RNA–Protein interactions for RNA: ENST00000500197.6

LINC00461-201, long intergenic non-protein coding RNA 461, humanhuman

TSL 1 (best) BASIC

Gene LINC00461, Length 3,381 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00461-201ENST00000500197 NPHP4O75161 1426 aaPredicted RBP12.49□□□□□ -0.41
LINC00461-201ENST00000500197 PARP4Q9UKK3 1724 aaKnown RBP12.49□□□□□ -0.41
LINC00461-201ENST00000500197 RRS1Q15050 365 aaKnown RBP12.49□□□□□ -0.41
LINC00461-201ENST00000500197 COL18A1P39060 1754 aa12.49□□□□□ -0.41
LINC00461-201ENST00000500197 TWISTNBQ3B726 338 aaPredicted RBP12.48□□□□□ -0.41
LINC00461-201ENST00000500197 CEMIPQ8WUJ3 1361 aa12.48□□□□□ -0.41
LINC00461-201ENST00000500197 MSH6P52701 1360 aa12.47□□□□□ -0.41
LINC00461-201ENST00000500197 CEBPAP49715 358 aaPredicted RBP12.47□□□□□ -0.41
LINC00461-201ENST00000500197 HMOX1P09601 288 aa12.47□□□□□ -0.41
LINC00461-201ENST00000500197 BCL2L13Q9BXK5 485 aa12.47□□□□□ -0.41
LINC00461-201ENST00000500197 EIF5BO60841 1220 aaKnown RBP12.47□□□□□ -0.41
LINC00461-201ENST00000500197 RGPD2P0DJD1 1756 aa12.46□□□□□ -0.41
LINC00461-201ENST00000500197 FBLN1P23142 703 aa12.46□□□□□ -0.41
LINC00461-201ENST00000500197 PKD1L3Q7Z443 1732 aa12.46□□□□□ -0.41
LINC00461-201ENST00000500197 TSPYL6Q8N831 410 aa12.46□□□□□ -0.41
LINC00461-201ENST00000500197 GAS2L2Q8NHY3 880 aa12.46□□□□□ -0.41
LINC00461-201ENST00000500197 BMP2KLQ5H9B9 411 aa12.46□□□□□ -0.42
LINC00461-201ENST00000500197 C8orf58Q8NAV2 365 aa12.46□□□□□ -0.42
LINC00461-201ENST00000500197 ITPRIPQ8IWB1 547 aa12.45□□□□□ -0.42
LINC00461-201ENST00000500197 SLC26A8Q96RN1 970 aa12.45□□□□□ -0.42
LINC00461-201ENST00000500197 KCNA6P17658 529 aa12.45□□□□□ -0.42
LINC00461-201ENST00000500197 STRCP1A6NGW2 1772 aa12.45□□□□□ -0.42
LINC00461-201ENST00000500197 RBM25P49756 843 aaKnown RBP12.44□□□□□ -0.42
LINC00461-201ENST00000500197 SULT6B1Q6IMI4 303 aa12.44□□□□□ -0.42
LINC00461-201ENST00000500197 HOXC9P31274 260 aa12.44□□□□□ -0.42
LINC00461-201ENST00000500197 HSP90AB2PQ58FF8 381 aa12.44□□□□□ -0.42
LINC00461-201ENST00000500197 RGS3P49796 1198 aa12.44□□□□□ -0.42
LINC00461-201ENST00000500197 ANKLE2Q86XL3 938 aa12.44□□□□□ -0.42
LINC00461-201ENST00000500197 AEBP1Q8IUX7 1158 aa12.43□□□□□ -0.42
LINC00461-201ENST00000500197 MAP3K5Q99683 1374 aa12.43□□□□□ -0.42
LINC00461-201ENST00000500197 SCN11AQ9UI33 1791 aa12.43□□□□□ -0.42
LINC00461-201ENST00000500197 CHD1LQ86WJ1 897 aa12.43□□□□□ -0.42
LINC00461-201ENST00000500197 MRC1P22897 1456 aa12.43□□□□□ -0.42
LINC00461-201ENST00000500197 SIRT2Q8IXJ6 389 aa12.43□□□□□ -0.42
LINC00461-201ENST00000500197 XIRP1Q702N8 1843 aaKnown RBP12.42□□□□□ -0.42
LINC00461-201ENST00000500197 EYA1Q99502 592 aa12.42□□□□□ -0.42
LINC00461-201ENST00000500197 ANTXR1Q9H6X2 564 aa12.42□□□□□ -0.42
LINC00461-201ENST00000500197 DCTPP1Q9H773 170 aa12.42□□□□□ -0.42
LINC00461-201ENST00000500197 SEC24BO95487 1268 aa12.41□□□□□ -0.42
LINC00461-201ENST00000500197 HOXB7P09629 217 aa12.41□□□□□ -0.42
LINC00461-201ENST00000500197 RPAP2Q8IXW5 612 aaPredicted RBP12.41□□□□□ -0.42
LINC00461-201ENST00000500197 MTHFSDQ2M296 383 aaKnown RBP12.41□□□□□ -0.42
LINC00461-201ENST00000500197 ANKRD44Q8N8A2 993 aa12.41□□□□□ -0.42
LINC00461-201ENST00000500197 SNX21Q969T3 373 aa12.41□□□□□ -0.42
LINC00461-201ENST00000500197 IP6K1Q92551 441 aa12.4□□□□□ -0.42
LINC00461-201ENST00000500197 THUMPD2Q9BTF0 503 aaKnown RBP12.4□□□□□ -0.42
LINC00461-201ENST00000500197 HEG1Q9ULI3 1381 aa12.4□□□□□ -0.42
LINC00461-201ENST00000500197 BECN1Q14457 450 aa12.39□□□□□ -0.43
LINC00461-201ENST00000500197 KCNH5Q8NCM2 988 aa12.39□□□□□ -0.43
LINC00461-201ENST00000500197 FAM83GA6ND36 823 aa12.39□□□□□ -0.43
LINC00461-201ENST00000500197 PHF8Q9UPP1 1060 aa12.39□□□□□ -0.43
LINC00461-201ENST00000500197 DDIT3P35638 169 aa12.38□□□□□ -0.43
LINC00461-201ENST00000500197 UPF2Q9HAU5 1272 aaKnown RBP12.38□□□□□ -0.43
LINC00461-201ENST00000500197 LAMB4A4D0S4 1761 aa12.38□□□□□ -0.43
LINC00461-201ENST00000500197 NGDNQ8NEJ9 315 aaKnown RBP12.38□□□□□ -0.43
LINC00461-201ENST00000500197 IL27Q8NEV9 243 aa12.38□□□□□ -0.43
LINC00461-201ENST00000500197 IL17RAQ96F46 866 aa12.38□□□□□ -0.43
LINC00461-201ENST00000500197 PAPPAQ13219 1627 aa12.38□□□□□ -0.43
LINC00461-201ENST00000500197 C1orf167Q5SNV9 1468 aa12.38□□□□□ -0.43
LINC00461-201ENST00000500197 OSBPL3Q9H4L5 887 aa12.38□□□□□ -0.43
LINC00461-201ENST00000500197 NPM2Q86SE8 214 aaKnown RBP12.37□□□□□ -0.43
LINC00461-201ENST00000500197 GLI3P10071 1580 aa12.37□□□□□ -0.43
LINC00461-201ENST00000500197 RGPD5Q99666 1765 aa12.37□□□□□ -0.43
LINC00461-201ENST00000500197 CCT4P50991 539 aaKnown RBP12.37□□□□□ -0.43
LINC00461-201ENST00000500197 CHMP4AQ9BY43 222 aa12.36□□□□□ -0.43
LINC00461-201ENST00000500197 ABCA3Q99758 1704 aa12.36□□□□□ -0.43
LINC00461-201ENST00000500197 GNAT3A8MTJ3 354 aa12.36□□□□□ -0.43
LINC00461-201ENST00000500197 CEP85Q6P2H3 762 aa12.35□□□□□ -0.43
LINC00461-201ENST00000500197 SENP3Q9H4L4 574 aaPredicted RBP12.35□□□□□ -0.43
LINC00461-201ENST00000500197 SALL3Q9BXA9 1300 aa12.35□□□□□ -0.43
LINC00461-201ENST00000500197 UBR2Q8IWV8 1755 aa12.34□□□□□ -0.43
LINC00461-201ENST00000500197 PXDNQ92626 1479 aa12.34□□□□□ -0.43
LINC00461-201ENST00000500197 MCM10Q7L590 875 aa12.33□□□□□ -0.43
LINC00461-201ENST00000500197 EPB41L2O43491 1005 aaKnown RBP12.33□□□□□ -0.44
LINC00461-201ENST00000500197 AMPHP49418 695 aa12.33□□□□□ -0.44
LINC00461-201ENST00000500197 NLRP6P59044 892 aa12.33□□□□□ -0.44
LINC00461-201ENST00000500197 AOX1Q06278 1338 aa12.33□□□□□ -0.44
LINC00461-201ENST00000500197 DCTN1Q14203 1278 aa12.33□□□□□ -0.44
LINC00461-201ENST00000500197 C22orf23Q9BZE7 217 aa12.33□□□□□ -0.44
LINC00461-201ENST00000500197 C5P01031 1676 aa12.33□□□□□ -0.44
LINC00461-201ENST00000500197 NFKBIBQ15653 356 aa12.33□□□□□ -0.44
LINC00461-201ENST00000500197 TBC1D2Q9BYX2 928 aa12.32□□□□□ -0.44
LINC00461-201ENST00000500197 RTL5Q5HYW3 569 aaPredicted RBP12.32□□□□□ -0.44
LINC00461-201ENST00000500197 ARHGEF25Q86VW2 580 aa12.32□□□□□ -0.44
LINC00461-201ENST00000500197 RTF1Q92541 710 aaKnown RBP12.32□□□□□ -0.44
LINC00461-201ENST00000500197 LAS1LQ9Y4W2 734 aaKnown RBP12.32□□□□□ -0.44
LINC00461-201ENST00000500197 TAF7Q15545 349 aaPredicted RBP12.32□□□□□ -0.44
LINC00461-201ENST00000500197 PLEKHM2Q8IWE5 1019 aa12.32□□□□□ -0.44
LINC00461-201ENST00000500197 DEKP35659 375 aaKnown RBP12.31□□□□□ -0.44
LINC00461-201ENST00000500197 CCDC30Q5VVM6 783 aa12.31□□□□□ -0.44
LINC00461-201ENST00000500197 IL17REQ8NFR9 667 aa12.31□□□□□ -0.44
LINC00461-201ENST00000500197 KIF2CQ99661 725 aa12.31□□□□□ -0.44
LINC00461-201ENST00000500197 AMOTQ4VCS5 1084 aa12.3□□□□□ -0.44
LINC00461-201ENST00000500197 TTC22Q5TAA0 569 aa12.3□□□□□ -0.44
LINC00461-201ENST00000500197 ABTB2Q8N961 1025 aa12.3□□□□□ -0.44
LINC00461-201ENST00000500197 TSPYL4Q9UJ04 414 aa12.3□□□□□ -0.44
LINC00461-201ENST00000500197 SHANK3Q9BYB0 1731 aa12.3□□□□□ -0.44
LINC00461-201ENST00000500197 CPDO75976 1380 aa12.3□□□□□ -0.44
LINC00461-201ENST00000500197 CIZ1Q9ULV3 898 aaPredicted RBP12.3□□□□□ -0.44
LINC00461-201ENST00000500197 AKAP4Q5JQC9 854 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms