RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 RSF1Q96T23 1441 aaPredicted RBP6.26□□□□□ -1.41
HMGB1P21-201ENST00000502313 ZBTB24O43167 697 aaPredicted RBP6.26□□□□□ -1.41
HMGB1P21-201ENST00000502313 LINC01559Q495D7 138 aa6.26□□□□□ -1.41
HMGB1P21-201ENST00000502313 KANK4Q5T7N3 995 aaPredicted RBP6.26□□□□□ -1.41
HMGB1P21-201ENST00000502313 TMEM164Q5U3C3 297 aa6.26□□□□□ -1.41
HMGB1P21-201ENST00000502313 TRIM52Q96A61 297 aa6.26□□□□□ -1.41
HMGB1P21-201ENST00000502313 ZNF594Q96JF6 807 aaPredicted RBP6.26□□□□□ -1.41
HMGB1P21-201ENST00000502313 ARID4BQ4LE39 1312 aaPredicted RBP6.25□□□□□ -1.41
HMGB1P21-201ENST00000502313 CERS3Q8IU89 383 aa6.25□□□□□ -1.41
HMGB1P21-201ENST00000502313 GIPC2Q8TF65 315 aa6.25□□□□□ -1.41
HMGB1P21-201ENST00000502313 STK32AQ8WU08 396 aa6.25□□□□□ -1.41
HMGB1P21-201ENST00000502313 C8orf37Q96NL8 207 aa6.25□□□□□ -1.41
HMGB1P21-201ENST00000502313 CDV3Q9UKY7 258 aaKnown RBP6.25□□□□□ -1.41
HMGB1P21-201ENST00000502313 ERCC3P19447 782 aa6.24□□□□□ -1.41
HMGB1P21-201ENST00000502313 GGCXP38435 758 aa6.24□□□□□ -1.41
HMGB1P21-201ENST00000502313 SH3BP5LQ7L8J4 393 aa6.24□□□□□ -1.41
HMGB1P21-201ENST00000502313 ANKMY2Q8IV38 441 aa6.24□□□□□ -1.41
HMGB1P21-201ENST00000502313 ANKRD13AQ8IZ07 590 aa6.24□□□□□ -1.41
HMGB1P21-201ENST00000502313 OGFOD1Q8N543 542 aa6.24□□□□□ -1.41
HMGB1P21-201ENST00000502313 CDCA7Q9BWT1 371 aaPredicted RBP6.24□□□□□ -1.41
HMGB1P21-201ENST00000502313 DNAAF2Q9NVR5 837 aaKnown RBP6.24□□□□□ -1.41
HMGB1P21-201ENST00000502313 FCF1Q9Y324 198 aaKnown RBP6.24□□□□□ -1.41
HMGB1P21-201ENST00000502313 S1PR4O95977 384 aa6.23□□□□□ -1.41
HMGB1P21-201ENST00000502313 MYCP01106 439 aaPredicted RBP6.23□□□□□ -1.41
HMGB1P21-201ENST00000502313 CRTC2Q53ET0 693 aaPredicted RBP6.23□□□□□ -1.41
HMGB1P21-201ENST00000502313 PHLDB3Q6NSJ2 640 aa6.23□□□□□ -1.41
HMGB1P21-201ENST00000502313 ZNF511Q8NB15 262 aa6.23□□□□□ -1.41
HMGB1P21-201ENST00000502313 BAP1Q92560 729 aa6.23□□□□□ -1.41
HMGB1P21-201ENST00000502313 ZMIZ1Q9ULJ6 1067 aa6.23□□□□□ -1.41
HMGB1P21-201ENST00000502313 BAZ1BQ9UIG0 1483 aaKnown RBP6.22□□□□□ -1.41
HMGB1P21-201ENST00000502313 ANKRD62A6NC57 917 aa6.22□□□□□ -1.41
HMGB1P21-201ENST00000502313 ATP2B4P23634 1241 aa6.22□□□□□ -1.41
HMGB1P21-201ENST00000502313 ARID4AP29374 1257 aaPredicted RBP6.22□□□□□ -1.41
HMGB1P21-201ENST00000502313 GTF2IP78347 998 aa6.22□□□□□ -1.41
HMGB1P21-201ENST00000502313 PTK7Q13308 1070 aa6.22□□□□□ -1.41
HMGB1P21-201ENST00000502313 NCLP19338 710 aaKnown RBP6.21□□□□□ -1.42
HMGB1P21-201ENST00000502313 RAB15P59190 212 aa6.21□□□□□ -1.42
HMGB1P21-201ENST00000502313 ZC3H6P61129 1189 aaKnown RBP6.21□□□□□ -1.42
HMGB1P21-201ENST00000502313 DPYDQ12882 1025 aa6.21□□□□□ -1.42
HMGB1P21-201ENST00000502313 SWI5Q1ZZU3 235 aa6.21□□□□□ -1.42
HMGB1P21-201ENST00000502313 ERFEQ4G0M1 354 aa6.21□□□□□ -1.42
HMGB1P21-201ENST00000502313 NAALADL2Q58DX5 795 aa6.21□□□□□ -1.42
HMGB1P21-201ENST00000502313 LARGE2Q8N3Y3 721 aa6.21□□□□□ -1.42
HMGB1P21-201ENST00000502313 UBXN4Q92575 508 aa6.21□□□□□ -1.42
HMGB1P21-201ENST00000502313 PCDHB11Q9Y5F2 797 aa6.21□□□□□ -1.42
HMGB1P21-201ENST00000502313 WIZO95785 1651 aa6.2□□□□□ -1.42
HMGB1P21-201ENST00000502313 USP4Q13107 963 aa6.2□□□□□ -1.42
HMGB1P21-201ENST00000502313 TJAP1Q5JTD0 557 aa6.2□□□□□ -1.42
HMGB1P21-201ENST00000502313 PTCRAQ6ISU1 281 aaPredicted RBP6.2□□□□□ -1.42
HMGB1P21-201ENST00000502313 GIMAP6Q6P9H5 292 aa6.2□□□□□ -1.42
HMGB1P21-201ENST00000502313 SEPT12Q8IYM1 358 aa6.2□□□□□ -1.42
HMGB1P21-201ENST00000502313 ZNF516Q92618 1163 aa6.2□□□□□ -1.42
HMGB1P21-201ENST00000502313 FOXJ1Q92949 421 aa6.2□□□□□ -1.42
HMGB1P21-201ENST00000502313 OCSTAMPQ9BR26 566 aa6.2□□□□□ -1.42
HMGB1P21-201ENST00000502313 GIGYF1O75420 1035 aaPredicted RBP6.19□□□□□ -1.42
HMGB1P21-201ENST00000502313 SEC13P55735 322 aa6.19□□□□□ -1.42
HMGB1P21-201ENST00000502313 TAGLNQ01995 201 aaKnown RBP6.19□□□□□ -1.42
HMGB1P21-201ENST00000502313 ZNF662Q6ZS27 426 aa6.19□□□□□ -1.42
HMGB1P21-201ENST00000502313 PHTF2Q8N3S3 785 aa6.19□□□□□ -1.42
HMGB1P21-201ENST00000502313 TPCN2Q8NHX9 752 aa6.19□□□□□ -1.42
HMGB1P21-201ENST00000502313 CLP1Q92989 425 aaKnown RBP6.19□□□□□ -1.42
HMGB1P21-201ENST00000502313 BIN2Q9UBW5 565 aaPredicted RBP6.19□□□□□ -1.42
HMGB1P21-201ENST00000502313 NESP48681 1621 aa6.18□□□□□ -1.42
HMGB1P21-201ENST00000502313 ANKRD33BA6NCL7 494 aa6.18□□□□□ -1.42
HMGB1P21-201ENST00000502313 SOWAHDA6NJG2 315 aa6.18□□□□□ -1.42
HMGB1P21-201ENST00000502313 MARSP56192 900 aaKnown RBP6.18□□□□□ -1.42
HMGB1P21-201ENST00000502313 CCDC102BQ68D86 513 aa6.18□□□□□ -1.42
HMGB1P21-201ENST00000502313 TRAF7Q6Q0C0 670 aa6.18□□□□□ -1.42
HMGB1P21-201ENST00000502313 SH3RF1Q7Z6J0 888 aa6.18□□□□□ -1.42
HMGB1P21-201ENST00000502313 UBE2Q2Q8WVN8 375 aa6.18□□□□□ -1.42
HMGB1P21-201ENST00000502313 HINFPQ9BQA5 517 aa6.18□□□□□ -1.42
HMGB1P21-201ENST00000502313 HIRIP3Q9BW71 556 aaPredicted RBP6.18□□□□□ -1.42
HMGB1P21-201ENST00000502313 PRMT3O60678 531 aa6.17□□□□□ -1.42
HMGB1P21-201ENST00000502313 CLDN10P78369 228 aa6.17□□□□□ -1.42
HMGB1P21-201ENST00000502313 KCNC4Q03721 635 aa6.17□□□□□ -1.42
HMGB1P21-201ENST00000502313 ARID5BQ14865 1188 aa6.17□□□□□ -1.42
HMGB1P21-201ENST00000502313 VASH1Q7L8A9 365 aaPredicted RBP6.17□□□□□ -1.42
HMGB1P21-201ENST00000502313 NPAS4Q8IUM7 802 aa6.17□□□□□ -1.42
HMGB1P21-201ENST00000502313 SIX5Q8N196 739 aa6.17□□□□□ -1.42
HMGB1P21-201ENST00000502313 CCDC85AQ96PX6 553 aaPredicted RBP6.17□□□□□ -1.42
HMGB1P21-201ENST00000502313 TOP2AP11388 1531 aaKnown RBP6.16□□□□□ -1.42
HMGB1P21-201ENST00000502313 LAMC3Q9Y6N6 1575 aa6.16□□□□□ -1.42
HMGB1P21-201ENST00000502313 ABL1P00519 1130 aa6.16□□□□□ -1.42
HMGB1P21-201ENST00000502313 SSFA2P28290 1259 aa6.16□□□□□ -1.42
HMGB1P21-201ENST00000502313 DPH6Q7L8W6 267 aa6.16□□□□□ -1.42
HMGB1P21-201ENST00000502313 TRMT44Q8IYL2 757 aaKnown RBP6.16□□□□□ -1.42
HMGB1P21-201ENST00000502313 EHBP1Q8NDI1 1231 aa6.16□□□□□ -1.42
HMGB1P21-201ENST00000502313 NKX2-3Q8TAU0 364 aa6.16□□□□□ -1.42
HMGB1P21-201ENST00000502313 KCTD15Q96SI1 283 aaPredicted RBP6.16□□□□□ -1.42
HMGB1P21-201ENST00000502313 SLAIN2Q9P270 581 aa6.16□□□□□ -1.42
HMGB1P21-201ENST00000502313 CHIC2Q9UKJ5 165 aa6.16□□□□□ -1.42
HMGB1P21-201ENST00000502313 BRPF3Q9ULD4 1205 aa6.16□□□□□ -1.42
HMGB1P21-201ENST00000502313 CFTRP13569 1480 aa6.15□□□□□ -1.42
HMGB1P21-201ENST00000502313 VARSP26640 1264 aaKnown RBP6.15□□□□□ -1.42
HMGB1P21-201ENST00000502313 SERPINB4P48594 390 aa6.15□□□□□ -1.42
HMGB1P21-201ENST00000502313 TRIM32Q13049 653 aa6.15□□□□□ -1.42
HMGB1P21-201ENST00000502313 SF3A1Q15459 793 aaKnown RBP6.15□□□□□ -1.42
HMGB1P21-201ENST00000502313 ZNF326Q5BKZ1 582 aaKnown RBP6.15□□□□□ -1.42
HMGB1P21-201ENST00000502313 NOL8Q76FK4 1167 aaKnown RBP6.15□□□□□ -1.42
HMGB1P21-201ENST00000502313 VTI1AQ96AJ9 217 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms