RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 GNAT3A8MTJ3 354 aa19.58■□□□□ 0.73
PCDHA1-203ENST00000504120 MPHOSPH8Q99549 860 aa19.58■□□□□ 0.72
PCDHA1-203ENST00000504120 CDKL5O76039 1030 aa19.58■□□□□ 0.72
PCDHA1-203ENST00000504120 CEP126Q9P2H0 1117 aa19.58■□□□□ 0.72
PCDHA1-203ENST00000504120 ABCC11Q96J66 1382 aa19.57■□□□□ 0.72
PCDHA1-203ENST00000504120 MYO6Q9UM54 1294 aa19.56■□□□□ 0.72
PCDHA1-203ENST00000504120 PPP6R1Q9UPN7 881 aa19.56■□□□□ 0.72
PCDHA1-203ENST00000504120 GPATCH8Q9UKJ3 1502 aaKnown RBP19.56■□□□□ 0.72
PCDHA1-203ENST00000504120 SERPINC1P01008 464 aa19.56■□□□□ 0.72
PCDHA1-203ENST00000504120 TTLL5Q6EMB2 1281 aa19.56■□□□□ 0.72
PCDHA1-203ENST00000504120 ALDH1L2Q3SY69 923 aa19.56■□□□□ 0.72
PCDHA1-203ENST00000504120 JAKMIP1Q96N16 626 aaKnown RBP19.56■□□□□ 0.72
PCDHA1-203ENST00000504120 GRPEL1Q9HAV7 217 aa19.56■□□□□ 0.72
PCDHA1-203ENST00000504120 UGGT2Q9NYU1 1516 aa19.56■□□□□ 0.72
PCDHA1-203ENST00000504120 KCNH5Q8NCM2 988 aa19.55■□□□□ 0.72
PCDHA1-203ENST00000504120 CFAP45Q9UL16 551 aa19.55■□□□□ 0.72
PCDHA1-203ENST00000504120 CTTNBP2Q8WZ74 1663 aa19.55■□□□□ 0.72
PCDHA1-203ENST00000504120 CWC27Q6UX04 472 aaKnown RBP19.55■□□□□ 0.72
PCDHA1-203ENST00000504120 IL1RAPL2Q9NP60 686 aa19.55■□□□□ 0.72
PCDHA1-203ENST00000504120 RPRD2Q5VT52 1461 aaKnown RBP19.55■□□□□ 0.72
PCDHA1-203ENST00000504120 PATL2C9JE40 543 aaKnown RBP19.55■□□□□ 0.72
PCDHA1-203ENST00000504120 FKBP4Q02790 459 aaKnown RBP eCLIP19.55■□□□□ 0.72
PCDHA1-203ENST00000504120 ZNHIT6Q9NWK9 470 aaKnown RBP19.55■□□□□ 0.72
PCDHA1-203ENST00000504120 KRT18P05783 430 aaKnown RBP19.55■□□□□ 0.72
PCDHA1-203ENST00000504120 NOM1Q5C9Z4 860 aaKnown RBP19.55■□□□□ 0.72
PCDHA1-203ENST00000504120 MCM4P33991 863 aa19.54■□□□□ 0.72
PCDHA1-203ENST00000504120 BRPF1P55201 1214 aaPredicted RBP19.54■□□□□ 0.72
PCDHA1-203ENST00000504120 HSP90AB2PQ58FF8 381 aa19.54■□□□□ 0.72
PCDHA1-203ENST00000504120 BRPF3Q9ULD4 1205 aa19.54■□□□□ 0.72
PCDHA1-203ENST00000504120 PRDM11Q9NQV5 511 aa19.54■□□□□ 0.72
PCDHA1-203ENST00000504120 STIM1Q13586 685 aa19.54■□□□□ 0.72
PCDHA1-203ENST00000504120 SPC24Q8NBT2 197 aa19.54■□□□□ 0.72
PCDHA1-203ENST00000504120 RDXP35241 583 aaKnown RBP19.54■□□□□ 0.72
PCDHA1-203ENST00000504120 SPATA32Q96LK8 384 aa19.54■□□□□ 0.72
PCDHA1-203ENST00000504120 NOL7Q9UMY1 257 aaKnown RBP19.54■□□□□ 0.72
PCDHA1-203ENST00000504120 ZFYVE27Q5T4F4 411 aa19.53■□□□□ 0.72
PCDHA1-203ENST00000504120 KLHL34Q8N239 644 aa19.53■□□□□ 0.72
PCDHA1-203ENST00000504120 RAB11FIP3O75154 756 aa19.53■□□□□ 0.72
PCDHA1-203ENST00000504120 DUSP27Q5VZP5 1158 aa19.53■□□□□ 0.72
PCDHA1-203ENST00000504120 KIF1BPQ96EK5 621 aa19.52■□□□□ 0.72
PCDHA1-203ENST00000504120 PPFIBP1Q86W92 1011 aa19.52■□□□□ 0.72
PCDHA1-203ENST00000504120 RARSP54136 660 aaKnown RBP19.52■□□□□ 0.72
PCDHA1-203ENST00000504120 CBFA2T2O43439 604 aa19.51■□□□□ 0.71
PCDHA1-203ENST00000504120 BCL11BQ9C0K0 894 aaPredicted RBP19.51■□□□□ 0.71
PCDHA1-203ENST00000504120 FANCAO15360 1455 aa19.51■□□□□ 0.71
PCDHA1-203ENST00000504120 NUP133Q8WUM0 1156 aa19.51■□□□□ 0.71
PCDHA1-203ENST00000504120 SOGA3Q5TF21 947 aa19.51■□□□□ 0.71
PCDHA1-203ENST00000504120 ADAMTS12P58397 1594 aa19.5■□□□□ 0.71
PCDHA1-203ENST00000504120 NKTRP30414 1462 aaKnown RBP19.5■□□□□ 0.71
PCDHA1-203ENST00000504120 LUC7LQ9NQ29 371 aaKnown RBP19.5■□□□□ 0.71
PCDHA1-203ENST00000504120 GLRX3O76003 335 aaKnown RBP19.5■□□□□ 0.71
PCDHA1-203ENST00000504120 MX1P20591 662 aa19.49■□□□□ 0.71
PCDHA1-203ENST00000504120 UBAC1Q9BSL1 405 aa19.49■□□□□ 0.71
PCDHA1-203ENST00000504120 NUP62CLQ9H1M0 184 aa19.49■□□□□ 0.71
PCDHA1-203ENST00000504120 CEP57L1Q8IYX8 460 aa19.49■□□□□ 0.71
PCDHA1-203ENST00000504120 EXOC6BQ9Y2D4 811 aa19.49■□□□□ 0.71
PCDHA1-203ENST00000504120 SSH1Q8WYL5 1049 aa19.49■□□□□ 0.71
PCDHA1-203ENST00000504120 WASF1Q92558 559 aa19.49■□□□□ 0.71
PCDHA1-203ENST00000504120 ITSN2Q9NZM3 1697 aa19.49■□□□□ 0.71
PCDHA1-203ENST00000504120 ATP10BO94823 1461 aa19.49■□□□□ 0.71
PCDHA1-203ENST00000504120 TDO2P48775 406 aa19.49■□□□□ 0.71
PCDHA1-203ENST00000504120 SYCP1Q15431 976 aa19.49■□□□□ 0.71
PCDHA1-203ENST00000504120 CWC15Q9P013 229 aaKnown RBP19.49■□□□□ 0.71
PCDHA1-203ENST00000504120 NUP153P49790 1475 aaKnown RBP19.49■□□□□ 0.71
PCDHA1-203ENST00000504120 DCTN1Q14203 1278 aa19.48■□□□□ 0.71
PCDHA1-203ENST00000504120 TXLNBQ8N3L3 684 aa19.48■□□□□ 0.71
PCDHA1-203ENST00000504120 NUTM1Q86Y26 1132 aa19.48■□□□□ 0.71
PCDHA1-203ENST00000504120 CNKSR2Q8WXI2 1034 aa19.48■□□□□ 0.71
PCDHA1-203ENST00000504120 MCM10Q7L590 875 aa19.47■□□□□ 0.71
PCDHA1-203ENST00000504120 DENND4BO75064 1496 aaPredicted RBP19.47■□□□□ 0.71
PCDHA1-203ENST00000504120 ATP2B2Q01814 1243 aa19.47■□□□□ 0.71
PCDHA1-203ENST00000504120 IMMTQ16891 758 aaKnown RBP19.47■□□□□ 0.71
PCDHA1-203ENST00000504120 FAM135AQ9P2D6 1515 aa19.47■□□□□ 0.71
PCDHA1-203ENST00000504120 CASTP20810 708 aaKnown RBP19.47■□□□□ 0.71
PCDHA1-203ENST00000504120 THUMPD2Q9BTF0 503 aaKnown RBP19.47■□□□□ 0.71
PCDHA1-203ENST00000504120 DHX29Q7Z478 1369 aaKnown RBP19.47■□□□□ 0.71
PCDHA1-203ENST00000504120 STK11IPQ8N1F8 1099 aa19.46■□□□□ 0.71
PCDHA1-203ENST00000504120 LARP1Q6PKG0 1096 aaKnown RBP19.46■□□□□ 0.71
PCDHA1-203ENST00000504120 CCDC112Q8NEF3 446 aa19.46■□□□□ 0.71
PCDHA1-203ENST00000504120 TAF7Q15545 349 aaPredicted RBP19.46■□□□□ 0.71
PCDHA1-203ENST00000504120 STARD3NLO95772 234 aa19.45■□□□□ 0.7
PCDHA1-203ENST00000504120 IGHMBP2P38935 993 aaKnown RBP19.45■□□□□ 0.7
PCDHA1-203ENST00000504120 WAPLQ7Z5K2 1190 aa19.45■□□□□ 0.7
PCDHA1-203ENST00000504120 MIS18AQ9NYP9 233 aa19.45■□□□□ 0.7
PCDHA1-203ENST00000504120 AKAP2Q9Y2D5 859 aa19.45■□□□□ 0.7
PCDHA1-203ENST00000504120 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.45■□□□□ 0.7
PCDHA1-203ENST00000504120 RAI14Q9P0K7 980 aa19.45■□□□□ 0.7
PCDHA1-203ENST00000504120 PLCH2O75038 1416 aa19.45■□□□□ 0.7
PCDHA1-203ENST00000504120 AMOTQ4VCS5 1084 aa19.45■□□□□ 0.7
PCDHA1-203ENST00000504120 C11orf95C9JLR9 678 aaPredicted RBP19.44■□□□□ 0.7
PCDHA1-203ENST00000504120 LRP2BPQ9P2M1 347 aa19.44■□□□□ 0.7
PCDHA1-203ENST00000504120 TMEM132AQ24JP5 1023 aa19.44■□□□□ 0.7
PCDHA1-203ENST00000504120 KIAA0556O60303 1618 aa19.44■□□□□ 0.7
PCDHA1-203ENST00000504120 ZC3H6P61129 1189 aaKnown RBP19.44■□□□□ 0.7
PCDHA1-203ENST00000504120 UPF3BQ9BZI7 483 aaKnown RBP19.44■□□□□ 0.7
PCDHA1-203ENST00000504120 DEF6Q9H4E7 631 aa19.44■□□□□ 0.7
PCDHA1-203ENST00000504120 U3KPZ7 1027 aaPredicted RBP19.44■□□□□ 0.7
PCDHA1-203ENST00000504120 SMTNL1A8MU46 457 aa19.43■□□□□ 0.7
PCDHA1-203ENST00000504120 AEBP2Q6ZN18 517 aaPredicted RBP19.43■□□□□ 0.7
PCDHA1-203ENST00000504120 AIDAQ96BJ3 306 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms