RNA–Protein interactions for RNA: ENST00000509093.5

COPS4-206, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 2 BASIC

Gene COPS4, Length 2,273 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-206ENST00000509093 ARHGEF10O15013 1369 aa14.15□□□□□ -0.14
COPS4-206ENST00000509093 SLIT3O75094 1523 aa14.15□□□□□ -0.14
COPS4-206ENST00000509093 LTN1O94822 1766 aa14.15□□□□□ -0.14
COPS4-206ENST00000509093 PXDNQ92626 1479 aa14.15□□□□□ -0.14
COPS4-206ENST00000509093 NPHP3Q7Z494 1330 aa14.15□□□□□ -0.14
COPS4-206ENST00000509093 IGSF1Q8N6C5 1336 aa14.15□□□□□ -0.14
COPS4-206ENST00000509093 BCAR3O75815 825 aa14.15□□□□□ -0.14
COPS4-206ENST00000509093 XRCC6P12956 609 aaKnown RBP eCLIP14.15□□□□□ -0.14
COPS4-206ENST00000509093 CABLES1Q8TDN4 633 aa14.15□□□□□ -0.14
COPS4-206ENST00000509093 ALS2Q96Q42 1657 aa14.14□□□□□ -0.15
COPS4-206ENST00000509093 KIF24Q5T7B8 1368 aa14.14□□□□□ -0.15
COPS4-206ENST00000509093 DCTN1Q14203 1278 aa14.14□□□□□ -0.15
COPS4-206ENST00000509093 ARHGEF25Q86VW2 580 aa14.14□□□□□ -0.15
COPS4-206ENST00000509093 USHBP1Q8N6Y0 703 aa14.14□□□□□ -0.15
COPS4-206ENST00000509093 SLKQ9H2G2 1235 aaPredicted RBP14.14□□□□□ -0.15
COPS4-206ENST00000509093 MED1Q15648 1581 aaPredicted RBP14.14□□□□□ -0.15
COPS4-206ENST00000509093 RTL1A6NKG5 1358 aa14.13□□□□□ -0.15
COPS4-206ENST00000509093 ZC3H6P61129 1189 aaKnown RBP14.13□□□□□ -0.15
COPS4-206ENST00000509093 MYH16Q9H6N6 1097 aa14.13□□□□□ -0.15
COPS4-206ENST00000509093 AXIN2Q9Y2T1 843 aa14.12□□□□□ -0.15
COPS4-206ENST00000509093 KDRP35968 1356 aa14.11□□□□□ -0.15
COPS4-206ENST00000509093 SPATA31A3Q5VYP0 1347 aa14.11□□□□□ -0.15
COPS4-206ENST00000509093 LRRC59Q96AG4 307 aaKnown RBP14.11□□□□□ -0.15
COPS4-206ENST00000509093 IL16Q14005 1332 aa14.11□□□□□ -0.15
COPS4-206ENST00000509093 EXOSC9Q06265 439 aaKnown RBP14.11□□□□□ -0.15
COPS4-206ENST00000509093 MTHFSDQ2M296 383 aaKnown RBP14.11□□□□□ -0.15
COPS4-206ENST00000509093 NBPF6Q5VWK0 638 aa14.11□□□□□ -0.15
COPS4-206ENST00000509093 NBPF4Q96M43 638 aa14.11□□□□□ -0.15
COPS4-206ENST00000509093 TNS3Q68CZ2 1445 aa14.11□□□□□ -0.15
COPS4-206ENST00000509093 DLG5Q8TDM6 1919 aa14.1□□□□□ -0.15
COPS4-206ENST00000509093 SEC24BO95487 1268 aa14.09□□□□□ -0.15
COPS4-206ENST00000509093 RARSP54136 660 aaKnown RBP14.09□□□□□ -0.15
COPS4-206ENST00000509093 MCM10Q7L590 875 aa14.09□□□□□ -0.15
COPS4-206ENST00000509093 BCL2L13Q9BXK5 485 aa14.09□□□□□ -0.15
COPS4-206ENST00000509093 PANK2Q9BZ23 570 aa14.08□□□□□ -0.16
COPS4-206ENST00000509093 SOS2Q07890 1332 aaPredicted RBP14.08□□□□□ -0.16
COPS4-206ENST00000509093 MCM4P33991 863 aa14.07□□□□□ -0.16
COPS4-206ENST00000509093 MRE11P49959 708 aa14.07□□□□□ -0.16
COPS4-206ENST00000509093 ANKRD24Q8TF21 1146 aa14.07□□□□□ -0.16
COPS4-206ENST00000509093 PHRF1Q9P1Y6 1649 aaKnown RBP14.07□□□□□ -0.16
COPS4-206ENST00000509093 IGHDP01880 384 aa14.07□□□□□ -0.16
COPS4-206ENST00000509093 ZNF853P0CG23 659 aa14.07□□□□□ -0.16
COPS4-206ENST00000509093 UPF2Q9HAU5 1272 aaKnown RBP14.07□□□□□ -0.16
COPS4-206ENST00000509093 RGPD2P0DJD1 1756 aa14.06□□□□□ -0.16
COPS4-206ENST00000509093 LMOD3Q0VAK6 560 aa14.06□□□□□ -0.16
COPS4-206ENST00000509093 CHRNA2Q15822 529 aa14.06□□□□□ -0.16
COPS4-206ENST00000509093 TBC1D32Q96NH3 1257 aa14.06□□□□□ -0.16
COPS4-206ENST00000509093 MBIPQ9NS73 344 aa14.06□□□□□ -0.16
COPS4-206ENST00000509093 ARXQ96QS3 562 aa14.06□□□□□ -0.16
COPS4-206ENST00000509093 TBC1D2Q9BYX2 928 aa14.06□□□□□ -0.16
COPS4-206ENST00000509093 IFT57Q9NWB7 429 aa14.05□□□□□ -0.16
COPS4-206ENST00000509093 ISY1Q9ULR0 285 aaKnown RBP14.05□□□□□ -0.16
COPS4-206ENST00000509093 TNNQ9UQP3 1299 aa14.05□□□□□ -0.16
COPS4-206ENST00000509093 LTBP4Q8N2S1 1624 aa14.05□□□□□ -0.16
COPS4-206ENST00000509093 TSPYL6Q8N831 410 aa14.04□□□□□ -0.16
COPS4-206ENST00000509093 RGPD5Q99666 1765 aa14.04□□□□□ -0.16
COPS4-206ENST00000509093 CRYBG1Q9Y4K1 1723 aa14.03□□□□□ -0.16
COPS4-206ENST00000509093 ESPNB1AK53 854 aa14.03□□□□□ -0.16
COPS4-206ENST00000509093 GNAI1P63096 354 aa14.03□□□□□ -0.16
COPS4-206ENST00000509093 CALD1Q05682 793 aaKnown RBP14.03□□□□□ -0.16
COPS4-206ENST00000509093 CFAP44Q96MT7 982 aa14.03□□□□□ -0.16
COPS4-206ENST00000509093 KIAA0232Q92628 1395 aa14.03□□□□□ -0.16
COPS4-206ENST00000509093 TPM2P07951 284 aa14.03□□□□□ -0.16
COPS4-206ENST00000509093 PDE3AQ14432 1141 aa14.03□□□□□ -0.16
COPS4-206ENST00000509093 GAS2L2Q8NHY3 880 aa14.03□□□□□ -0.16
COPS4-206ENST00000509093 CLUAP1Q96AJ1 413 aa14.03□□□□□ -0.16
COPS4-206ENST00000509093 ELL2O00472 640 aaPredicted RBP14.02□□□□□ -0.16
COPS4-206ENST00000509093 SSH1Q8WYL5 1049 aa14.02□□□□□ -0.16
COPS4-206ENST00000509093 MIS18AQ9NYP9 233 aa14.02□□□□□ -0.16
COPS4-206ENST00000509093 CRB1P82279 1406 aa14.02□□□□□ -0.17
COPS4-206ENST00000509093 ERBB3P21860 1342 aa14.02□□□□□ -0.17
COPS4-206ENST00000509093 TRAK2O60296 914 aa14.01□□□□□ -0.17
COPS4-206ENST00000509093 C8orf58Q8NAV2 365 aa14.01□□□□□ -0.17
COPS4-206ENST00000509093 PANK1Q8TE04 598 aa14.01□□□□□ -0.17
COPS4-206ENST00000509093 GZF1Q9H116 711 aaPredicted RBP14.01□□□□□ -0.17
COPS4-206ENST00000509093 COL18A1P39060 1754 aa14.01□□□□□ -0.17
COPS4-206ENST00000509093 KRT24Q2M2I5 525 aa14.01□□□□□ -0.17
COPS4-206ENST00000509093 RTF1Q92541 710 aaKnown RBP14.01□□□□□ -0.17
COPS4-206ENST00000509093 GRPEL1Q9HAV7 217 aa14.01□□□□□ -0.17
COPS4-206ENST00000509093 CHMP5Q9NZZ3 219 aa14.01□□□□□ -0.17
COPS4-206ENST00000509093 CHL1O00533 1208 aa14□□□□□ -0.17
COPS4-206ENST00000509093 VAMP4O75379 141 aa14□□□□□ -0.17
COPS4-206ENST00000509093 CT47B1P0C2W7 299 aaPredicted RBP14□□□□□ -0.17
COPS4-206ENST00000509093 CANXP27824 592 aaKnown RBP14□□□□□ -0.17
COPS4-206ENST00000509093 IL17REQ8NFR9 667 aa14□□□□□ -0.17
COPS4-206ENST00000509093 NHSL1Q5SYE7 1610 aa14□□□□□ -0.17
COPS4-206ENST00000509093 NCAPD2Q15021 1401 aa14□□□□□ -0.17
COPS4-206ENST00000509093 GNAT3A8MTJ3 354 aa13.99□□□□□ -0.17
COPS4-206ENST00000509093 RLBP1P12271 317 aa13.99□□□□□ -0.17
COPS4-206ENST00000509093 SMC4Q9NTJ3 1288 aa13.99□□□□□ -0.17
COPS4-206ENST00000509093 ERBB4Q15303 1308 aa13.99□□□□□ -0.17
COPS4-206ENST00000509093 NLRP2Q9NX02 1062 aa13.99□□□□□ -0.17
COPS4-206ENST00000509093 CPDO75976 1380 aa13.98□□□□□ -0.17
COPS4-206ENST00000509093 MAP3K5Q99683 1374 aa13.98□□□□□ -0.17
COPS4-206ENST00000509093 DDX11L8A8MPP1 907 aa13.98□□□□□ -0.17
COPS4-206ENST00000509093 AAMPQ13685 434 aa13.98□□□□□ -0.17
COPS4-206ENST00000509093 COG6Q9Y2V7 657 aa13.98□□□□□ -0.17
COPS4-206ENST00000509093 CSB-PGBD3P0DP91 1061 aa13.97□□□□□ -0.17
COPS4-206ENST00000509093 PDCL3Q9H2J4 239 aa13.97□□□□□ -0.17
COPS4-206ENST00000509093 PRDM11Q9NQV5 511 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms