RNA–Protein interactions for RNA: ENST00000497318.1

SUPT20H-223, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 3

Gene SUPT20H, Length 734 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-223ENST00000497318 CD163L1Q9NR16 1453 aa23.47■■□□□ 1.35
SUPT20H-223ENST00000497318 USP54Q70EL1 1684 aa23.45■■□□□ 1.34
SUPT20H-223ENST00000497318 AMPHP49418 695 aa23.45■■□□□ 1.34
SUPT20H-223ENST00000497318 COG3Q96JB2 828 aa23.45■■□□□ 1.34
SUPT20H-223ENST00000497318 YBX3P16989 372 aaKnown RBP eCLIP23.44■■□□□ 1.341e-6■□□□□ 8.7
SUPT20H-223ENST00000497318 USP47Q96K76 1375 aa23.43■■□□□ 1.34
SUPT20H-223ENST00000497318 LTN1O94822 1766 aa23.43■■□□□ 1.34
SUPT20H-223ENST00000497318 GOLGB1Q14789 3259 aaKnown RBP23.43■■□□□ 1.34
SUPT20H-223ENST00000497318 QSER1Q2KHR3 1735 aa23.42■■□□□ 1.34
SUPT20H-223ENST00000497318 COL23A1Q86Y22 540 aaPredicted RBP23.42■■□□□ 1.34
SUPT20H-223ENST00000497318 FLAD1Q8NFF5 587 aa23.42■■□□□ 1.34
SUPT20H-223ENST00000497318 A0A1W2PP64 1363 aa23.41■■□□□ 1.34
SUPT20H-223ENST00000497318 HOXC9P31274 260 aa23.41■■□□□ 1.34
SUPT20H-223ENST00000497318 CD2APQ9Y5K6 639 aa23.41■■□□□ 1.34
SUPT20H-223ENST00000497318 CEP350Q5VT06 3117 aa23.41■■□□□ 1.34
SUPT20H-223ENST00000497318 CGNL1Q0VF96 1302 aa23.4■■□□□ 1.34
SUPT20H-223ENST00000497318 MAP3K19Q56UN5 1328 aa23.4■■□□□ 1.34
SUPT20H-223ENST00000497318 GPBP1L1Q9HC44 474 aaPredicted RBP23.39■■□□□ 1.33
SUPT20H-223ENST00000497318 NSD2O96028 1365 aa23.39■■□□□ 1.33
SUPT20H-223ENST00000497318 SLC24A1O60721 1099 aa23.38■■□□□ 1.33
SUPT20H-223ENST00000497318 MSL1Q68DK7 614 aa23.38■■□□□ 1.33
SUPT20H-223ENST00000497318 RAPGEF4Q8WZA2 1011 aa23.38■■□□□ 1.33
SUPT20H-223ENST00000497318 COL24A1Q17RW2 1714 aa23.38■■□□□ 1.33
SUPT20H-223ENST00000497318 ATP10DQ9P241 1426 aa23.36■■□□□ 1.33
SUPT20H-223ENST00000497318 FAM208AQ9UK61 1670 aaKnown RBP23.36■■□□□ 1.33
SUPT20H-223ENST00000497318 SHANK3Q9BYB0 1731 aa23.35■■□□□ 1.33
SUPT20H-223ENST00000497318 TATP17735 454 aaPredicted RBP23.33■■□□□ 1.33
SUPT20H-223ENST00000497318 NBPF6Q5VWK0 638 aa23.32■■□□□ 1.32
SUPT20H-223ENST00000497318 NBPF4Q96M43 638 aa23.32■■□□□ 1.32
SUPT20H-223ENST00000497318 RTL1A6NKG5 1358 aa23.31■■□□□ 1.32
SUPT20H-223ENST00000497318 MEGF6O75095 1541 aa23.31■■□□□ 1.32
SUPT20H-223ENST00000497318 SMG6Q86US8 1419 aaKnown RBP23.31■■□□□ 1.32
SUPT20H-223ENST00000497318 LY75O60449 1722 aa23.3■■□□□ 1.32
SUPT20H-223ENST00000497318 HSPA6P17066 643 aa23.3■■□□□ 1.32
SUPT20H-223ENST00000497318 FBLN1P23142 703 aa23.3■■□□□ 1.32
SUPT20H-223ENST00000497318 SMARCC1Q92922 1105 aaPredicted RBP23.3■■□□□ 1.32
SUPT20H-223ENST00000497318 DOT1LQ8TEK3 1739 aa23.29■■□□□ 1.32
SUPT20H-223ENST00000497318 AK7Q96M32 723 aa23.29■■□□□ 1.32
SUPT20H-223ENST00000497318 PCDH11XQ9BZA7 1347 aa23.29■■□□□ 1.32
SUPT20H-223ENST00000497318 PCDH11YQ9BZA8 1340 aa23.29■■□□□ 1.32
SUPT20H-223ENST00000497318 MPRIPQ6WCQ1 1025 aa23.28■■□□□ 1.32
SUPT20H-223ENST00000497318 TUBGCP6Q96RT7 1819 aa23.28■■□□□ 1.32
SUPT20H-223ENST00000497318 PALLDQ8WX93 1383 aa23.27■■□□□ 1.32
SUPT20H-223ENST00000497318 RRS1Q15050 365 aaKnown RBP23.27■■□□□ 1.32
SUPT20H-223ENST00000497318 USHBP1Q8N6Y0 703 aa23.27■■□□□ 1.32
SUPT20H-223ENST00000497318 ZNF526Q8TF50 670 aaPredicted RBP23.27■■□□□ 1.32
SUPT20H-223ENST00000497318 NSD3Q9BZ95 1437 aa23.24■■□□□ 1.31
SUPT20H-223ENST00000497318 ST20-MTHFSA0A0A6YYL1 179 aa23.23■■□□□ 1.31
SUPT20H-223ENST00000497318 TESK2Q96S53 571 aa23.23■■□□□ 1.31
SUPT20H-223ENST00000497318 ADCY9O60503 1353 aa23.23■■□□□ 1.31
SUPT20H-223ENST00000497318 TONSLQ96HA7 1378 aa23.23■■□□□ 1.31
SUPT20H-223ENST00000497318 FYB1O15117 783 aa23.22■■□□□ 1.31
SUPT20H-223ENST00000497318 GGNBP2Q9H3C7 697 aa23.22■■□□□ 1.31
SUPT20H-223ENST00000497318 IGSF1Q8N6C5 1336 aa23.22■■□□□ 1.31
SUPT20H-223ENST00000497318 INSRP06213 1382 aa23.2■■□□□ 1.3
SUPT20H-223ENST00000497318 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.2■■□□□ 1.3
SUPT20H-223ENST00000497318 PHF14O94880 888 aa23.2■■□□□ 1.3
SUPT20H-223ENST00000497318 SSFA2P28290 1259 aa23.19■■□□□ 1.3
SUPT20H-223ENST00000497318 HSP90AB2PQ58FF8 381 aa23.19■■□□□ 1.3
SUPT20H-223ENST00000497318 CYP27B1O15528 508 aa23.18■■□□□ 1.3
SUPT20H-223ENST00000497318 FLT4P35916 1363 aa23.17■■□□□ 1.3
SUPT20H-223ENST00000497318 KIF24Q5T7B8 1368 aa23.17■■□□□ 1.3
SUPT20H-223ENST00000497318 PIGBQ92521 554 aa23.17■■□□□ 1.3
SUPT20H-223ENST00000497318 C5P01031 1676 aa23.16■■□□□ 1.3
SUPT20H-223ENST00000497318 WWC3Q9ULE0 1092 aa23.16■■□□□ 1.3
SUPT20H-223ENST00000497318 SPG7Q9UQ90 795 aa23.16■■□□□ 1.3
SUPT20H-223ENST00000497318 LOC102724428A0A0B4J2F2 783 aa23.14■■□□□ 1.29
SUPT20H-223ENST00000497318 APLP1P51693 650 aa23.14■■□□□ 1.29
SUPT20H-223ENST00000497318 SIK1P57059 783 aa23.14■■□□□ 1.29
SUPT20H-223ENST00000497318 TMF1P82094 1093 aa23.14■■□□□ 1.29
SUPT20H-223ENST00000497318 NKX1-1Q15270 411 aaPredicted RBP23.13■■□□□ 1.29
SUPT20H-223ENST00000497318 RGPD2P0DJD1 1756 aa23.13■■□□□ 1.29
SUPT20H-223ENST00000497318 KIF3CO14782 793 aa23.12■■□□□ 1.29
SUPT20H-223ENST00000497318 CDCA8Q53HL2 280 aa23.12■■□□□ 1.29
SUPT20H-223ENST00000497318 AMIGO3Q86WK7 504 aa23.12■■□□□ 1.29
SUPT20H-223ENST00000497318 TMOD3Q9NYL9 352 aa23.12■■□□□ 1.29
SUPT20H-223ENST00000497318 C4BP0C0L5 1744 aa23.11■■□□□ 1.29
SUPT20H-223ENST00000497318 GNPATO15228 680 aa23.11■■□□□ 1.29
SUPT20H-223ENST00000497318 SMIM5Q71RC9 77 aa23.1■■□□□ 1.29
SUPT20H-223ENST00000497318 LINC00116Q8NCU8 138 aa23.1■■□□□ 1.29
SUPT20H-223ENST00000497318 ATP6V1AP38606 617 aa23.09■■□□□ 1.29
SUPT20H-223ENST00000497318 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.09■■□□□ 1.297e-7■■■□□ 17.3
SUPT20H-223ENST00000497318 MMP10P09238 476 aa23.08■■□□□ 1.29
SUPT20H-223ENST00000497318 TGFB2P61812 414 aa23.08■■□□□ 1.29
SUPT20H-223ENST00000497318 PPM1GO15355 546 aaPredicted RBP23.07■■□□□ 1.28
SUPT20H-223ENST00000497318 TOMM70O94826 608 aa23.07■■□□□ 1.28
SUPT20H-223ENST00000497318 NLGN1Q8N2Q7 840 aa23.07■■□□□ 1.28
SUPT20H-223ENST00000497318 TAF1LQ8IZX4 1826 aa23.06■■□□□ 1.28
SUPT20H-223ENST00000497318 ASAP1Q9ULH1 1129 aa23.06■■□□□ 1.28
SUPT20H-223ENST00000497318 TRAPPC3LQ5T215 181 aa23.05■■□□□ 1.28
SUPT20H-223ENST00000497318 BCS1LQ9Y276 419 aa23.05■■□□□ 1.28
SUPT20H-223ENST00000497318 ARHGAP27Q6ZUM4 889 aa23.04■■□□□ 1.28
SUPT20H-223ENST00000497318 IFNL2Q8IZJ0 200 aa23.04■■□□□ 1.28
SUPT20H-223ENST00000497318 RTCBQ9Y3I0 505 aaKnown RBP23.04■■□□□ 1.28
SUPT20H-223ENST00000497318 EMILIN1Q9Y6C2 1016 aa23.04■■□□□ 1.28
SUPT20H-223ENST00000497318 ITPK1Q13572 414 aa23.03■■□□□ 1.28
SUPT20H-223ENST00000497318 A0A0G2JLW4 131 aa23.01■■□□□ 1.27
SUPT20H-223ENST00000497318 CCDC87Q9NVE4 849 aa23.01■■□□□ 1.27
SUPT20H-223ENST00000497318 WASHC2AQ641Q2 1341 aa23.01■■□□□ 1.27
SUPT20H-223ENST00000497318 UBR3Q6ZT12 1888 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms