RNA–Protein interactions for RNA: ENST00000508624.5

APC-208, Transcript of APC, WNT signaling pathway regulator, humanhuman

TSL 1 (best)

Gene APC, Length 7,406 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APC-208ENST00000508624 LRSAM1Q6UWE0 723 aa6.21□□□□□ -1.41
APC-208ENST00000508624 DISP3Q9P2K9 1392 aa6.21□□□□□ -1.41
APC-208ENST00000508624 A0A0G2JS52 829 aa6.21□□□□□ -1.41
APC-208ENST00000508624 TUBB4BP68371 445 aa6.21□□□□□ -1.41
APC-208ENST00000508624 KIF18AQ8NI77 898 aa6.21□□□□□ -1.41
APC-208ENST00000508624 ZFYVE9O95405 1425 aa6.21□□□□□ -1.42
APC-208ENST00000508624 SOS1Q07889 1333 aaPredicted RBP6.21□□□□□ -1.42
APC-208ENST00000508624 POTEB2H3BUK9 544 aa6.21□□□□□ -1.42
APC-208ENST00000508624 HMGB1P09429 215 aaKnown RBP6.21□□□□□ -1.42
APC-208ENST00000508624 UBE2HP62256 183 aa6.21□□□□□ -1.42
APC-208ENST00000508624 ANO10Q9NW15 660 aa6.21□□□□□ -1.42
APC-208ENST00000508624 CTNNA3Q9UI47 895 aa6.21□□□□□ -1.42
APC-208ENST00000508624 STK38Q15208 465 aa6.21□□□□□ -1.42
APC-208ENST00000508624 PLEKHO1Q53GL0 409 aaPredicted RBP6.21□□□□□ -1.42
APC-208ENST00000508624 FILIP1Q7Z7B0 1213 aa6.21□□□□□ -1.42
APC-208ENST00000508624 SPATA32Q96LK8 384 aa6.21□□□□□ -1.42
APC-208ENST00000508624 KDM5AP29375 1690 aaKnown RBP6.21□□□□□ -1.42
APC-208ENST00000508624 PZPP20742 1482 aa6.21□□□□□ -1.42
APC-208ENST00000508624 PLB1Q6P1J6 1458 aa6.21□□□□□ -1.42
APC-208ENST00000508624 ZSCAN12O43309 604 aa6.21□□□□□ -1.42
APC-208ENST00000508624 AMER1Q5JTC6 1135 aaPredicted RBP6.21□□□□□ -1.42
APC-208ENST00000508624 RAB3GAP1Q15042 981 aa6.2□□□□□ -1.42
APC-208ENST00000508624 DDX11Q96FC9 970 aa6.2□□□□□ -1.42
APC-208ENST00000508624 PDRG1Q9NUG6 133 aa6.2□□□□□ -1.42
APC-208ENST00000508624 KDM5DQ9BY66 1539 aa6.2□□□□□ -1.42
APC-208ENST00000508624 PBRM1Q86U86 1689 aa6.2□□□□□ -1.42
APC-208ENST00000508624 NUP153P49790 1475 aaKnown RBP6.2□□□□□ -1.42
APC-208ENST00000508624 SYCE3A1L190 88 aa6.2□□□□□ -1.42
APC-208ENST00000508624 TRIM27P14373 513 aa6.2□□□□□ -1.42
APC-208ENST00000508624 CCDC171Q6TFL3 1326 aa6.2□□□□□ -1.42
APC-208ENST00000508624 SMC2O95347 1197 aa6.2□□□□□ -1.42
APC-208ENST00000508624 SLC4A2P04920 1241 aa6.2□□□□□ -1.42
APC-208ENST00000508624 TAOK2Q9UL54 1235 aa6.2□□□□□ -1.42
APC-208ENST00000508624 KDM2BQ8NHM5 1336 aa6.2□□□□□ -1.42
APC-208ENST00000508624 ZSCAN25Q6NSZ9 544 aa6.2□□□□□ -1.42
APC-208ENST00000508624 CDK19Q9BWU1 502 aa6.2□□□□□ -1.42
APC-208ENST00000508624 POLR1AO95602 1720 aaPredicted RBP6.2□□□□□ -1.42
APC-208ENST00000508624 EPB41L2O43491 1005 aaKnown RBP6.2□□□□□ -1.42
APC-208ENST00000508624 OFD1O75665 1012 aa6.2□□□□□ -1.42
APC-208ENST00000508624 TXLNAP40222 546 aa6.2□□□□□ -1.42
APC-208ENST00000508624 CREBRFQ8IUR6 639 aa6.2□□□□□ -1.42
APC-208ENST00000508624 NOL10Q9BSC4 688 aaKnown RBP6.2□□□□□ -1.42
APC-208ENST00000508624 GTPBP4Q9BZE4 634 aaKnown RBP6.2□□□□□ -1.42
APC-208ENST00000508624 LIMCH1Q9UPQ0 1083 aa6.2□□□□□ -1.42
APC-208ENST00000508624 ZKSCAN5Q9Y2L8 839 aa6.2□□□□□ -1.42
APC-208ENST00000508624 TTC21BQ7Z4L5 1316 aa6.2□□□□□ -1.42
APC-208ENST00000508624 XRCC6P12956 609 aaKnown RBP eCLIP6.2□□□□□ -1.42
APC-208ENST00000508624 EIF2S2P20042 333 aaKnown RBP6.2□□□□□ -1.42
APC-208ENST00000508624 MX1P20591 662 aa6.2□□□□□ -1.42
APC-208ENST00000508624 PTPN14Q15678 1187 aa6.2□□□□□ -1.42
APC-208ENST00000508624 INTS4Q96HW7 963 aaKnown RBP6.2□□□□□ -1.42
APC-208ENST00000508624 PRAM1Q96QH2 718 aa6.2□□□□□ -1.42
APC-208ENST00000508624 ABCC2Q92887 1545 aa6.19□□□□□ -1.42
APC-208ENST00000508624 ARHGEF5Q12774 1597 aa6.19□□□□□ -1.42
APC-208ENST00000508624 RIC3Q7Z5B4 369 aa6.19□□□□□ -1.42
APC-208ENST00000508624 RBM10P98175 930 aaKnown RBP6.19□□□□□ -1.42
APC-208ENST00000508624 HDGFL1Q5TGJ6 251 aa6.19□□□□□ -1.42
APC-208ENST00000508624 NUTM2DQ5VT03 806 aaPredicted RBP6.19□□□□□ -1.42
APC-208ENST00000508624 TBC1D9Q6ZT07 1266 aa6.19□□□□□ -1.42
APC-208ENST00000508624 AFAP1Q8N556 730 aa6.19□□□□□ -1.42
APC-208ENST00000508624 WASF1Q92558 559 aa6.19□□□□□ -1.42
APC-208ENST00000508624 TOMM22Q9NS69 142 aa6.19□□□□□ -1.42
APC-208ENST00000508624 PES1O00541 588 aaKnown RBP6.19□□□□□ -1.42
APC-208ENST00000508624 NFXL1Q6ZNB6 911 aa6.19□□□□□ -1.42
APC-208ENST00000508624 SPATA31E1Q6ZUB1 1445 aa6.19□□□□□ -1.42
APC-208ENST00000508624 PLXNC1O60486 1568 aa6.19□□□□□ -1.42
APC-208ENST00000508624 TTC22Q5TAA0 569 aa6.19□□□□□ -1.42
APC-208ENST00000508624 TMEM132EQ6IEE7 984 aa6.19□□□□□ -1.42
APC-208ENST00000508624 UBXN4Q92575 508 aa6.19□□□□□ -1.42
APC-208ENST00000508624 MAST1Q9Y2H9 1570 aa6.19□□□□□ -1.42
APC-208ENST00000508624 RDXP35241 583 aaKnown RBP6.19□□□□□ -1.42
APC-208ENST00000508624 MAP9Q49MG5 647 aa6.19□□□□□ -1.42
APC-208ENST00000508624 TMCO3Q6UWJ1 677 aa6.19□□□□□ -1.42
APC-208ENST00000508624 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.19□□□□□ -1.42
APC-208ENST00000508624 PPFIBP1Q86W92 1011 aa6.19□□□□□ -1.42
APC-208ENST00000508624 ZNHIT6Q9NWK9 470 aaKnown RBP6.19□□□□□ -1.42
APC-208ENST00000508624 HMG20BQ9P0W2 317 aa6.19□□□□□ -1.42
APC-208ENST00000508624 TBC1D2BQ9UPU7 963 aa6.19□□□□□ -1.42
APC-208ENST00000508624 SSFA2P28290 1259 aa6.18□□□□□ -1.42
APC-208ENST00000508624 STIM1Q13586 685 aa6.18□□□□□ -1.42
APC-208ENST00000508624 LTV1Q96GA3 475 aaPredicted RBP6.18□□□□□ -1.42
APC-208ENST00000508624 UPF3BQ9BZI7 483 aaKnown RBP6.18□□□□□ -1.42
APC-208ENST00000508624 KDM5CP41229 1560 aa6.18□□□□□ -1.42
APC-208ENST00000508624 KDM5BQ9UGL1 1544 aa6.18□□□□□ -1.42
APC-208ENST00000508624 C1orf115Q9H7X2 142 aa6.18□□□□□ -1.42
APC-208ENST00000508624 KIF24Q5T7B8 1368 aa6.18□□□□□ -1.42
APC-208ENST00000508624 SFPQP23246 707 aaKnown RBP eCLIP6.18□□□□□ -1.42
APC-208ENST00000508624 ZSCAN23Q3MJ62 389 aa6.18□□□□□ -1.42
APC-208ENST00000508624 C14orf93Q9H972 538 aaKnown RBP6.18□□□□□ -1.42
APC-208ENST00000508624 CCDC61Q9Y6R9 512 aa6.18□□□□□ -1.42
APC-208ENST00000508624 IGHDP01880 384 aa6.18□□□□□ -1.42
APC-208ENST00000508624 CCDC83Q8IWF9 413 aa6.18□□□□□ -1.42
APC-208ENST00000508624 CCDC150Q8NCX0 1101 aa6.18□□□□□ -1.42
APC-208ENST00000508624 PCMTD1Q96MG8 357 aaPredicted RBP6.18□□□□□ -1.42
APC-208ENST00000508624 MARCH6O60337 910 aa6.17□□□□□ -1.42
APC-208ENST00000508624 SERPINC1P01008 464 aa6.17□□□□□ -1.42
APC-208ENST00000508624 TRIM22Q8IYM9 498 aa6.17□□□□□ -1.42
APC-208ENST00000508624 SPC24Q8NBT2 197 aa6.17□□□□□ -1.42
APC-208ENST00000508624 RAPGEF4Q8WZA2 1011 aa6.17□□□□□ -1.42
APC-208ENST00000508624 ZSCAN16Q9H4T2 348 aaPredicted RBP6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms