RNA–Protein interactions for RNA: ENST00000497638.2

VPS45-210, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,135 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-210ENST00000497638 STRCP1A6NGW2 1772 aa12.35□□□□□ -0.43
VPS45-210ENST00000497638 HLA-CQ95604 372 aa12.34□□□□□ -0.43
VPS45-210ENST00000497638 MBD5Q9P267 1494 aa12.34□□□□□ -0.43
VPS45-210ENST00000497638 KIF3BO15066 747 aa12.33□□□□□ -0.44
VPS45-210ENST00000497638 FAM217BQ9NTX9 383 aaPredicted RBP12.33□□□□□ -0.44
VPS45-210ENST00000497638 WASHC2CQ9Y4E1 1318 aa12.33□□□□□ -0.44
VPS45-210ENST00000497638 HOXA2O43364 376 aa12.32□□□□□ -0.44
VPS45-210ENST00000497638 NUTM1Q86Y26 1132 aa12.32□□□□□ -0.44
VPS45-210ENST00000497638 CYP4X1Q8N118 509 aa12.31□□□□□ -0.44
VPS45-210ENST00000497638 MTUS2Q5JR59 1369 aa12.3□□□□□ -0.44
VPS45-210ENST00000497638 TIAM1Q13009 1591 aa12.3□□□□□ -0.44
VPS45-210ENST00000497638 ZC3H13Q5T200 1668 aaKnown RBP12.3□□□□□ -0.44
VPS45-210ENST00000497638 MMP16P51512 607 aa12.3□□□□□ -0.44
VPS45-210ENST00000497638 CCDC141Q6ZP82 1450 aa12.29□□□□□ -0.44
VPS45-210ENST00000497638 GUCA2AQ02747 115 aa12.29□□□□□ -0.44
VPS45-210ENST00000497638 CCDC24Q8N4L8 307 aa12.29□□□□□ -0.44
VPS45-210ENST00000497638 ZNF644Q9H582 1327 aaPredicted RBP12.29□□□□□ -0.44
VPS45-210ENST00000497638 FAM135BQ49AJ0 1406 aa12.28□□□□□ -0.44
VPS45-210ENST00000497638 POTEAQ6S8J7 498 aa12.28□□□□□ -0.44
VPS45-210ENST00000497638 SCAF11Q99590 1463 aaKnown RBP12.27□□□□□ -0.44
VPS45-210ENST00000497638 EHBP1L1Q8N3D4 1523 aa12.27□□□□□ -0.45
VPS45-210ENST00000497638 DXOO77932 396 aaKnown RBP12.26□□□□□ -0.45
VPS45-210ENST00000497638 ERVK-7P63135 1459 aa12.26□□□□□ -0.45
VPS45-210ENST00000497638 XIRP1Q702N8 1843 aaKnown RBP12.25□□□□□ -0.45
VPS45-210ENST00000497638 TTC24A2A3L6 582 aaPredicted RBP12.25□□□□□ -0.45
VPS45-210ENST00000497638 ST8SIA5O15466 376 aa12.25□□□□□ -0.45
VPS45-210ENST00000497638 SSTR3P32745 418 aaPredicted RBP12.25□□□□□ -0.45
VPS45-210ENST00000497638 TRIM32Q13049 653 aa12.25□□□□□ -0.45
VPS45-210ENST00000497638 TTLL12Q14166 644 aaPredicted RBP12.25□□□□□ -0.45
VPS45-210ENST00000497638 BARGINQ6ZT62 677 aa12.25□□□□□ -0.45
VPS45-210ENST00000497638 SYMPKQ92797 1274 aaKnown RBP12.25□□□□□ -0.45
VPS45-210ENST00000497638 REPIN1Q9BWE0 567 aaKnown RBP12.25□□□□□ -0.45
VPS45-210ENST00000497638 TOR4AQ9NXH8 423 aa12.25□□□□□ -0.45
VPS45-210ENST00000497638 CEP162Q5TB80 1403 aa12.25□□□□□ -0.45
VPS45-210ENST00000497638 ABCC3O15438 1527 aa12.25□□□□□ -0.45
VPS45-210ENST00000497638 ZMYND10O75800 440 aa12.24□□□□□ -0.45
VPS45-210ENST00000497638 UBR1Q8IWV7 1749 aa12.24□□□□□ -0.45
VPS45-210ENST00000497638 AAASQ9NRG9 546 aa12.24□□□□□ -0.45
VPS45-210ENST00000497638 SLIT1O75093 1534 aa12.23□□□□□ -0.45
VPS45-210ENST00000497638 ARHGAP23Q9P227 1491 aa12.23□□□□□ -0.45
VPS45-210ENST00000497638 ZC3H15Q8WU90 426 aaKnown RBP12.23□□□□□ -0.45
VPS45-210ENST00000497638 SETD1AO15047 1707 aaKnown RBP12.23□□□□□ -0.45
VPS45-210ENST00000497638 CAMSAP2Q08AD1 1489 aa12.22□□□□□ -0.45
VPS45-210ENST00000497638 NCOA2Q15596 1464 aa12.21□□□□□ -0.45
VPS45-210ENST00000497638 LRRC9Q6ZRR7 1453 aa12.21□□□□□ -0.45
VPS45-210ENST00000497638 POTECB2RU33 542 aa12.21□□□□□ -0.45
VPS45-210ENST00000497638 FDX1P10109 184 aa12.21□□□□□ -0.45
VPS45-210ENST00000497638 ZNF775Q96BV0 537 aaPredicted RBP12.21□□□□□ -0.45
VPS45-210ENST00000497638 ARHGEF5Q12774 1597 aa12.21□□□□□ -0.46
VPS45-210ENST00000497638 ROBO1Q9Y6N7 1651 aa12.2□□□□□ -0.46
VPS45-210ENST00000497638 EIF2AK4Q9P2K8 1649 aaKnown RBP12.2□□□□□ -0.46
VPS45-210ENST00000497638 WNT7AO00755 349 aa12.2□□□□□ -0.46
VPS45-210ENST00000497638 JUNDP17535 347 aa12.2□□□□□ -0.46
VPS45-210ENST00000497638 TMEM94Q12767 1356 aa12.19□□□□□ -0.46
VPS45-210ENST00000497638 C6orf229H3BNL8 230 aa12.19□□□□□ -0.46
VPS45-210ENST00000497638 TXNDC2Q86VQ3 553 aa12.19□□□□□ -0.46
VPS45-210ENST00000497638 RETREG3Q86VR2 466 aa12.19□□□□□ -0.46
VPS45-210ENST00000497638 TSPY4P0CV99 314 aa12.18□□□□□ -0.46
VPS45-210ENST00000497638 TSPY10P0CW01 314 aa12.18□□□□□ -0.46
VPS45-210ENST00000497638 LTKP29376 864 aa12.18□□□□□ -0.46
VPS45-210ENST00000497638 SNIP1Q8TAD8 396 aaKnown RBP12.18□□□□□ -0.46
VPS45-210ENST00000497638 SPIRE2Q8WWL2 714 aa12.18□□□□□ -0.46
VPS45-210ENST00000497638 EID1Q9Y6B2 187 aa12.18□□□□□ -0.46
VPS45-210ENST00000497638 MAP3K1Q13233 1512 aa12.17□□□□□ -0.46
VPS45-210ENST00000497638 AXIN1O15169 862 aa12.17□□□□□ -0.46
VPS45-210ENST00000497638 AVPP01185 164 aa12.17□□□□□ -0.46
VPS45-210ENST00000497638 MRGPRX2Q96LB1 330 aa12.17□□□□□ -0.46
VPS45-210ENST00000497638 MROH1Q8NDA8 1641 aa12.17□□□□□ -0.46
VPS45-210ENST00000497638 JCADQ9P266 1359 aa12.17□□□□□ -0.46
VPS45-210ENST00000497638 AMHR2Q16671 573 aa12.16□□□□□ -0.46
VPS45-210ENST00000497638 PCDHGC3Q9UN70 934 aa12.16□□□□□ -0.46
VPS45-210ENST00000497638 MAST1Q9Y2H9 1570 aa12.16□□□□□ -0.46
VPS45-210ENST00000497638 CFAP65Q6ZU64 1925 aaKnown RBP12.15□□□□□ -0.46
VPS45-210ENST00000497638 NKTRP30414 1462 aaKnown RBP12.15□□□□□ -0.46
VPS45-210ENST00000497638 CEP152O94986 1710 aa12.15□□□□□ -0.46
VPS45-210ENST00000497638 ARHGAP31Q2M1Z3 1444 aa12.15□□□□□ -0.46
VPS45-210ENST00000497638 NDUFV2P19404 249 aa12.15□□□□□ -0.46
VPS45-210ENST00000497638 CTC1Q2NKJ3 1217 aa12.15□□□□□ -0.46
VPS45-210ENST00000497638 GIGYF2Q6Y7W6 1299 aaKnown RBP12.15□□□□□ -0.46
VPS45-210ENST00000497638 CRIPAKQ8N1N5 446 aa12.15□□□□□ -0.46
VPS45-210ENST00000497638 NUDT12Q9BQG2 462 aa12.15□□□□□ -0.46
VPS45-210ENST00000497638 KCNA6P17658 529 aa12.14□□□□□ -0.47
VPS45-210ENST00000497638 PRDM15P57071 1507 aaPredicted RBP12.14□□□□□ -0.47
VPS45-210ENST00000497638 TMEM2Q9UHN6 1383 aa12.14□□□□□ -0.47
VPS45-210ENST00000497638 PHLPP1O60346 1717 aa12.14□□□□□ -0.47
VPS45-210ENST00000497638 MOXD2PA6NHM9 499 aa12.13□□□□□ -0.47
VPS45-210ENST00000497638 RC3H1Q5TC82 1133 aaKnown RBP12.13□□□□□ -0.47
VPS45-210ENST00000497638 DACH1Q9UI36 760 aa12.13□□□□□ -0.47
VPS45-210ENST00000497638 NWD1Q149M9 1564 aa12.13□□□□□ -0.47
VPS45-210ENST00000497638 KDM5AP29375 1690 aaKnown RBP12.13□□□□□ -0.47
VPS45-210ENST00000497638 WNT7BP56706 349 aa12.12□□□□□ -0.47
VPS45-210ENST00000497638 PROSER2Q86WR7 435 aaPredicted RBP12.12□□□□□ -0.47
VPS45-210ENST00000497638 BEGAINQ9BUH8 593 aa12.12□□□□□ -0.47
VPS45-210ENST00000497638 MSH6P52701 1360 aa12.12□□□□□ -0.47
VPS45-210ENST00000497638 PIK3C2BO00750 1634 aa12.11□□□□□ -0.47
VPS45-210ENST00000497638 J3QL48 77 aa12.11□□□□□ -0.47
VPS45-210ENST00000497638 SMPD1P17405 629 aa12.11□□□□□ -0.47
VPS45-210ENST00000497638 SKOR1P84550 965 aa12.11□□□□□ -0.47
VPS45-210ENST00000497638 ZNF772Q68DY9 489 aaPredicted RBP12.11□□□□□ -0.47
VPS45-210ENST00000497638 EFCAB6Q5THR3 1501 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms