RNA–Protein interactions for RNA: ENST00000498535.1

MKRN1-216, Transcript of makorin ring finger protein 1, humanhuman

TSL 2

Gene MKRN1, Length 607 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKRN1-216ENST00000498535 NBPF4Q96M43 638 aa35.34■■■■□ 3.25
MKRN1-216ENST00000498535 SYT17Q9BSW7 474 aa35.33■■■■□ 3.25
MKRN1-216ENST00000498535 RAPGEF4Q8WZA2 1011 aa35.32■■■■□ 3.24
MKRN1-216ENST00000498535 SGIP1Q9BQI5 828 aa35.32■■■■□ 3.24
MKRN1-216ENST00000498535 MEGF6O75095 1541 aa35.32■■■■□ 3.24
MKRN1-216ENST00000498535 CGNL1Q0VF96 1302 aa35.31■■■■□ 3.24
MKRN1-216ENST00000498535 ARXQ96QS3 562 aa35.3■■■■□ 3.24
MKRN1-216ENST00000498535 USHBP1Q8N6Y0 703 aa35.29■■■■□ 3.24
MKRN1-216ENST00000498535 AKT1S1Q96B36 256 aa35.29■■■■□ 3.24
MKRN1-216ENST00000498535 DOT1LQ8TEK3 1739 aa35.28■■■■□ 3.24
MKRN1-216ENST00000498535 TATP17735 454 aaPredicted RBP35.26■■■■□ 3.24
MKRN1-216ENST00000498535 HSP90AB2PQ58FF8 381 aa35.26■■■■□ 3.24
MKRN1-216ENST00000498535 SLC16A10Q8TF71 515 aa35.26■■■■□ 3.24
MKRN1-216ENST00000498535 TIMELESSQ9UNS1 1208 aa35.26■■■■□ 3.24
MKRN1-216ENST00000498535 INSRP06213 1382 aa35.25■■■■□ 3.23
MKRN1-216ENST00000498535 KIF20BQ96Q89 1820 aa35.25■■■■□ 3.23
MKRN1-216ENST00000498535 TFCP2L1Q9NZI6 479 aa35.25■■■■□ 3.23
MKRN1-216ENST00000498535 FLT4P35916 1363 aa35.25■■■■□ 3.23
MKRN1-216ENST00000498535 KCNQ4P56696 695 aa35.24■■■■□ 3.23
MKRN1-216ENST00000498535 KIF24Q5T7B8 1368 aa35.24■■■■□ 3.23
MKRN1-216ENST00000498535 SHANK3Q9BYB0 1731 aa35.23■■■■□ 3.23
MKRN1-216ENST00000498535 NSD2O96028 1365 aa35.22■■■■□ 3.23
MKRN1-216ENST00000498535 CARD14Q9BXL6 1004 aa35.21■■■■□ 3.23
MKRN1-216ENST00000498535 CCNL1Q9UK58 526 aaPredicted RBP35.2■■■■□ 3.23
MKRN1-216ENST00000498535 POLD1P28340 1107 aa35.19■■■■□ 3.22
MKRN1-216ENST00000498535 PNPLA7Q6ZV29 1317 aa35.19■■■■□ 3.22
MKRN1-216ENST00000498535 NSD3Q9BZ95 1437 aa35.19■■■■□ 3.22
MKRN1-216ENST00000498535 QSER1Q2KHR3 1735 aa35.18■■■■□ 3.22
MKRN1-216ENST00000498535 LY75O60449 1722 aa35.18■■■■□ 3.22
MKRN1-216ENST00000498535 MAP3K5Q99683 1374 aa35.17■■■■□ 3.22
MKRN1-216ENST00000498535 PCDH11XQ9BZA7 1347 aa35.17■■■■□ 3.22
MKRN1-216ENST00000498535 PCDH11YQ9BZA8 1340 aa35.17■■■■□ 3.22
MKRN1-216ENST00000498535 PPM1GO15355 546 aaPredicted RBP35.14■■■■□ 3.22
MKRN1-216ENST00000498535 EMILIN1Q9Y6C2 1016 aa35.14■■■■□ 3.22
MKRN1-216ENST00000498535 KLHL34Q8N239 644 aa35.13■■■■□ 3.21
MKRN1-216ENST00000498535 UTRNP46939 3433 aa35.12■■■■□ 3.21
MKRN1-216ENST00000498535 CLSPNQ9HAW4 1339 aa35.12■■■■□ 3.21
MKRN1-216ENST00000498535 PCGF6Q9BYE7 350 aa35.12■■■■□ 3.21
MKRN1-216ENST00000498535 MSH5O43196 834 aa35.1■■■■□ 3.21
MKRN1-216ENST00000498535 HMGB2P26583 209 aaKnown RBP35.1■■■■□ 3.21
MKRN1-216ENST00000498535 TUBGCP6Q96RT7 1819 aa35.09■■■■□ 3.21
MKRN1-216ENST00000498535 MPRIPQ6WCQ1 1025 aa35.07■■■■□ 3.2
MKRN1-216ENST00000498535 CYP27B1O15528 508 aa35.06■■■■□ 3.2
MKRN1-216ENST00000498535 GPR162Q16538 588 aa35.06■■■■□ 3.2
MKRN1-216ENST00000498535 POLR3GLQ9BT43 218 aa35.06■■■■□ 3.2
MKRN1-216ENST00000498535 WASHC2AQ641Q2 1341 aa35.03■■■■□ 3.2
MKRN1-216ENST00000498535 PALLDQ8WX93 1383 aa35.02■■■■□ 3.2
MKRN1-216ENST00000498535 COL24A1Q17RW2 1714 aa35.02■■■■□ 3.2
MKRN1-216ENST00000498535 COL23A1Q86Y22 540 aaPredicted RBP35.02■■■■□ 3.2
MKRN1-216ENST00000498535 ZNF784Q8NCA9 323 aaPredicted RBP35.02■■■■□ 3.2
MKRN1-216ENST00000498535 SPG7Q9UQ90 795 aa35.02■■■■□ 3.2
MKRN1-216ENST00000498535 CHD4Q14839 1912 aa35.01■■■■□ 3.2
MKRN1-216ENST00000498535 SMARCC1Q92922 1105 aaPredicted RBP35■■■■□ 3.19
MKRN1-216ENST00000498535 MAP2P11137 1827 aaKnown RBP34.98■■■■□ 3.19
MKRN1-216ENST00000498535 PELP1Q8IZL8 1130 aaKnown RBP34.98■■■■□ 3.19
MKRN1-216ENST00000498535 FLAD1Q8NFF5 587 aa34.97■■■■□ 3.19
MKRN1-216ENST00000498535 EYA1Q99502 592 aa34.97■■■■□ 3.19
MKRN1-216ENST00000498535 POLKQ9UBT6 870 aa34.97■■■■□ 3.19
MKRN1-216ENST00000498535 PKD1L3Q7Z443 1732 aa34.97■■■■□ 3.19
MKRN1-216ENST00000498535 NCAPD2Q15021 1401 aa34.97■■■■□ 3.19
MKRN1-216ENST00000498535 C5P01031 1676 aa34.96■■■■□ 3.19
MKRN1-216ENST00000498535 ANKRD26Q9UPS8 1709 aa34.96■■■■□ 3.19
MKRN1-216ENST00000498535 NKX1-1Q15270 411 aaPredicted RBP34.95■■■■□ 3.19
MKRN1-216ENST00000498535 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP34.94■■■■□ 3.18
MKRN1-216ENST00000498535 MSL1Q68DK7 614 aa34.93■■■■□ 3.18
MKRN1-216ENST00000498535 PIGBQ92521 554 aa34.93■■■■□ 3.18
MKRN1-216ENST00000498535 ITGB4P16144 1822 aa34.92■■■■□ 3.18
MKRN1-216ENST00000498535 TNNT2P45379 298 aaPredicted RBP34.92■■■■□ 3.18
MKRN1-216ENST00000498535 EIF4G2P78344 907 aaKnown RBP eCLIP34.92■■■■□ 3.18
MKRN1-216ENST00000498535 NLGN2Q8NFZ4 835 aa34.92■■■■□ 3.18
MKRN1-216ENST00000498535 TOGARAM1Q9Y4F4 1720 aa34.92■■■■□ 3.18
MKRN1-216ENST00000498535 AK7Q96M32 723 aa34.9■■■■□ 3.18
MKRN1-216ENST00000498535 GOLGB1Q14789 3259 aaKnown RBP34.9■■■■□ 3.18
MKRN1-216ENST00000498535 TAF1LQ8IZX4 1826 aa34.89■■■■□ 3.18
MKRN1-216ENST00000498535 TMOD3Q9NYL9 352 aa34.88■■■■□ 3.17
MKRN1-216ENST00000498535 IFNL2Q8IZJ0 200 aa34.87■■■■□ 3.17
MKRN1-216ENST00000498535 HSPA5P11021 654 aaKnown RBP34.86■■■■□ 3.17
MKRN1-216ENST00000498535 EIF4A2Q14240 407 aaKnown RBP34.86■■■■□ 3.17
MKRN1-216ENST00000498535 C4BP0C0L5 1744 aa34.84■■■■□ 3.17
MKRN1-216ENST00000498535 PHKG2P15735 406 aa34.84■■■■□ 3.17
MKRN1-216ENST00000498535 PANK3Q9H999 370 aa34.84■■■■□ 3.17
MKRN1-216ENST00000498535 LOC102724428A0A0B4J2F2 783 aa34.82■■■■□ 3.16
MKRN1-216ENST00000498535 SIK1P57059 783 aa34.82■■■■□ 3.16
MKRN1-216ENST00000498535 GRIN3BO60391 1043 aa34.81■■■■□ 3.16
MKRN1-216ENST00000498535 PHF14O94880 888 aa34.81■■■■□ 3.16
MKRN1-216ENST00000498535 ASAP1Q9ULH1 1129 aa34.79■■■■□ 3.16
MKRN1-216ENST00000498535 CD2APQ9Y5K6 639 aa34.79■■■■□ 3.16
MKRN1-216ENST00000498535 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP34.78■■■■□ 3.16
MKRN1-216ENST00000498535 CCER1Q8TC90 406 aaPredicted RBP34.78■■■■□ 3.16
MKRN1-216ENST00000498535 PLEKHG2Q9H7P9 1386 aa34.77■■■■□ 3.16
MKRN1-216ENST00000498535 SSFA2P28290 1259 aa34.76■■■■□ 3.16
MKRN1-216ENST00000498535 IGSF1Q8N6C5 1336 aa34.76■■■■□ 3.15
MKRN1-216ENST00000498535 YBX3P16989 372 aaKnown RBP eCLIP34.75■■■■□ 3.159e-7■□□□□ 8.7
MKRN1-216ENST00000498535 ATP6V1AP38606 617 aa34.75■■■■□ 3.15
MKRN1-216ENST00000498535 AMIGO3Q86WK7 504 aa34.75■■■■□ 3.15
MKRN1-216ENST00000498535 LINC00116Q8NCU8 138 aa34.75■■■■□ 3.15
MKRN1-216ENST00000498535 UBR3Q6ZT12 1888 aa34.73■■■■□ 3.15
MKRN1-216ENST00000498535 MORC1Q86VD1 984 aa34.73■■■■□ 3.15
MKRN1-216ENST00000498535 HSP90AB1P08238 724 aaKnown RBP34.72■■■■□ 3.15
MKRN1-216ENST00000498535 PLEKHO1Q53GL0 409 aaPredicted RBP34.72■■■■□ 3.15
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms