-211ENST00000514822 PIK3CDO00329 1044 aa9.68□□□□□ -0.86
PHF3-211ENST00000514822 TERTO14746 1132 aaKnown RBP9.68□□□□□ -0.86
PHF3-211ENST00000514822 SKIP12755 728 aa9.68□□□□□ -0.86
PHF3-211ENST00000514822 HDGFL1Q5TGJ6 251 aa9.68□□□□□ -0.86
PHF3-211ENST00000514822 ADAMTS19Q8TE59 1207 aa9.68□□□□□ -0.86
PHF3-211ENST00000514822 GTF3C3Q9Y5Q9 886 aa9.68□□□□□ -0.86
PHF3-211ENST00000514822 MEN1O00255 615 aa9.67□□□□□ -0.86
PHF3-211ENST00000514822 GNRH1P01148 92 aa9.67□□□□□ -0.86
PHF3-211ENST00000514822 FOXD4L5Q5VV16 416 aaPredicted RBP9.67□□□□□ -0.86
PHF3-211ENST00000514822 NFATC2IPQ8NCF5 419 aa9.67□□□□□ -0.86
PHF3-211ENST00000514822 RNF217Q8TC41 542 aa9.67□□□□□ -0.86
PHF3-211ENST00000514822 ARHGEF10LQ9HCE6 1279 aa9.67□□□□□ -0.86
PHF3-211ENST00000514822 RNF144AP50876 292 aaPredicted RBP9.66□□□□□ -0.86
PHF3-211ENST00000514822 NPAS3Q8IXF0 933 aa9.66□□□□□ -0.86
PHF3-211ENST00000514822 NLRP3Q96P20 1036 aa9.66□□□□□ -0.86
PHF3-211ENST00000514822 LZTS3O60299 673 aaPredicted RBP9.65□□□□□ -0.86
PHF3-211ENST00000514822 WFS1O76024 890 aa9.65□□□□□ -0.86
PHF3-211ENST00000514822 GPC1P35052 558 aa9.65□□□□□ -0.86
PHF3-211ENST00000514822 NFX1Q12986 1120 aaKnown RBP9.65□□□□□ -0.86
PHF3-211ENST00000514822 CLN3Q13286 438 aa9.65□□□□□ -0.86
PHF3-211ENST00000514822 EML3Q32P44 896 aa9.65□□□□□ -0.86
PHF3-211ENST00000514822 SLC16A10Q8TF71 515 aa9.65□□□□□ -0.86
PHF3-211ENST00000514822 GLMNQ92990 594 aa9.65□□□□□ -0.86
PHF3-211ENST00000514822 TREML4Q6UXN2 200 aa9.64□□□□□ -0.87
PHF3-211ENST00000514822 ESCO1Q5FWF5 840 aa9.63□□□□□ -0.87
PHF3-211ENST00000514822 LYSMD3Q7Z3D4 306 aa9.63□□□□□ -0.87
PHF3-211ENST00000514822 RAB6BQ9NRW1 208 aa9.63□□□□□ -0.87
PHF3-211ENST00000514822 PTSQ03393 145 aa9.62□□□□□ -0.87
PHF3-211ENST00000514822 SLC27A3Q5K4L6 730 aa9.62□□□□□ -0.87
PHF3-211ENST00000514822 CALR3Q96L12 384 aaKnown RBP9.62□□□□□ -0.87
PHF3-211ENST00000514822 UCN2Q96RP3 112 aa9.62□□□□□ -0.87
PHF3-211ENST00000514822 ESYT1Q9BSJ8 1104 aa9.62□□□□□ -0.87
PHF3-211ENST00000514822 USP17L5A8MUK1 530 aa9.61□□□□□ -0.87
PHF3-211ENST00000514822 VEGFBP49765 207 aa9.61□□□□□ -0.87
PHF3-211ENST00000514822 NCOA4Q13772 614 aa9.61□□□□□ -0.87
PHF3-211ENST00000514822 CNKSR1Q969H4 720 aa9.61□□□□□ -0.87
PHF3-211ENST00000514822 NOD1Q9Y239 953 aa9.61□□□□□ -0.87
PHF3-211ENST00000514822 H3BM21 787 aa9.6□□□□□ -0.87
PHF3-211ENST00000514822 ATP9BO43861 1147 aa9.6□□□□□ -0.87
PHF3-211ENST00000514822 IL2RAP01589 272 aa9.6□□□□□ -0.87
PHF3-211ENST00000514822 PRICKLE2Q7Z3G6 844 aa9.6□□□□□ -0.87
PHF3-211ENST00000514822 XAGE2Q96GT9 111 aa9.6□□□□□ -0.87
PHF3-211ENST00000514822 PPFIA3O75145 1194 aa9.59□□□□□ -0.87
PHF3-211ENST00000514822 TBC1D9Q6ZT07 1266 aa9.59□□□□□ -0.87
PHF3-211ENST00000514822 DEPDC4Q8N2C3 294 aa9.59□□□□□ -0.87
PHF3-211ENST00000514822 SLC35F4A4IF30 521 aa9.58□□□□□ -0.88
PHF3-211ENST00000514822 LCE2AQ5TA79 106 aaPredicted RBP9.58□□□□□ -0.88
PHF3-211ENST00000514822 PLEKHM2Q8IWE5 1019 aa9.58□□□□□ -0.88
PHF3-211ENST00000514822 CCDC155Q8N6L0 562 aa9.58□□□□□ -0.88
PHF3-211ENST00000514822 IRF7Q92985 503 aa9.58□□□□□ -0.88
PHF3-211ENST00000514822 GRIP2Q9C0E4 1043 aa9.58□□□□□ -0.88
PHF3-211ENST00000514822 ETNK1Q9HBU6 452 aa9.58□□□□□ -0.88
PHF3-211ENST00000514822 USP17L3A6NCW0 530 aa9.57□□□□□ -0.88
PHF3-211ENST00000514822 USP17L4A6NCW7 530 aa9.57□□□□□ -0.88
PHF3-211ENST00000514822 GDF10P55107 478 aa9.57□□□□□ -0.88
PHF3-211ENST00000514822 CENPCQ03188 943 aa9.57□□□□□ -0.88
PHF3-211ENST00000514822 USP17L2Q6R6M4 530 aa9.57□□□□□ -0.88
PHF3-211ENST00000514822 USP17L1Q7RTZ2 530 aa9.57□□□□□ -0.88
PHF3-211ENST00000514822 ZMYND15Q9H091 742 aa9.57□□□□□ -0.88
PHF3-211ENST00000514822 ZNF777Q9ULD5 760 aaPredicted RBP9.57□□□□□ -0.88
PHF3-211ENST00000514822 HRH3Q9Y5N1 445 aa9.57□□□□□ -0.88
PHF3-211ENST00000514822 STAU1O95793 577 aaKnown RBP9.56□□□□□ -0.88
PHF3-211ENST00000514822 INHAP05111 366 aa9.56□□□□□ -0.88
PHF3-211ENST00000514822 RHOQP17081 205 aa9.56□□□□□ -0.88
PHF3-211ENST00000514822 GTF2E1P29083 439 aaPredicted RBP9.56□□□□□ -0.88
PHF3-211ENST00000514822 GTF2IP78347 998 aa9.56□□□□□ -0.88
PHF3-211ENST00000514822 ZSCAN10Q96SZ4 725 aaPredicted RBP9.56□□□□□ -0.88
PHF3-211ENST00000514822 PCDHGA11Q9Y5H2 935 aa9.56□□□□□ -0.88
PHF3-211ENST00000514822 SPATA31C2B4DYI2 1134 aa9.55□□□□□ -0.88
PHF3-211ENST00000514822 WASLO00401 505 aaPredicted RBP9.55□□□□□ -0.88
PHF3-211ENST00000514822 SCNN1DP51172 638 aa9.55□□□□□ -0.88
PHF3-211ENST00000514822 PSME1Q06323 249 aa9.55□□□□□ -0.88
PHF3-211ENST00000514822 TRIM50Q86XT4 487 aa9.55□□□□□ -0.88
PHF3-211ENST00000514822 POU4F2Q12837 409 aa9.54□□□□□ -0.88
PHF3-211ENST00000514822 TLR1Q15399 786 aa9.54□□□□□ -0.88
PHF3-211ENST00000514822 TAS1R3Q7RTX0 852 aa9.54□□□□□ -0.88
PHF3-211ENST00000514822 TFIP11Q9UBB9 837 aaKnown RBP9.54□□□□□ -0.88
PHF3-211ENST00000514822 SENP3-EIF4A1A0A087X0R7 540 aa9.53□□□□□ -0.88
PHF3-211ENST00000514822 PALM3A6NDB9 673 aaPredicted RBP9.53□□□□□ -0.88
PHF3-211ENST00000514822 ATP1A2P50993 1020 aa9.53□□□□□ -0.88
PHF3-211ENST00000514822 WDR44Q5JSH3 913 aa9.53□□□□□ -0.88
PHF3-211ENST00000514822 TMEM214Q6NUQ4 689 aaKnown RBP9.53□□□□□ -0.88
PHF3-211ENST00000514822 PPP1R12CQ9BZL4 782 aa9.53□□□□□ -0.88
PHF3-211ENST00000514822 FHDC1Q9C0D6 1143 aaPredicted RBP9.53□□□□□ -0.88
PHF3-211ENST00000514822 MAFBQ9Y5Q3 323 aaPredicted RBP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms