RNA–Protein interactions for RNA: ENST00000504327.1

PDLIM1P4-201, Transcript of PDZ and LIM domain 1 pseudogene 4, humanhuman

BASIC

Gene PDLIM1P4, Length 1,006 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P4-201ENST00000504327 VEGFBP49765 207 aa7.75□□□□□ -1.17
PDLIM1P4-201ENST00000504327 OSBPL3Q9H4L5 887 aa7.75□□□□□ -1.17
PDLIM1P4-201ENST00000504327 PIK3CDO00329 1044 aa7.74□□□□□ -1.17
PDLIM1P4-201ENST00000504327 NFX1Q12986 1120 aaKnown RBP7.74□□□□□ -1.17
PDLIM1P4-201ENST00000504327 OXLD1Q5BKU9 147 aa7.74□□□□□ -1.17
PDLIM1P4-201ENST00000504327 FOXD4L5Q5VV16 416 aaPredicted RBP7.74□□□□□ -1.17
PDLIM1P4-201ENST00000504327 CYP2U1Q7Z449 544 aa7.74□□□□□ -1.17
PDLIM1P4-201ENST00000504327 ADAMTS19Q8TE59 1207 aa7.74□□□□□ -1.17
PDLIM1P4-201ENST00000504327 TRIM52Q96A61 297 aa7.74□□□□□ -1.17
PDLIM1P4-201ENST00000504327 TERTO14746 1132 aaKnown RBP7.73□□□□□ -1.17
PDLIM1P4-201ENST00000504327 TRAK2O60296 914 aa7.73□□□□□ -1.17
PDLIM1P4-201ENST00000504327 PROSER2Q86WR7 435 aaPredicted RBP7.73□□□□□ -1.17
PDLIM1P4-201ENST00000504327 RNF217Q8TC41 542 aa7.73□□□□□ -1.17
PDLIM1P4-201ENST00000504327 ALG2Q9H553 416 aa7.73□□□□□ -1.17
PDLIM1P4-201ENST00000504327 NXF1Q9UBU9 619 aaKnown RBP7.73□□□□□ -1.17
PDLIM1P4-201ENST00000504327 MEN1O00255 615 aa7.72□□□□□ -1.17
PDLIM1P4-201ENST00000504327 MYCP01106 439 aaPredicted RBP7.72□□□□□ -1.17
PDLIM1P4-201ENST00000504327 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.72□□□□□ -1.17
PDLIM1P4-201ENST00000504327 LCE2CQ5TA81 110 aa7.72□□□□□ -1.17
PDLIM1P4-201ENST00000504327 TREML4Q6UXN2 200 aa7.72□□□□□ -1.17
PDLIM1P4-201ENST00000504327 HOMEZQ8IX15 550 aa7.72□□□□□ -1.17
PDLIM1P4-201ENST00000504327 PLPP7Q8NBV4 271 aa7.72□□□□□ -1.17
PDLIM1P4-201ENST00000504327 ESF1Q9H501 851 aaKnown RBP7.72□□□□□ -1.17
PDLIM1P4-201ENST00000504327 ARHGEF10LQ9HCE6 1279 aa7.72□□□□□ -1.17
PDLIM1P4-201ENST00000504327 RAB6BQ9NRW1 208 aa7.72□□□□□ -1.17
PDLIM1P4-201ENST00000504327 CHIC2Q9UKJ5 165 aa7.72□□□□□ -1.17
PDLIM1P4-201ENST00000504327 A0A1W2PRU2 124 aa7.71□□□□□ -1.18
PDLIM1P4-201ENST00000504327 WFS1O76024 890 aa7.71□□□□□ -1.18
PDLIM1P4-201ENST00000504327 LCE2AQ5TA79 106 aaPredicted RBP7.71□□□□□ -1.18
PDLIM1P4-201ENST00000504327 FNBP4Q8N3X1 1017 aaPredicted RBP7.71□□□□□ -1.18
PDLIM1P4-201ENST00000504327 GTF3C3Q9Y5Q9 886 aa7.7□□□□□ -1.18
PDLIM1P4-201ENST00000504327 H3BM21 787 aa7.69□□□□□ -1.18
PDLIM1P4-201ENST00000504327 STAU1O95793 577 aaKnown RBP7.69□□□□□ -1.18
PDLIM1P4-201ENST00000504327 SKIP12755 728 aa7.69□□□□□ -1.18
PDLIM1P4-201ENST00000504327 PTSQ03393 145 aa7.69□□□□□ -1.18
PDLIM1P4-201ENST00000504327 HDGFL1Q5TGJ6 251 aa7.68□□□□□ -1.18
PDLIM1P4-201ENST00000504327 UCN2Q96RP3 112 aa7.68□□□□□ -1.18
PDLIM1P4-201ENST00000504327 A6NJR5 290 aa7.67□□□□□ -1.18
PDLIM1P4-201ENST00000504327 GNRH1P01148 92 aa7.67□□□□□ -1.18
PDLIM1P4-201ENST00000504327 IL2RAP01589 272 aa7.67□□□□□ -1.18
PDLIM1P4-201ENST00000504327 RNF144AP50876 292 aaPredicted RBP7.67□□□□□ -1.18
PDLIM1P4-201ENST00000504327 USP4Q13107 963 aa7.67□□□□□ -1.18
PDLIM1P4-201ENST00000504327 CLN3Q13286 438 aa7.67□□□□□ -1.18
PDLIM1P4-201ENST00000504327 MAP7D1Q3KQU3 841 aa7.67□□□□□ -1.18
PDLIM1P4-201ENST00000504327 NPAS3Q8IXF0 933 aa7.67□□□□□ -1.18
PDLIM1P4-201ENST00000504327 GLMNQ92990 594 aa7.67□□□□□ -1.18
PDLIM1P4-201ENST00000504327 NLRP3Q96P20 1036 aa7.67□□□□□ -1.18
PDLIM1P4-201ENST00000504327 PPFIA3O75145 1194 aa7.66□□□□□ -1.18
PDLIM1P4-201ENST00000504327 RHOQP17081 205 aa7.66□□□□□ -1.18
PDLIM1P4-201ENST00000504327 LYSMD3Q7Z3D4 306 aa7.66□□□□□ -1.18
PDLIM1P4-201ENST00000504327 PRICKLE2Q7Z3G6 844 aa7.66□□□□□ -1.18
PDLIM1P4-201ENST00000504327 DEPDC4Q8N2C3 294 aa7.66□□□□□ -1.18
PDLIM1P4-201ENST00000504327 SLC16A10Q8TF71 515 aa7.66□□□□□ -1.18
PDLIM1P4-201ENST00000504327 ERBB4Q15303 1308 aa7.66□□□□□ -1.18
PDLIM1P4-201ENST00000504327 SENP3-EIF4A1A0A087X0R7 540 aa7.65□□□□□ -1.18
PDLIM1P4-201ENST00000504327 USP17L5A8MUK1 530 aa7.65□□□□□ -1.18
PDLIM1P4-201ENST00000504327 GPC1P35052 558 aa7.65□□□□□ -1.18
PDLIM1P4-201ENST00000504327 NCOA4Q13772 614 aa7.65□□□□□ -1.18
PDLIM1P4-201ENST00000504327 NFATC2IPQ8NCF5 419 aa7.65□□□□□ -1.18
PDLIM1P4-201ENST00000504327 CNKSR1Q969H4 720 aa7.65□□□□□ -1.18
PDLIM1P4-201ENST00000504327 SIRT1Q96EB6 747 aa7.65□□□□□ -1.18
PDLIM1P4-201ENST00000504327 ETNK1Q9HBU6 452 aa7.65□□□□□ -1.18
PDLIM1P4-201ENST00000504327 SLC35F4A4IF30 521 aa7.64□□□□□ -1.19
PDLIM1P4-201ENST00000504327 EML3Q32P44 896 aa7.64□□□□□ -1.19
PDLIM1P4-201ENST00000504327 SLC27A3Q5K4L6 730 aa7.64□□□□□ -1.19
PDLIM1P4-201ENST00000504327 TBC1D9Q6ZT07 1266 aa7.64□□□□□ -1.19
PDLIM1P4-201ENST00000504327 CCDC155Q8N6L0 562 aa7.64□□□□□ -1.19
PDLIM1P4-201ENST00000504327 ESYT1Q9BSJ8 1104 aa7.64□□□□□ -1.19
PDLIM1P4-201ENST00000504327 SCNN1DP51172 638 aa7.63□□□□□ -1.19
PDLIM1P4-201ENST00000504327 IRF7Q92985 503 aa7.63□□□□□ -1.19
PDLIM1P4-201ENST00000504327 GRIP2Q9C0E4 1043 aa7.63□□□□□ -1.19
PDLIM1P4-201ENST00000504327 HRH3Q9Y5N1 445 aa7.63□□□□□ -1.19
PDLIM1P4-201ENST00000504327 GMPRP36959 345 aa7.62□□□□□ -1.19
PDLIM1P4-201ENST00000504327 GDF10P55107 478 aa7.62□□□□□ -1.19
PDLIM1P4-201ENST00000504327 POU4F2Q12837 409 aa7.62□□□□□ -1.19
PDLIM1P4-201ENST00000504327 ESCO1Q5FWF5 840 aa7.62□□□□□ -1.19
PDLIM1P4-201ENST00000504327 XAGE2Q96GT9 111 aa7.62□□□□□ -1.19
PDLIM1P4-201ENST00000504327 FHDC1Q9C0D6 1143 aaPredicted RBP7.62□□□□□ -1.19
PDLIM1P4-201ENST00000504327 USP17L3A6NCW0 530 aa7.61□□□□□ -1.19
PDLIM1P4-201ENST00000504327 USP17L4A6NCW7 530 aa7.61□□□□□ -1.19
PDLIM1P4-201ENST00000504327 ATP9BO43861 1147 aa7.61□□□□□ -1.19
PDLIM1P4-201ENST00000504327 GTF2IP78347 998 aa7.61□□□□□ -1.19
PDLIM1P4-201ENST00000504327 CENPCQ03188 943 aa7.61□□□□□ -1.19
PDLIM1P4-201ENST00000504327 USP17L2Q6R6M4 530 aa7.61□□□□□ -1.19
PDLIM1P4-201ENST00000504327 USP17L1Q7RTZ2 530 aa7.61□□□□□ -1.19
PDLIM1P4-201ENST00000504327 NOD1Q9Y239 953 aa7.61□□□□□ -1.19
PDLIM1P4-201ENST00000504327 VSIG8P0DPA2 414 aa7.6□□□□□ -1.19
PDLIM1P4-201ENST00000504327 ITGA6P23229 1130 aa7.6□□□□□ -1.19
PDLIM1P4-201ENST00000504327 TLR1Q15399 786 aa7.6□□□□□ -1.19
PDLIM1P4-201ENST00000504327 NBPF10Q6P3W6 841 aaKnown RBP7.6□□□□□ -1.19
PDLIM1P4-201ENST00000504327 NBPF15Q8N660 670 aa7.6□□□□□ -1.19
PDLIM1P4-201ENST00000504327 CALR3Q96L12 384 aaKnown RBP7.6□□□□□ -1.19
PDLIM1P4-201ENST00000504327 ZSCAN10Q96SZ4 725 aaPredicted RBP7.6□□□□□ -1.19
PDLIM1P4-201ENST00000504327 PCDHGA11Q9Y5H2 935 aa7.6□□□□□ -1.19
PDLIM1P4-201ENST00000504327 TMEM229AB2RXF0 380 aa7.59□□□□□ -1.19
PDLIM1P4-201ENST00000504327 WASLO00401 505 aaPredicted RBP7.59□□□□□ -1.19
PDLIM1P4-201ENST00000504327 WIPF1O43516 503 aa7.59□□□□□ -1.19
PDLIM1P4-201ENST00000504327 INHAP05111 366 aa7.59□□□□□ -1.19
PDLIM1P4-201ENST00000504327 PSME1Q06323 249 aa7.59□□□□□ -1.19
PDLIM1P4-201ENST00000504327 PLEKHM2Q8IWE5 1019 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms