RNA–Protein interactions for RNA: ENST00000513757.5

LPCAT1-205, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

TSL 4

Gene LPCAT1, Length 547 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-205ENST00000513757 NISCHQ9Y2I1 1504 aa24.8■■□□□ 1.56
LPCAT1-205ENST00000513757 ABCC9O60706 1549 aa22.47■■□□□ 1.19
LPCAT1-205ENST00000513757 CCDC180Q9P1Z9 1646 aa22.37■■□□□ 1.17
LPCAT1-205ENST00000513757 RB1CC1Q8TDY2 1594 aa21.36■■□□□ 1.01
LPCAT1-205ENST00000513757 DNAJC5BQ9UF47 199 aa21.22■□□□□ 0.99
LPCAT1-205ENST00000513757 NACADO15069 1562 aa21.19■□□□□ 0.98
LPCAT1-205ENST00000513757 DCAF8L2P0C7V8 631 aa20.92■□□□□ 0.94
LPCAT1-205ENST00000513757 MYO15BQ96JP2 1530 aa20.88■□□□□ 0.93
LPCAT1-205ENST00000513757 PABPN1Q86U42 306 aaKnown RBP eCLIP20.86■□□□□ 0.93
LPCAT1-205ENST00000513757 UNC13AQ9UPW8 1703 aa20.85■□□□□ 0.93
LPCAT1-205ENST00000513757 BICRAQ9NZM4 1560 aa20.73■□□□□ 0.91
LPCAT1-205ENST00000513757 DCAF1Q9Y4B6 1507 aa20.53■□□□□ 0.88
LPCAT1-205ENST00000513757 ZCCHC6Q5VYS8 1495 aaKnown RBP20.52■□□□□ 0.88
LPCAT1-205ENST00000513757 SHROOM4Q9ULL8 1493 aa20.52■□□□□ 0.88
LPCAT1-205ENST00000513757 CC2D2AQ9P2K1 1620 aa20.31■□□□□ 0.84
LPCAT1-205ENST00000513757 SCRIBQ14160 1630 aa20.3■□□□□ 0.84
LPCAT1-205ENST00000513757 CECR2Q9BXF3 1484 aa20.3■□□□□ 0.84
LPCAT1-205ENST00000513757 EIF4G1Q04637 1599 aaKnown RBP20.24■□□□□ 0.83
LPCAT1-205ENST00000513757 DNAJC5Q9H3Z4 198 aa19.68■□□□□ 0.74
LPCAT1-205ENST00000513757 NCAPD3P42695 1498 aa19.55■□□□□ 0.72
LPCAT1-205ENST00000513757 CUX2O14529 1486 aa19.51■□□□□ 0.71
LPCAT1-205ENST00000513757 ATAD2BQ9ULI0 1458 aa19.45■□□□□ 0.7
LPCAT1-205ENST00000513757 ERCC6Q03468 1493 aa19.44■□□□□ 0.7
LPCAT1-205ENST00000513757 SMARCA2P51531 1590 aa19.41■□□□□ 0.7
LPCAT1-205ENST00000513757 HMGXB3Q12766 1538 aa19.41■□□□□ 0.7
LPCAT1-205ENST00000513757 SMARCA4P51532 1647 aa19.38■□□□□ 0.69
LPCAT1-205ENST00000513757 BAZ1AQ9NRL2 1556 aaPredicted RBP19.28■□□□□ 0.68
LPCAT1-205ENST00000513757 BAZ1BQ9UIG0 1483 aaKnown RBP19.25■□□□□ 0.67
LPCAT1-205ENST00000513757 NESP48681 1621 aa19.25■□□□□ 0.67
LPCAT1-205ENST00000513757 PEG3Q9GZU2 1588 aa19.23■□□□□ 0.67
LPCAT1-205ENST00000513757 LAMC3Q9Y6N6 1575 aa19.15■□□□□ 0.66
LPCAT1-205ENST00000513757 THOC2Q8NI27 1593 aaKnown RBP19.13■□□□□ 0.65
LPCAT1-205ENST00000513757 MROH2BQ7Z745 1585 aa19.08■□□□□ 0.65
LPCAT1-205ENST00000513757 PDS5BQ9NTI5 1447 aa19.04■□□□□ 0.64
LPCAT1-205ENST00000513757 KIF21AQ7Z4S6 1674 aa19.01■□□□□ 0.63
LPCAT1-205ENST00000513757 CADPSQ9ULU8 1353 aa18.94■□□□□ 0.62
LPCAT1-205ENST00000513757 MRC2Q9UBG0 1479 aa18.88■□□□□ 0.61
LPCAT1-205ENST00000513757 WDR62O43379 1518 aa18.84■□□□□ 0.61
LPCAT1-205ENST00000513757 WIZO95785 1651 aa18.83■□□□□ 0.61
LPCAT1-205ENST00000513757 CEP164Q9UPV0 1460 aa18.76■□□□□ 0.59
LPCAT1-205ENST00000513757 FANCD2Q9BXW9 1451 aa18.71■□□□□ 0.59
LPCAT1-205ENST00000513757 CFTRP13569 1480 aa18.69■□□□□ 0.58
LPCAT1-205ENST00000513757 TRIM41Q8WV44 630 aa18.67■□□□□ 0.58
LPCAT1-205ENST00000513757 RSF1Q96T23 1441 aaPredicted RBP18.63■□□□□ 0.57
LPCAT1-205ENST00000513757 TOP2AP11388 1531 aaKnown RBP18.62■□□□□ 0.57
LPCAT1-205ENST00000513757 URB2Q14146 1524 aaKnown RBP18.56■□□□□ 0.56
LPCAT1-205ENST00000513757 OSCARQ8IYS5 282 aa18.55■□□□□ 0.56
LPCAT1-205ENST00000513757 PRDM2Q13029 1718 aa18.49■□□□□ 0.55
LPCAT1-205ENST00000513757 IFT140Q96RY7 1462 aa18.4■□□□□ 0.54
LPCAT1-205ENST00000513757 CCDC88BA6NC98 1476 aa18.39■□□□□ 0.53
LPCAT1-205ENST00000513757 ZNF608Q9ULD9 1512 aaPredicted RBP18.35■□□□□ 0.53
LPCAT1-205ENST00000513757 TOPBP1Q92547 1522 aa18.33■□□□□ 0.53
LPCAT1-205ENST00000513757 RIMBP3CA6NJZ7 1639 aa18.33■□□□□ 0.52
LPCAT1-205ENST00000513757 RIMBP3BA6NNM3 1639 aa18.33■□□□□ 0.52
LPCAT1-205ENST00000513757 RIMBP3Q9UFD9 1639 aa18.33■□□□□ 0.52
LPCAT1-205ENST00000513757 ABCC8Q09428 1581 aa18.33■□□□□ 0.52
LPCAT1-205ENST00000513757 DNMBPQ6XZF7 1577 aa18.27■□□□□ 0.52
LPCAT1-205ENST00000513757 ARHGEF11O15085 1522 aa18.26■□□□□ 0.51
LPCAT1-205ENST00000513757 EIF4G3O43432 1585 aaKnown RBP18.25■□□□□ 0.51
LPCAT1-205ENST00000513757 TARBP1Q13395 1621 aaKnown RBP18.2■□□□□ 0.5
LPCAT1-205ENST00000513757 AQRO60306 1485 aaKnown RBP eCLIP18.15■□□□□ 0.52e-8■■■■■ 35
LPCAT1-205ENST00000513757 CHD1O14646 1710 aa18.15■□□□□ 0.5
LPCAT1-205ENST00000513757 POLA1P09884 1462 aaPredicted RBP18.14■□□□□ 0.5
LPCAT1-205ENST00000513757 CYB5RLQ6IPT4 315 aa18.1■□□□□ 0.49
LPCAT1-205ENST00000513757 ARAP1Q96P48 1450 aa18.07■□□□□ 0.48
LPCAT1-205ENST00000513757 WDR97A6NE52 1622 aa18.05■□□□□ 0.48
LPCAT1-205ENST00000513757 FBLN2P98095 1184 aa18.05■□□□□ 0.48
LPCAT1-205ENST00000513757 SOGA1O94964 1423 aa18.05■□□□□ 0.48
LPCAT1-205ENST00000513757 RAD54L2Q9Y4B4 1467 aa18.04■□□□□ 0.48
LPCAT1-205ENST00000513757 TDRD9Q8NDG6 1382 aaKnown RBP18.02■□□□□ 0.47
LPCAT1-205ENST00000513757 FGD5Q6ZNL6 1462 aa17.99■□□□□ 0.47
LPCAT1-205ENST00000513757 SNAPC4Q5SXM2 1469 aa17.98■□□□□ 0.47
LPCAT1-205ENST00000513757 MAGI1Q96QZ7 1491 aaPredicted RBP17.97■□□□□ 0.47
LPCAT1-205ENST00000513757 CLASP1Q7Z460 1538 aa17.96■□□□□ 0.47
LPCAT1-205ENST00000513757 TRHP20396 242 aaPredicted RBP17.95■□□□□ 0.46
LPCAT1-205ENST00000513757 CUX1P39880 1505 aa17.94■□□□□ 0.46
LPCAT1-205ENST00000513757 SYNJ1O43426 1573 aa17.94■□□□□ 0.46
LPCAT1-205ENST00000513757 GRIN2BQ13224 1484 aa17.94■□□□□ 0.46
LPCAT1-205ENST00000513757 CHMP7Q8WUX9 453 aaPredicted RBP17.92■□□□□ 0.46
LPCAT1-205ENST00000513757 SYNJ2O15056 1496 aa17.9■□□□□ 0.46
LPCAT1-205ENST00000513757 GAPVD1Q14C86 1478 aa17.83■□□□□ 0.45
LPCAT1-205ENST00000513757 PBRM1Q86U86 1689 aa17.83■□□□□ 0.44
LPCAT1-205ENST00000513757 ABCA10Q8WWZ4 1543 aa17.8■□□□□ 0.44
LPCAT1-205ENST00000513757 ABCA5Q8WWZ7 1642 aa17.79■□□□□ 0.44
LPCAT1-205ENST00000513757 GRIN2AQ12879 1464 aa17.69■□□□□ 0.42
LPCAT1-205ENST00000513757 WRNQ14191 1432 aaPredicted RBP eCLIP17.69■□□□□ 0.42
LPCAT1-205ENST00000513757 ADAMTS12P58397 1594 aa17.66■□□□□ 0.42
LPCAT1-205ENST00000513757 NUP160Q12769 1436 aa17.65■□□□□ 0.42
LPCAT1-205ENST00000513757 TOP2BQ02880 1626 aa17.63■□□□□ 0.41
LPCAT1-205ENST00000513757 BIVM-ERCC5R4GMW8 1640 aa17.63■□□□□ 0.41
LPCAT1-205ENST00000513757 CEP170Q5SW79 1584 aa17.62■□□□□ 0.41
LPCAT1-205ENST00000513757 FHAD1B1AJZ9 1412 aa17.62■□□□□ 0.41
LPCAT1-205ENST00000513757 ERCC6L2Q5T890 1561 aa17.62■□□□□ 0.41
LPCAT1-205ENST00000513757 SHROOM2Q13796 1616 aa17.61■□□□□ 0.41
LPCAT1-205ENST00000513757 SUPT5HO00267 1087 aaKnown RBP17.6■□□□□ 0.41
LPCAT1-205ENST00000513757 ERICH3Q5RHP9 1530 aa17.58■□□□□ 0.41
LPCAT1-205ENST00000513757 AEBP2Q6ZN18 517 aaPredicted RBP17.58■□□□□ 0.4
LPCAT1-205ENST00000513757 PRG4Q92954 1404 aaPredicted RBP17.47■□□□□ 0.39
LPCAT1-205ENST00000513757 KIF13AQ9H1H9 1805 aa17.44■□□□□ 0.38
LPCAT1-205ENST00000513757 JPH4Q96JJ6 628 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 158 ms