RNA–Protein interactions for RNA: ENST00000506622.5

SEC24D-208, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

TSL 2

Gene SEC24D, Length 1,319 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-208ENST00000506622 NBPF6Q5VWK0 638 aa20.29■□□□□ 0.84
SEC24D-208ENST00000506622 NBPF4Q96M43 638 aa20.29■□□□□ 0.84
SEC24D-208ENST00000506622 SGIP1Q9BQI5 828 aa20.29■□□□□ 0.84
SEC24D-208ENST00000506622 SMG6Q86US8 1419 aaKnown RBP20.29■□□□□ 0.84
SEC24D-208ENST00000506622 RAPGEF4Q8WZA2 1011 aa20.28■□□□□ 0.84
SEC24D-208ENST00000506622 ARXQ96QS3 562 aa20.28■□□□□ 0.84
SEC24D-208ENST00000506622 CGNL1Q0VF96 1302 aa20.28■□□□□ 0.84
SEC24D-208ENST00000506622 GOLGB1Q14789 3259 aaKnown RBP20.28■□□□□ 0.84
SEC24D-208ENST00000506622 AKT1S1Q96B36 256 aa20.27■□□□□ 0.84
SEC24D-208ENST00000506622 DOT1LQ8TEK3 1739 aa20.27■□□□□ 0.84
SEC24D-208ENST00000506622 KIF20BQ96Q89 1820 aa20.27■□□□□ 0.84
SEC24D-208ENST00000506622 MEGF6O75095 1541 aa20.27■□□□□ 0.83
SEC24D-208ENST00000506622 USHBP1Q8N6Y0 703 aa20.27■□□□□ 0.83
SEC24D-208ENST00000506622 SLC16A10Q8TF71 515 aa20.27■□□□□ 0.83
SEC24D-208ENST00000506622 SHANK3Q9BYB0 1731 aa20.26■□□□□ 0.83
SEC24D-208ENST00000506622 TATP17735 454 aaPredicted RBP20.26■□□□□ 0.83
SEC24D-208ENST00000506622 HSP90AB2PQ58FF8 381 aa20.26■□□□□ 0.83
SEC24D-208ENST00000506622 TFCP2L1Q9NZI6 479 aa20.26■□□□□ 0.83
SEC24D-208ENST00000506622 TIMELESSQ9UNS1 1208 aa20.25■□□□□ 0.83
SEC24D-208ENST00000506622 INSRP06213 1382 aa20.25■□□□□ 0.83
SEC24D-208ENST00000506622 FLT4P35916 1363 aa20.24■□□□□ 0.83
SEC24D-208ENST00000506622 KCNQ4P56696 695 aa20.24■□□□□ 0.83
SEC24D-208ENST00000506622 QSER1Q2KHR3 1735 aa20.23■□□□□ 0.83
SEC24D-208ENST00000506622 KIF24Q5T7B8 1368 aa20.23■□□□□ 0.83
SEC24D-208ENST00000506622 LY75O60449 1722 aa20.23■□□□□ 0.83
SEC24D-208ENST00000506622 POLD1P28340 1107 aa20.23■□□□□ 0.83
SEC24D-208ENST00000506622 CCNL1Q9UK58 526 aaPredicted RBP20.23■□□□□ 0.83
SEC24D-208ENST00000506622 NSD2O96028 1365 aa20.22■□□□□ 0.83
SEC24D-208ENST00000506622 CARD14Q9BXL6 1004 aa20.22■□□□□ 0.83
SEC24D-208ENST00000506622 PNPLA7Q6ZV29 1317 aa20.21■□□□□ 0.83
SEC24D-208ENST00000506622 MAP3K5Q99683 1374 aa20.2■□□□□ 0.82
SEC24D-208ENST00000506622 NSD3Q9BZ95 1437 aa20.2■□□□□ 0.82
SEC24D-208ENST00000506622 CHD4Q14839 1912 aa20.2■□□□□ 0.82
SEC24D-208ENST00000506622 PCDH11XQ9BZA7 1347 aa20.2■□□□□ 0.82
SEC24D-208ENST00000506622 PCDH11YQ9BZA8 1340 aa20.2■□□□□ 0.82
SEC24D-208ENST00000506622 TUBGCP6Q96RT7 1819 aa20.18■□□□□ 0.82
SEC24D-208ENST00000506622 PPM1GO15355 546 aaPredicted RBP20.18■□□□□ 0.82
SEC24D-208ENST00000506622 KLHL34Q8N239 644 aa20.18■□□□□ 0.82
SEC24D-208ENST00000506622 EMILIN1Q9Y6C2 1016 aa20.18■□□□□ 0.82
SEC24D-208ENST00000506622 MSH5O43196 834 aa20.17■□□□□ 0.82
SEC24D-208ENST00000506622 HMGB2P26583 209 aaKnown RBP20.17■□□□□ 0.82
SEC24D-208ENST00000506622 PCGF6Q9BYE7 350 aa20.17■□□□□ 0.82
SEC24D-208ENST00000506622 MPRIPQ6WCQ1 1025 aa20.16■□□□□ 0.82
SEC24D-208ENST00000506622 MAP2P11137 1827 aaKnown RBP20.15■□□□□ 0.82
SEC24D-208ENST00000506622 GPR162Q16538 588 aa20.15■□□□□ 0.82
SEC24D-208ENST00000506622 CLSPNQ9HAW4 1339 aa20.15■□□□□ 0.82
SEC24D-208ENST00000506622 COL24A1Q17RW2 1714 aa20.14■□□□□ 0.82
SEC24D-208ENST00000506622 CYP27B1O15528 508 aa20.14■□□□□ 0.81
SEC24D-208ENST00000506622 POLR3GLQ9BT43 218 aa20.14■□□□□ 0.81
SEC24D-208ENST00000506622 WASHC2AQ641Q2 1341 aa20.12■□□□□ 0.81
SEC24D-208ENST00000506622 COL23A1Q86Y22 540 aaPredicted RBP20.12■□□□□ 0.81
SEC24D-208ENST00000506622 ZNF784Q8NCA9 323 aaPredicted RBP20.12■□□□□ 0.81
SEC24D-208ENST00000506622 SPG7Q9UQ90 795 aa20.12■□□□□ 0.81
SEC24D-208ENST00000506622 PALLDQ8WX93 1383 aa20.11■□□□□ 0.81
SEC24D-208ENST00000506622 SMARCC1Q92922 1105 aaPredicted RBP20.11■□□□□ 0.81
SEC24D-208ENST00000506622 ITGB4P16144 1822 aa20.11■□□□□ 0.81
SEC24D-208ENST00000506622 PELP1Q8IZL8 1130 aaKnown RBP20.1■□□□□ 0.81
SEC24D-208ENST00000506622 FLAD1Q8NFF5 587 aa20.1■□□□□ 0.81
SEC24D-208ENST00000506622 C5P01031 1676 aa20.1■□□□□ 0.81
SEC24D-208ENST00000506622 PKD1L3Q7Z443 1732 aa20.09■□□□□ 0.81
SEC24D-208ENST00000506622 TAF1LQ8IZX4 1826 aa20.09■□□□□ 0.81
SEC24D-208ENST00000506622 ANKRD26Q9UPS8 1709 aa20.09■□□□□ 0.81
SEC24D-208ENST00000506622 EYA1Q99502 592 aa20.08■□□□□ 0.81
SEC24D-208ENST00000506622 POLKQ9UBT6 870 aa20.08■□□□□ 0.81
SEC24D-208ENST00000506622 NKX1-1Q15270 411 aaPredicted RBP20.07■□□□□ 0.8
SEC24D-208ENST00000506622 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.07■□□□□ 0.81e-7■□□□□ 11
SEC24D-208ENST00000506622 NCAPD2Q15021 1401 aa20.07■□□□□ 0.8
SEC24D-208ENST00000506622 TNNT2P45379 298 aaPredicted RBP20.06■□□□□ 0.8
SEC24D-208ENST00000506622 MSL1Q68DK7 614 aa20.06■□□□□ 0.8
SEC24D-208ENST00000506622 NLGN2Q8NFZ4 835 aa20.06■□□□□ 0.8
SEC24D-208ENST00000506622 PIGBQ92521 554 aa20.06■□□□□ 0.8
SEC24D-208ENST00000506622 TOGARAM1Q9Y4F4 1720 aa20.06■□□□□ 0.8
SEC24D-208ENST00000506622 EIF4G2P78344 907 aaKnown RBP eCLIP20.05■□□□□ 0.8
SEC24D-208ENST00000506622 AK7Q96M32 723 aa20.05■□□□□ 0.8
SEC24D-208ENST00000506622 IFNL2Q8IZJ0 200 aa20.03■□□□□ 0.8
SEC24D-208ENST00000506622 TMOD3Q9NYL9 352 aa20.03■□□□□ 0.8
SEC24D-208ENST00000506622 C4BP0C0L5 1744 aa20.02■□□□□ 0.8
SEC24D-208ENST00000506622 GRIN3BO60391 1043 aa20.02■□□□□ 0.79
SEC24D-208ENST00000506622 EIF4A2Q14240 407 aaKnown RBP20.02■□□□□ 0.79
SEC24D-208ENST00000506622 LOC102724428A0A0B4J2F2 783 aa20.01■□□□□ 0.79
SEC24D-208ENST00000506622 HSPA5P11021 654 aaKnown RBP20.01■□□□□ 0.79
SEC24D-208ENST00000506622 PHKG2P15735 406 aa20.01■□□□□ 0.79
SEC24D-208ENST00000506622 SIK1P57059 783 aa20.01■□□□□ 0.79
SEC24D-208ENST00000506622 PANK3Q9H999 370 aa20.01■□□□□ 0.79
SEC24D-208ENST00000506622 PHF14O94880 888 aa20■□□□□ 0.79
SEC24D-208ENST00000506622 CD2APQ9Y5K6 639 aa20■□□□□ 0.79
SEC24D-208ENST00000506622 UBR3Q6ZT12 1888 aa19.98■□□□□ 0.79
SEC24D-208ENST00000506622 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.98■□□□□ 0.79
SEC24D-208ENST00000506622 ASAP1Q9ULH1 1129 aa19.98■□□□□ 0.79
SEC24D-208ENST00000506622 YBX3P16989 372 aaKnown RBP eCLIP19.97■□□□□ 0.793e-6■□□□□ 8.2
SEC24D-208ENST00000506622 SSFA2P28290 1259 aa19.97■□□□□ 0.79
SEC24D-208ENST00000506622 ATP6V1AP38606 617 aa19.97■□□□□ 0.79
SEC24D-208ENST00000506622 CCER1Q8TC90 406 aaPredicted RBP19.97■□□□□ 0.79
SEC24D-208ENST00000506622 PLEKHG2Q9H7P9 1386 aa19.96■□□□□ 0.79
SEC24D-208ENST00000506622 AMIGO3Q86WK7 504 aa19.96■□□□□ 0.79
SEC24D-208ENST00000506622 LINC00116Q8NCU8 138 aa19.96■□□□□ 0.79
SEC24D-208ENST00000506622 HSP90AB1P08238 724 aaKnown RBP19.95■□□□□ 0.78
SEC24D-208ENST00000506622 ATG3Q9NT62 314 aa19.95■□□□□ 0.78
SEC24D-208ENST00000506622 IGSF1Q8N6C5 1336 aa19.95■□□□□ 0.78
SEC24D-208ENST00000506622 C1QTNF8P60827 252 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms