RNA–Protein interactions for RNA: ENST00000503784.1

RFC1-206, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-206ENST00000503784 SOX12O15370 315 aa10.17□□□□□ -0.78
RFC1-206ENST00000503784 NLRP6P59044 892 aa10.17□□□□□ -0.78
RFC1-206ENST00000503784 TNS2Q63HR2 1409 aa10.16□□□□□ -0.78
RFC1-206ENST00000503784 AKAP12Q02952 1782 aa10.16□□□□□ -0.78
RFC1-206ENST00000503784 PNPLA7Q6ZV29 1317 aa10.16□□□□□ -0.78
RFC1-206ENST00000503784 KCNQ4P56696 695 aa10.16□□□□□ -0.78
RFC1-206ENST00000503784 COL13A1Q5TAT6 717 aaPredicted RBP10.16□□□□□ -0.78
RFC1-206ENST00000503784 TFCP2L1Q9NZI6 479 aa10.16□□□□□ -0.78
RFC1-206ENST00000503784 WWC3Q9ULE0 1092 aa10.16□□□□□ -0.78
RFC1-206ENST00000503784 USP6P35125 1406 aa10.16□□□□□ -0.78
RFC1-206ENST00000503784 ADCY9O60503 1353 aa10.15□□□□□ -0.78
RFC1-206ENST00000503784 PLEKHG3A1L390 1219 aa10.15□□□□□ -0.78
RFC1-206ENST00000503784 MSL1Q68DK7 614 aa10.15□□□□□ -0.78
RFC1-206ENST00000503784 SLC16A10Q8TF71 515 aa10.15□□□□□ -0.78
RFC1-206ENST00000503784 CARD10Q9BWT7 1032 aa10.15□□□□□ -0.78
RFC1-206ENST00000503784 CPSF1Q10570 1443 aaKnown RBP10.15□□□□□ -0.79
RFC1-206ENST00000503784 WNK3Q9BYP7 1800 aa10.14□□□□□ -0.79
RFC1-206ENST00000503784 APLP1P51693 650 aa10.14□□□□□ -0.79
RFC1-206ENST00000503784 PHF12Q96QT6 1004 aa10.14□□□□□ -0.79
RFC1-206ENST00000503784 NHSQ6T4R5 1651 aa10.14□□□□□ -0.79
RFC1-206ENST00000503784 PPIP5K1Q6PFW1 1433 aa10.14□□□□□ -0.79
RFC1-206ENST00000503784 SLIT3O75094 1523 aa10.13□□□□□ -0.79
RFC1-206ENST00000503784 SRPK2P78362 688 aaKnown RBP10.13□□□□□ -0.79
RFC1-206ENST00000503784 TNS4Q8IZW8 715 aa10.13□□□□□ -0.79
RFC1-206ENST00000503784 DCAF11Q8TEB1 546 aa10.13□□□□□ -0.79
RFC1-206ENST00000503784 PCDH10Q9P2E7 1040 aa10.13□□□□□ -0.79
RFC1-206ENST00000503784 ARHGEF28Q8N1W1 1705 aaKnown RBP10.13□□□□□ -0.79
RFC1-206ENST00000503784 KIF3CO14782 793 aa10.12□□□□□ -0.79
RFC1-206ENST00000503784 ABCC6O95255 1503 aa10.11□□□□□ -0.79
RFC1-206ENST00000503784 CCDC7Q96M83 1385 aa10.11□□□□□ -0.79
RFC1-206ENST00000503784 HTRA3P83110 453 aa10.1□□□□□ -0.79
RFC1-206ENST00000503784 SLC27A3Q5K4L6 730 aa10.1□□□□□ -0.79
RFC1-206ENST00000503784 ARHGEF25Q86VW2 580 aa10.1□□□□□ -0.79
RFC1-206ENST00000503784 DNAJC5GQ8N7S2 189 aa10.1□□□□□ -0.79
RFC1-206ENST00000503784 CABP2Q9NPB3 220 aa10.1□□□□□ -0.79
RFC1-206ENST00000503784 COL18A1P39060 1754 aa10.09□□□□□ -0.79
RFC1-206ENST00000503784 PRELPP51888 382 aa10.09□□□□□ -0.79
RFC1-206ENST00000503784 SYTL4Q96C24 671 aaPredicted RBP10.09□□□□□ -0.79
RFC1-206ENST00000503784 NLRP2Q9NX02 1062 aa10.09□□□□□ -0.79
RFC1-206ENST00000503784 BTAF1O14981 1849 aa10.09□□□□□ -0.79
RFC1-206ENST00000503784 TRPM1Q7Z4N2 1603 aa10.08□□□□□ -0.8
RFC1-206ENST00000503784 POTEJP0CG39 1038 aa10.08□□□□□ -0.8
RFC1-206ENST00000503784 PIK3C2AO00443 1686 aa10.07□□□□□ -0.8
RFC1-206ENST00000503784 IL2RBP14784 551 aa10.07□□□□□ -0.8
RFC1-206ENST00000503784 COL23A1Q86Y22 540 aaPredicted RBP10.07□□□□□ -0.8
RFC1-206ENST00000503784 CABP1Q9NZU7 370 aa10.07□□□□□ -0.8
RFC1-206ENST00000503784 KCNH5Q8NCM2 988 aa10.06□□□□□ -0.8
RFC1-206ENST00000503784 DDX54Q8TDD1 881 aaKnown RBP10.06□□□□□ -0.8
RFC1-206ENST00000503784 CD2APQ9Y5K6 639 aa10.06□□□□□ -0.8
RFC1-206ENST00000503784 IGSF1Q8N6C5 1336 aa10.06□□□□□ -0.8
RFC1-206ENST00000503784 TUBGCP6Q96RT7 1819 aa10.05□□□□□ -0.8
RFC1-206ENST00000503784 COL24A1Q17RW2 1714 aa10.05□□□□□ -0.8
RFC1-206ENST00000503784 TOMM70O94826 608 aa10.05□□□□□ -0.8
RFC1-206ENST00000503784 LCE2DQ5TA82 110 aaPredicted RBP10.05□□□□□ -0.8
RFC1-206ENST00000503784 KLRG1Q96E93 195 aa10.05□□□□□ -0.8
RFC1-206ENST00000503784 CCNL1Q9UK58 526 aaPredicted RBP10.05□□□□□ -0.8
RFC1-206ENST00000503784 QSER1Q2KHR3 1735 aa10.04□□□□□ -0.8
RFC1-206ENST00000503784 PRIM1P49642 420 aaKnown RBP10.04□□□□□ -0.8
RFC1-206ENST00000503784 ASTLQ6HA08 431 aaPredicted RBP10.04□□□□□ -0.8
RFC1-206ENST00000503784 NMRK2Q9NPI5 230 aa10.04□□□□□ -0.8
RFC1-206ENST00000503784 METRNQ9UJH8 293 aa10.04□□□□□ -0.8
RFC1-206ENST00000503784 ERBB3P21860 1342 aa10.04□□□□□ -0.8
RFC1-206ENST00000503784 NFAT5O94916 1531 aa10.03□□□□□ -0.8
RFC1-206ENST00000503784 RGPD5Q99666 1765 aa10.03□□□□□ -0.8
RFC1-206ENST00000503784 TTC21BQ7Z4L5 1316 aa10.03□□□□□ -0.8
RFC1-206ENST00000503784 JMYQ8N9B5 988 aa10.02□□□□□ -0.81
RFC1-206ENST00000503784 ANKRD24Q8TF21 1146 aa10.02□□□□□ -0.81
RFC1-206ENST00000503784 QRICH2Q9H0J4 1663 aa10.02□□□□□ -0.81
RFC1-206ENST00000503784 CENPJQ9HC77 1338 aaPredicted RBP10.02□□□□□ -0.81
RFC1-206ENST00000503784 NSD2O96028 1365 aa10.01□□□□□ -0.81
RFC1-206ENST00000503784 SLC34A2O95436 690 aa10.01□□□□□ -0.81
RFC1-206ENST00000503784 C7P10643 843 aa10.01□□□□□ -0.81
RFC1-206ENST00000503784 ANKRD36BQ8N2N9 1353 aa10.01□□□□□ -0.81
RFC1-206ENST00000503784 WDR90Q96KV7 1748 aa10□□□□□ -0.81
RFC1-206ENST00000503784 ATMINO43313 823 aaPredicted RBP10□□□□□ -0.81
RFC1-206ENST00000503784 MNX1P50219 401 aaPredicted RBP10□□□□□ -0.81
RFC1-206ENST00000503784 NBPF1Q3BBV0 1214 aa10□□□□□ -0.81
RFC1-206ENST00000503784 C16orf71Q8IYS4 520 aaPredicted RBP10□□□□□ -0.81
RFC1-206ENST00000503784 SLC39A7Q92504 469 aa10□□□□□ -0.81
RFC1-206ENST00000503784 PHF14O94880 888 aa9.99□□□□□ -0.81
RFC1-206ENST00000503784 SMIM5Q71RC9 77 aa9.99□□□□□ -0.81
RFC1-206ENST00000503784 MS4A3Q96HJ5 214 aa9.99□□□□□ -0.81
RFC1-206ENST00000503784 USP47Q96K76 1375 aa9.99□□□□□ -0.81
RFC1-206ENST00000503784 HSPA1AP0DMV8 641 aaKnown RBP9.98□□□□□ -0.81
RFC1-206ENST00000503784 HSPA1BP0DMV9 641 aaKnown RBP9.98□□□□□ -0.81
RFC1-206ENST00000503784 MAMSTRQ6ZN01 415 aa9.98□□□□□ -0.81
RFC1-206ENST00000503784 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.98□□□□□ -0.817e-6■■□□□ 11.5
RFC1-206ENST00000503784 RBM46Q8TBY0 533 aaKnown RBP9.98□□□□□ -0.81
RFC1-206ENST00000503784 LTV1Q96GA3 475 aaPredicted RBP9.98□□□□□ -0.81
RFC1-206ENST00000503784 STAC3Q96MF2 364 aa9.98□□□□□ -0.81
RFC1-206ENST00000503784 TTC21AQ8NDW8 1320 aa9.98□□□□□ -0.81
RFC1-206ENST00000503784 DOT1LQ8TEK3 1739 aa9.97□□□□□ -0.81
RFC1-206ENST00000503784 ARHGAP27Q6ZUM4 889 aa9.96□□□□□ -0.82
RFC1-206ENST00000503784 AMIGO3Q86WK7 504 aa9.96□□□□□ -0.82
RFC1-206ENST00000503784 NME9Q86XW9 330 aa9.96□□□□□ -0.82
RFC1-206ENST00000503784 AK7Q96M32 723 aa9.96□□□□□ -0.82
RFC1-206ENST00000503784 BCS1LQ9Y276 419 aa9.96□□□□□ -0.82
RFC1-206ENST00000503784 KTN1Q86UP2 1357 aaKnown RBP9.96□□□□□ -0.82
RFC1-206ENST00000503784 CICQ96RK0 1608 aaPredicted RBP9.96□□□□□ -0.82
RFC1-206ENST00000503784 KAT6BQ8WYB5 2073 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms