RNA–Protein interactions for RNA: ENST00000514484.6

LPCAT1-206, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

TSL 3

Gene LPCAT1, Length 756 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-206ENST00000514484 KCNQ2O43526 872 aa25.96■■□□□ 1.75
LPCAT1-206ENST00000514484 DDX54Q8TDD1 881 aaKnown RBP25.96■■□□□ 1.75
LPCAT1-206ENST00000514484 R3HDM1Q15032 1099 aaKnown RBP25.94■■□□□ 1.74
LPCAT1-206ENST00000514484 KNSTRNQ9Y448 316 aa25.94■■□□□ 1.74
LPCAT1-206ENST00000514484 WASHC2AQ641Q2 1341 aa25.92■■□□□ 1.74
LPCAT1-206ENST00000514484 RAPGEF4Q8WZA2 1011 aa25.91■■□□□ 1.74
LPCAT1-206ENST00000514484 PKD1L3Q7Z443 1732 aa25.91■■□□□ 1.74
LPCAT1-206ENST00000514484 MORC1Q86VD1 984 aa25.9■■□□□ 1.74
LPCAT1-206ENST00000514484 ZCRB1Q8TBF4 217 aaKnown RBP25.9■■□□□ 1.74
LPCAT1-206ENST00000514484 PLSCR1O15162 318 aa25.89■■□□□ 1.74
LPCAT1-206ENST00000514484 NCAPD2Q15021 1401 aa25.88■■□□□ 1.73
LPCAT1-206ENST00000514484 TATP17735 454 aaPredicted RBP25.88■■□□□ 1.73
LPCAT1-206ENST00000514484 AMER1Q5JTC6 1135 aaPredicted RBP25.88■■□□□ 1.73
LPCAT1-206ENST00000514484 LRP5O75197 1615 aa25.87■■□□□ 1.73
LPCAT1-206ENST00000514484 EIF4A2Q14240 407 aaKnown RBP25.86■■□□□ 1.73
LPCAT1-206ENST00000514484 PROM2Q8N271 834 aa25.85■■□□□ 1.73
LPCAT1-206ENST00000514484 EYA1Q99502 592 aa25.85■■□□□ 1.73
LPCAT1-206ENST00000514484 TOGARAM1Q9Y4F4 1720 aa25.83■■□□□ 1.73
LPCAT1-206ENST00000514484 ANO8Q9HCE9 1232 aaPredicted RBP25.83■■□□□ 1.73
LPCAT1-206ENST00000514484 TXNRD1Q16881 649 aa25.82■■□□□ 1.72
LPCAT1-206ENST00000514484 NBPF14Q5TI25 921 aa25.82■■□□□ 1.72
LPCAT1-206ENST00000514484 SYTL4Q96C24 671 aaPredicted RBP25.82■■□□□ 1.72
LPCAT1-206ENST00000514484 PER1O15534 1290 aaPredicted RBP25.81■■□□□ 1.72
LPCAT1-206ENST00000514484 CNGB1Q14028 1251 aaPredicted RBP25.81■■□□□ 1.72
LPCAT1-206ENST00000514484 CC2D1BQ5T0F9 858 aaKnown RBP25.81■■□□□ 1.72
LPCAT1-206ENST00000514484 PCDH11XQ9BZA7 1347 aa25.81■■□□□ 1.72
LPCAT1-206ENST00000514484 PCDH11YQ9BZA8 1340 aa25.81■■□□□ 1.72
LPCAT1-206ENST00000514484 ITGB4P16144 1822 aa25.8■■□□□ 1.72
LPCAT1-206ENST00000514484 PRIM1P49642 420 aaKnown RBP25.8■■□□□ 1.72
LPCAT1-206ENST00000514484 PAPPAQ13219 1627 aa25.78■■□□□ 1.72
LPCAT1-206ENST00000514484 LY75O60449 1722 aa25.77■■□□□ 1.72
LPCAT1-206ENST00000514484 CYP27B1O15528 508 aa25.77■■□□□ 1.72
LPCAT1-206ENST00000514484 CASZ1Q86V15 1759 aa25.77■■□□□ 1.72
LPCAT1-206ENST00000514484 IGSF1Q8N6C5 1336 aa25.76■■□□□ 1.71
LPCAT1-206ENST00000514484 AEBP1Q8IUX7 1158 aa25.71■■□□□ 1.71
LPCAT1-206ENST00000514484 LRRC4BQ9NT99 713 aa25.71■■□□□ 1.71
LPCAT1-206ENST00000514484 SPG7Q9UQ90 795 aa25.71■■□□□ 1.71
LPCAT1-206ENST00000514484 TUBGCP6Q96RT7 1819 aa25.7■■□□□ 1.71
LPCAT1-206ENST00000514484 MTHFSP49914 203 aa25.7■■□□□ 1.7
LPCAT1-206ENST00000514484 NPC1L1Q9UHC9 1359 aa25.69■■□□□ 1.7
LPCAT1-206ENST00000514484 KCNQ4P56696 695 aa25.69■■□□□ 1.7
LPCAT1-206ENST00000514484 PDGFDQ9GZP0 370 aaPredicted RBP25.69■■□□□ 1.7
LPCAT1-206ENST00000514484 STK32BQ9NY57 414 aa25.69■■□□□ 1.7
LPCAT1-206ENST00000514484 IL13P35225 146 aa25.67■■□□□ 1.7
LPCAT1-206ENST00000514484 SLC15A2Q16348 729 aa25.66■■□□□ 1.7
LPCAT1-206ENST00000514484 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.66■■□□□ 1.73e-9■■□□□ 13.2
LPCAT1-206ENST00000514484 PHKG2P15735 406 aa25.65■■□□□ 1.7
LPCAT1-206ENST00000514484 ZNF827Q17R98 1081 aa25.65■■□□□ 1.7
LPCAT1-206ENST00000514484 MPRIPQ6WCQ1 1025 aa25.65■■□□□ 1.7
LPCAT1-206ENST00000514484 SULT6B1Q6IMI4 303 aa25.64■■□□□ 1.7
LPCAT1-206ENST00000514484 TAF1LQ8IZX4 1826 aa25.64■■□□□ 1.7
LPCAT1-206ENST00000514484 C5P01031 1676 aa25.64■■□□□ 1.69
LPCAT1-206ENST00000514484 NKX1-1Q15270 411 aaPredicted RBP25.63■■□□□ 1.69
LPCAT1-206ENST00000514484 SLC27A3Q5K4L6 730 aa25.63■■□□□ 1.69
LPCAT1-206ENST00000514484 QSER1Q2KHR3 1735 aa25.63■■□□□ 1.69
LPCAT1-206ENST00000514484 COL3A1P02461 1466 aaPredicted RBP25.62■■□□□ 1.69
LPCAT1-206ENST00000514484 IFNL2Q8IZJ0 200 aa25.62■■□□□ 1.69
LPCAT1-206ENST00000514484 VIRMAQ69YN4 1812 aaKnown RBP25.61■■□□□ 1.69
LPCAT1-206ENST00000514484 KDRP35968 1356 aa25.61■■□□□ 1.69
LPCAT1-206ENST00000514484 PLEKHG2Q9H7P9 1386 aa25.61■■□□□ 1.69
LPCAT1-206ENST00000514484 CCNL1Q9UK58 526 aaPredicted RBP25.61■■□□□ 1.69
LPCAT1-206ENST00000514484 PALLDQ8WX93 1383 aa25.6■■□□□ 1.69
LPCAT1-206ENST00000514484 ZBTB7AO95365 584 aa25.6■■□□□ 1.69
LPCAT1-206ENST00000514484 PLEKHO1Q53GL0 409 aaPredicted RBP25.59■■□□□ 1.69
LPCAT1-206ENST00000514484 ZNF530Q6P9A1 599 aaPredicted RBP25.59■■□□□ 1.69
LPCAT1-206ENST00000514484 PIGBQ92521 554 aa25.59■■□□□ 1.69
LPCAT1-206ENST00000514484 HMOX1P09601 288 aa25.58■■□□□ 1.69
LPCAT1-206ENST00000514484 SPON1Q9HCB6 807 aa25.58■■□□□ 1.69
LPCAT1-206ENST00000514484 KDM6AO15550 1401 aaPredicted RBP25.57■■□□□ 1.68
LPCAT1-206ENST00000514484 DIAPH1O60610 1272 aaKnown RBP25.57■■□□□ 1.68
LPCAT1-206ENST00000514484 AKT1S1Q96B36 256 aa25.57■■□□□ 1.68
LPCAT1-206ENST00000514484 TMOD3Q9NYL9 352 aa25.56■■□□□ 1.68
LPCAT1-206ENST00000514484 SCN11AQ9UI33 1791 aa25.56■■□□□ 1.68
LPCAT1-206ENST00000514484 AMOTQ4VCS5 1084 aa25.54■■□□□ 1.68
LPCAT1-206ENST00000514484 ATF5Q9Y2D1 282 aaPredicted RBP25.54■■□□□ 1.68
LPCAT1-206ENST00000514484 C4BP0C0L5 1744 aa25.52■■□□□ 1.68
LPCAT1-206ENST00000514484 C1orf141Q5JVX7 400 aa25.52■■□□□ 1.68
LPCAT1-206ENST00000514484 SMARCC1Q92922 1105 aaPredicted RBP25.51■■□□□ 1.67
LPCAT1-206ENST00000514484 TFCP2L1Q9NZI6 479 aa25.51■■□□□ 1.67
LPCAT1-206ENST00000514484 PPP1R1BQ9UD71 204 aaPredicted RBP25.51■■□□□ 1.67
LPCAT1-206ENST00000514484 ASAP1Q9ULH1 1129 aa25.51■■□□□ 1.67
LPCAT1-206ENST00000514484 PNPLA7Q6ZV29 1317 aa25.51■■□□□ 1.67
LPCAT1-206ENST00000514484 HSP90AB1P08238 724 aaKnown RBP25.5■■□□□ 1.67
LPCAT1-206ENST00000514484 DCAF5Q96JK2 942 aa25.5■■□□□ 1.67
LPCAT1-206ENST00000514484 U2SURPO15042 1029 aaKnown RBP25.49■■□□□ 1.67
LPCAT1-206ENST00000514484 PPP2R1AP30153 589 aa25.48■■□□□ 1.67
LPCAT1-206ENST00000514484 PTGER2P43116 358 aa25.48■■□□□ 1.67
LPCAT1-206ENST00000514484 MTFR1LQ9H019 292 aa25.48■■□□□ 1.67
LPCAT1-206ENST00000514484 UBR3Q6ZT12 1888 aa25.48■■□□□ 1.67
LPCAT1-206ENST00000514484 ERVV-2B6SEH9 535 aa25.46■■□□□ 1.67
LPCAT1-206ENST00000514484 ATG3Q9NT62 314 aa25.46■■□□□ 1.67
LPCAT1-206ENST00000514484 LOC102724428A0A0B4J2F2 783 aa25.45■■□□□ 1.66
LPCAT1-206ENST00000514484 SIK1P57059 783 aa25.45■■□□□ 1.66
LPCAT1-206ENST00000514484 CABP4P57796 275 aa25.44■■□□□ 1.66
LPCAT1-206ENST00000514484 CFAP53Q96M91 514 aa25.44■■□□□ 1.66
LPCAT1-206ENST00000514484 COL24A1Q17RW2 1714 aa25.43■■□□□ 1.66
LPCAT1-206ENST00000514484 MTHFSDQ2M296 383 aaKnown RBP25.43■■□□□ 1.66
LPCAT1-206ENST00000514484 AKAP4Q5JQC9 854 aa25.42■■□□□ 1.66
LPCAT1-206ENST00000514484 LINC00116Q8NCU8 138 aa25.42■■□□□ 1.66
LPCAT1-206ENST00000514484 COL5A3P25940 1745 aaPredicted RBP25.42■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms