RNA–Protein interactions for RNA: ENST00000513757.5

LPCAT1-205, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

TSL 4

Gene LPCAT1, Length 547 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-205ENST00000513757 HOXC9P31274 260 aa13.79□□□□□ -0.2
LPCAT1-205ENST00000513757 PRIM1P49642 420 aaKnown RBP13.79□□□□□ -0.2
LPCAT1-205ENST00000513757 ZCRB1Q8TBF4 217 aaKnown RBP13.79□□□□□ -0.2
LPCAT1-205ENST00000513757 RTL1A6NKG5 1358 aa13.79□□□□□ -0.2
LPCAT1-205ENST00000513757 NSD2O96028 1365 aa13.79□□□□□ -0.2
LPCAT1-205ENST00000513757 SHANK3Q9BYB0 1731 aa13.78□□□□□ -0.2
LPCAT1-205ENST00000513757 AMPHP49418 695 aa13.78□□□□□ -0.2
LPCAT1-205ENST00000513757 SYTL4Q96C24 671 aaPredicted RBP13.78□□□□□ -0.2
LPCAT1-205ENST00000513757 MEGF6O75095 1541 aa13.77□□□□□ -0.21
LPCAT1-205ENST00000513757 CGNL1Q0VF96 1302 aa13.77□□□□□ -0.21
LPCAT1-205ENST00000513757 KLHL34Q8N239 644 aa13.77□□□□□ -0.21
LPCAT1-205ENST00000513757 TONSLQ96HA7 1378 aa13.77□□□□□ -0.21
LPCAT1-205ENST00000513757 TESK2Q96S53 571 aa13.77□□□□□ -0.21
LPCAT1-205ENST00000513757 RGPD2P0DJD1 1756 aa13.76□□□□□ -0.21
LPCAT1-205ENST00000513757 HMGB2P26583 209 aaKnown RBP13.76□□□□□ -0.21
LPCAT1-205ENST00000513757 CCNL1Q9UK58 526 aaPredicted RBP13.76□□□□□ -0.21
LPCAT1-205ENST00000513757 USP47Q96K76 1375 aa13.75□□□□□ -0.21
LPCAT1-205ENST00000513757 GRIN3BO60391 1043 aa13.75□□□□□ -0.21
LPCAT1-205ENST00000513757 KCNQ4P56696 695 aa13.75□□□□□ -0.21
LPCAT1-205ENST00000513757 GIGYF1O75420 1035 aaPredicted RBP13.74□□□□□ -0.21
LPCAT1-205ENST00000513757 PELP1Q8IZL8 1130 aaKnown RBP13.74□□□□□ -0.21
LPCAT1-205ENST00000513757 NLGN2Q8NFZ4 835 aa13.74□□□□□ -0.21
LPCAT1-205ENST00000513757 SMG6Q86US8 1419 aaKnown RBP13.73□□□□□ -0.21
LPCAT1-205ENST00000513757 ST20-MTHFSA0A0A6YYL1 179 aa13.73□□□□□ -0.21
LPCAT1-205ENST00000513757 RAPGEF4Q8WZA2 1011 aa13.73□□□□□ -0.21
LPCAT1-205ENST00000513757 FBLN1P23142 703 aa13.72□□□□□ -0.21
LPCAT1-205ENST00000513757 NBPF6Q5VWK0 638 aa13.72□□□□□ -0.21
LPCAT1-205ENST00000513757 COL23A1Q86Y22 540 aaPredicted RBP13.72□□□□□ -0.21
LPCAT1-205ENST00000513757 FLAD1Q8NFF5 587 aa13.72□□□□□ -0.21
LPCAT1-205ENST00000513757 NBPF4Q96M43 638 aa13.72□□□□□ -0.21
LPCAT1-205ENST00000513757 MSH5O43196 834 aa13.71□□□□□ -0.21
LPCAT1-205ENST00000513757 TATP17735 454 aaPredicted RBP13.71□□□□□ -0.21
LPCAT1-205ENST00000513757 C5P01031 1676 aa13.71□□□□□ -0.21
LPCAT1-205ENST00000513757 KIF24Q5T7B8 1368 aa13.71□□□□□ -0.22
LPCAT1-205ENST00000513757 PCDH11XQ9BZA7 1347 aa13.7□□□□□ -0.22
LPCAT1-205ENST00000513757 PCDH11YQ9BZA8 1340 aa13.7□□□□□ -0.22
LPCAT1-205ENST00000513757 TAF1LQ8IZX4 1826 aa13.7□□□□□ -0.22
LPCAT1-205ENST00000513757 FYB1O15117 783 aa13.7□□□□□ -0.22
LPCAT1-205ENST00000513757 YBX3P16989 372 aaKnown RBP eCLIP13.7□□□□□ -0.22
LPCAT1-205ENST00000513757 RRS1Q15050 365 aaKnown RBP13.7□□□□□ -0.22
LPCAT1-205ENST00000513757 INSRP06213 1382 aa13.7□□□□□ -0.22
LPCAT1-205ENST00000513757 CD2APQ9Y5K6 639 aa13.69□□□□□ -0.22
LPCAT1-205ENST00000513757 PALLDQ8WX93 1383 aa13.69□□□□□ -0.22
LPCAT1-205ENST00000513757 GOLGB1Q14789 3259 aaKnown RBP13.68□□□□□ -0.22
LPCAT1-205ENST00000513757 USHBP1Q8N6Y0 703 aa13.68□□□□□ -0.22
LPCAT1-205ENST00000513757 GGNBP2Q9H3C7 697 aa13.68□□□□□ -0.22
LPCAT1-205ENST00000513757 FLT4P35916 1363 aa13.68□□□□□ -0.22
LPCAT1-205ENST00000513757 TMF1P82094 1093 aa13.67□□□□□ -0.22
LPCAT1-205ENST00000513757 MSL1Q68DK7 614 aa13.67□□□□□ -0.22
LPCAT1-205ENST00000513757 SMARCC1Q92922 1105 aaPredicted RBP13.67□□□□□ -0.22
LPCAT1-205ENST00000513757 KIF20BQ96Q89 1820 aa13.67□□□□□ -0.22
LPCAT1-205ENST00000513757 NSD3Q9BZ95 1437 aa13.66□□□□□ -0.22
LPCAT1-205ENST00000513757 HSP90AB2PQ58FF8 381 aa13.66□□□□□ -0.22
LPCAT1-205ENST00000513757 ITGB4P16144 1822 aa13.66□□□□□ -0.22
LPCAT1-205ENST00000513757 ATP10DQ9P241 1426 aa13.65□□□□□ -0.22
LPCAT1-205ENST00000513757 C4BP0C0L5 1744 aa13.65□□□□□ -0.22
LPCAT1-205ENST00000513757 PKD1L3Q7Z443 1732 aa13.65□□□□□ -0.22
LPCAT1-205ENST00000513757 CYP27B1O15528 508 aa13.65□□□□□ -0.22
LPCAT1-205ENST00000513757 MPRIPQ6WCQ1 1025 aa13.65□□□□□ -0.22
LPCAT1-205ENST00000513757 NCAPD2Q15021 1401 aa13.64□□□□□ -0.23
LPCAT1-205ENST00000513757 TOGARAM1Q9Y4F4 1720 aa13.64□□□□□ -0.23
LPCAT1-205ENST00000513757 CDCA8Q53HL2 280 aa13.64□□□□□ -0.23
LPCAT1-205ENST00000513757 UBR3Q6ZT12 1888 aa13.63□□□□□ -0.23
LPCAT1-205ENST00000513757 ADCY9O60503 1353 aa13.63□□□□□ -0.23
LPCAT1-205ENST00000513757 AK7Q96M32 723 aa13.63□□□□□ -0.23
LPCAT1-205ENST00000513757 NKX1-1Q15270 411 aaPredicted RBP13.62□□□□□ -0.23
LPCAT1-205ENST00000513757 MAP2P11137 1827 aaKnown RBP13.62□□□□□ -0.23
LPCAT1-205ENST00000513757 SSFA2P28290 1259 aa13.61□□□□□ -0.23
LPCAT1-205ENST00000513757 PIGBQ92521 554 aa13.61□□□□□ -0.23
LPCAT1-205ENST00000513757 GPBP1L1Q9HC44 474 aaPredicted RBP13.61□□□□□ -0.23
LPCAT1-205ENST00000513757 CEP350Q5VT06 3117 aa13.61□□□□□ -0.23
LPCAT1-205ENST00000513757 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.6□□□□□ -0.23
LPCAT1-205ENST00000513757 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.6□□□□□ -0.233e-9■■□□□ 13.2
LPCAT1-205ENST00000513757 ANKRD26Q9UPS8 1709 aa13.6□□□□□ -0.23
LPCAT1-205ENST00000513757 SPG7Q9UQ90 795 aa13.6□□□□□ -0.23
LPCAT1-205ENST00000513757 LOC102724428A0A0B4J2F2 783 aa13.59□□□□□ -0.23
LPCAT1-205ENST00000513757 SIK1P57059 783 aa13.59□□□□□ -0.23
LPCAT1-205ENST00000513757 IFFO2Q5TF58 517 aa13.59□□□□□ -0.23
LPCAT1-205ENST00000513757 AMIGO3Q86WK7 504 aa13.59□□□□□ -0.23
LPCAT1-205ENST00000513757 EMILIN1Q9Y6C2 1016 aa13.59□□□□□ -0.23
LPCAT1-205ENST00000513757 IGSF1Q8N6C5 1336 aa13.59□□□□□ -0.23
LPCAT1-205ENST00000513757 PLEKHG2Q9H7P9 1386 aa13.58□□□□□ -0.23
LPCAT1-205ENST00000513757 CARD14Q9BXL6 1004 aa13.58□□□□□ -0.24
LPCAT1-205ENST00000513757 WASHC2AQ641Q2 1341 aa13.58□□□□□ -0.24
LPCAT1-205ENST00000513757 PHF14O94880 888 aa13.57□□□□□ -0.24
LPCAT1-205ENST00000513757 HSPA6P17066 643 aa13.57□□□□□ -0.24
LPCAT1-205ENST00000513757 TMOD3Q9NYL9 352 aa13.57□□□□□ -0.24
LPCAT1-205ENST00000513757 LINC00116Q8NCU8 138 aa13.56□□□□□ -0.24
LPCAT1-205ENST00000513757 CICQ96RK0 1608 aaPredicted RBP13.56□□□□□ -0.24
LPCAT1-205ENST00000513757 IFNL2Q8IZJ0 200 aa13.55□□□□□ -0.24
LPCAT1-205ENST00000513757 EYA1Q99502 592 aa13.55□□□□□ -0.24
LPCAT1-205ENST00000513757 GNPATO15228 680 aa13.54□□□□□ -0.24
LPCAT1-205ENST00000513757 PPM1GO15355 546 aaPredicted RBP13.54□□□□□ -0.24
LPCAT1-205ENST00000513757 PHKG2P15735 406 aa13.54□□□□□ -0.24
LPCAT1-205ENST00000513757 ITPK1Q13572 414 aa13.54□□□□□ -0.24
LPCAT1-205ENST00000513757 SMIM5Q71RC9 77 aa13.54□□□□□ -0.24
LPCAT1-205ENST00000513757 ASAP1Q9ULH1 1129 aa13.54□□□□□ -0.24
LPCAT1-205ENST00000513757 KIF13BQ9NQT8 1826 aa13.54□□□□□ -0.24
LPCAT1-205ENST00000513757 ZNF831Q5JPB2 1677 aa13.53□□□□□ -0.24
LPCAT1-205ENST00000513757 ATP6V1AP38606 617 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms