RNA–Protein interactions for RNA: ENST00000504325.5

RACK1-210, Transcript of receptor for activated C kinase 1, humanhuman

TSL 1 (best)

Gene RACK1, Length 1,098 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-210ENST00000504325 RGPD2P0DJD1 1756 aa12.51□□□□□ -0.41
RACK1-210ENST00000504325 FCHSD2O94868 740 aa12.51□□□□□ -0.41
RACK1-210ENST00000504325 AMOTQ4VCS5 1084 aa12.51□□□□□ -0.41
RACK1-210ENST00000504325 SPG7Q9UQ90 795 aa12.51□□□□□ -0.41
RACK1-210ENST00000504325 OVOS2A0A0G2JMS6 1433 aa12.51□□□□□ -0.41
RACK1-210ENST00000504325 PLEKHO1Q53GL0 409 aaPredicted RBP12.5□□□□□ -0.41
RACK1-210ENST00000504325 MARCH10Q8NA82 808 aaPredicted RBP12.5□□□□□ -0.41
RACK1-210ENST00000504325 DDX54Q8TDD1 881 aaKnown RBP12.5□□□□□ -0.41
RACK1-210ENST00000504325 TNS2Q63HR2 1409 aa12.5□□□□□ -0.41
RACK1-210ENST00000504325 RGPD1P0DJD0 1748 aa12.5□□□□□ -0.41
RACK1-210ENST00000504325 PARP4Q9UKK3 1724 aaKnown RBP12.49□□□□□ -0.41
RACK1-210ENST00000504325 WDR43Q15061 677 aaKnown RBP eCLIP12.49□□□□□ -0.41
RACK1-210ENST00000504325 CCDC184Q52MB2 194 aa12.49□□□□□ -0.41
RACK1-210ENST00000504325 FAM196AQ6ZSG2 479 aa12.49□□□□□ -0.41
RACK1-210ENST00000504325 RSPH6AQ9H0K4 717 aa12.49□□□□□ -0.41
RACK1-210ENST00000504325 PNNQ9H307 717 aaKnown RBP12.49□□□□□ -0.41
RACK1-210ENST00000504325 MRS2Q9HD23 443 aa12.49□□□□□ -0.41
RACK1-210ENST00000504325 PCDH11XQ9BZA7 1347 aa12.48□□□□□ -0.41
RACK1-210ENST00000504325 PCDH11YQ9BZA8 1340 aa12.48□□□□□ -0.41
RACK1-210ENST00000504325 PRKAR2BP31323 418 aa12.48□□□□□ -0.41
RACK1-210ENST00000504325 FAM182BQ5T319 152 aa12.48□□□□□ -0.41
RACK1-210ENST00000504325 NEFMP07197 916 aa12.47□□□□□ -0.41
RACK1-210ENST00000504325 IFNL2Q8IZJ0 200 aa12.47□□□□□ -0.41
RACK1-210ENST00000504325 LRRC37A3O60309 1634 aa12.47□□□□□ -0.41
RACK1-210ENST00000504325 WNK3Q9BYP7 1800 aa12.46□□□□□ -0.41
RACK1-210ENST00000504325 CCER2I3L3R5 266 aa12.46□□□□□ -0.41
RACK1-210ENST00000504325 CYP27B1O15528 508 aa12.46□□□□□ -0.41
RACK1-210ENST00000504325 PNISRQ8TF01 805 aaKnown RBP12.46□□□□□ -0.41
RACK1-210ENST00000504325 ADAMTS8Q9UP79 889 aa12.46□□□□□ -0.41
RACK1-210ENST00000504325 BCL9O00512 1426 aa12.45□□□□□ -0.42
RACK1-210ENST00000504325 PHKG2P15735 406 aa12.45□□□□□ -0.42
RACK1-210ENST00000504325 NKX1-1Q15270 411 aaPredicted RBP12.45□□□□□ -0.42
RACK1-210ENST00000504325 MTHFSDQ2M296 383 aaKnown RBP12.45□□□□□ -0.42
RACK1-210ENST00000504325 C1orf141Q5JVX7 400 aa12.45□□□□□ -0.42
RACK1-210ENST00000504325 ZNF530Q6P9A1 599 aaPredicted RBP12.45□□□□□ -0.42
RACK1-210ENST00000504325 PHACTR3Q96KR7 559 aa12.45□□□□□ -0.42
RACK1-210ENST00000504325 BRWD3Q6RI45 1802 aa12.44□□□□□ -0.42
RACK1-210ENST00000504325 HSP90AB1P08238 724 aaKnown RBP12.44□□□□□ -0.42
RACK1-210ENST00000504325 MIER1Q8N108 512 aa12.44□□□□□ -0.42
RACK1-210ENST00000504325 GAS2L2Q8NHY3 880 aa12.44□□□□□ -0.42
RACK1-210ENST00000504325 PLEKHF1Q96S99 279 aa12.44□□□□□ -0.42
RACK1-210ENST00000504325 AKAP4Q5JQC9 854 aa12.43□□□□□ -0.42
RACK1-210ENST00000504325 MAPK8IP3Q9UPT6 1336 aa12.42□□□□□ -0.42
RACK1-210ENST00000504325 CCDC125Q86Z20 511 aa12.42□□□□□ -0.42
RACK1-210ENST00000504325 RUNDC1Q96C34 613 aa12.42□□□□□ -0.42
RACK1-210ENST00000504325 DCAF5Q96JK2 942 aa12.42□□□□□ -0.42
RACK1-210ENST00000504325 PKD1L3Q7Z443 1732 aa12.42□□□□□ -0.42
RACK1-210ENST00000504325 TRIM37O94972 964 aa12.41□□□□□ -0.42
RACK1-210ENST00000504325 ACSBG1Q96GR2 724 aa12.41□□□□□ -0.42
RACK1-210ENST00000504325 BCL11BQ9C0K0 894 aaPredicted RBP12.41□□□□□ -0.42
RACK1-210ENST00000504325 GNAT3A8MTJ3 354 aa12.4□□□□□ -0.42
RACK1-210ENST00000504325 PRIM1P49642 420 aaKnown RBP12.4□□□□□ -0.42
RACK1-210ENST00000504325 SF3B2Q13435 895 aaKnown RBP12.4□□□□□ -0.42
RACK1-210ENST00000504325 MPRIPQ6WCQ1 1025 aa12.4□□□□□ -0.42
RACK1-210ENST00000504325 CCDC146Q8IYE0 955 aa12.4□□□□□ -0.42
RACK1-210ENST00000504325 UPF1Q92900 1129 aaKnown RBP eCLIP12.4□□□□□ -0.42
RACK1-210ENST00000504325 ERVV-2B6SEH9 535 aa12.39□□□□□ -0.43
RACK1-210ENST00000504325 KCNQ2O43526 872 aa12.39□□□□□ -0.43
RACK1-210ENST00000504325 HTATSF1O43719 755 aaKnown RBP12.39□□□□□ -0.43
RACK1-210ENST00000504325 NFE2L2Q16236 605 aa12.39□□□□□ -0.43
RACK1-210ENST00000504325 FAM9BQ8IZU0 186 aa12.39□□□□□ -0.43
RACK1-210ENST00000504325 SYTL4Q96C24 671 aaPredicted RBP12.39□□□□□ -0.43
RACK1-210ENST00000504325 SHANK3Q9BYB0 1731 aa12.38□□□□□ -0.43
RACK1-210ENST00000504325 RTF1Q92541 710 aaKnown RBP12.38□□□□□ -0.43
RACK1-210ENST00000504325 MAP3K5Q99683 1374 aa12.38□□□□□ -0.43
RACK1-210ENST00000504325 RNMTO43148 476 aaKnown RBP12.37□□□□□ -0.43
RACK1-210ENST00000504325 APBA3O96018 575 aa12.37□□□□□ -0.43
RACK1-210ENST00000504325 TMPOP42166 694 aaKnown RBP12.37□□□□□ -0.43
RACK1-210ENST00000504325 RIPK4P57078 832 aa12.37□□□□□ -0.43
RACK1-210ENST00000504325 CABP4P57796 275 aa12.37□□□□□ -0.43
RACK1-210ENST00000504325 PTF1AQ7RTS3 328 aa12.37□□□□□ -0.43
RACK1-210ENST00000504325 IL17REQ8NFR9 667 aa12.37□□□□□ -0.43
RACK1-210ENST00000504325 LGR6Q9HBX8 967 aa12.37□□□□□ -0.43
RACK1-210ENST00000504325 APAF1O14727 1248 aa12.36□□□□□ -0.43
RACK1-210ENST00000504325 TMOD3Q9NYL9 352 aa12.36□□□□□ -0.43
RACK1-210ENST00000504325 KDM6AO15550 1401 aaPredicted RBP12.36□□□□□ -0.43
RACK1-210ENST00000504325 BAG6P46379 1132 aa12.35□□□□□ -0.43
RACK1-210ENST00000504325 LMOD3Q0VAK6 560 aa12.35□□□□□ -0.43
RACK1-210ENST00000504325 NEUROD2Q15784 382 aa12.35□□□□□ -0.43
RACK1-210ENST00000504325 NFATC2IPQ8NCF5 419 aa12.35□□□□□ -0.43
RACK1-210ENST00000504325 PIGBQ92521 554 aa12.35□□□□□ -0.43
RACK1-210ENST00000504325 SLC52A2Q9HAB3 445 aa12.35□□□□□ -0.43
RACK1-210ENST00000504325 PLSCR1O15162 318 aa12.34□□□□□ -0.43
RACK1-210ENST00000504325 TEFQ10587 303 aa12.34□□□□□ -0.43
RACK1-210ENST00000504325 RRP7AQ9Y3A4 280 aaKnown RBP12.34□□□□□ -0.43
RACK1-210ENST00000504325 CEMIPQ8WUJ3 1361 aa12.33□□□□□ -0.44
RACK1-210ENST00000504325 MCM10Q7L590 875 aa12.33□□□□□ -0.44
RACK1-210ENST00000504325 SMARCC1Q92922 1105 aaPredicted RBP12.33□□□□□ -0.44
RACK1-210ENST00000504325 EN1Q05925 392 aaPredicted RBP12.32□□□□□ -0.44
RACK1-210ENST00000504325 DCTN1Q14203 1278 aa12.32□□□□□ -0.44
RACK1-210ENST00000504325 NCBP3Q53F19 620 aaKnown RBP12.32□□□□□ -0.44
RACK1-210ENST00000504325 DEFB132Q7Z7B7 95 aa12.32□□□□□ -0.44
RACK1-210ENST00000504325 TRIM35Q9UPQ4 493 aa12.32□□□□□ -0.44
RACK1-210ENST00000504325 SBF2Q86WG5 1849 aa12.32□□□□□ -0.44
RACK1-210ENST00000504325 EP400Q96L91 3159 aa12.32□□□□□ -0.44
RACK1-210ENST00000504325 NHSQ6T4R5 1651 aa12.32□□□□□ -0.44
RACK1-210ENST00000504325 KAT6BQ8WYB5 2073 aa12.31□□□□□ -0.44
RACK1-210ENST00000504325 NGEFQ8N5V2 710 aa12.31□□□□□ -0.44
RACK1-210ENST00000504325 CAMKK2Q96RR4 588 aa12.31□□□□□ -0.44
RACK1-210ENST00000504325 DOT1LQ8TEK3 1739 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms